| Definition | Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequence. |
|---|---|
| Accession | NC_009784 |
| Length | 2,204,018 |
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The map label for this gene is frwC [H]
Identifier: 156976415
GI number: 156976415
Start: 444538
End: 446409
Strand: Direct
Name: frwC [H]
Synonym: VIBHAR_05188
Alternate gene names: 156976415
Gene position: 444538-446409 (Clockwise)
Preceding gene: 156976412
Following gene: 156976416
Centisome position: 20.17
GC content: 50.64
Gene sequence:
>1872_bases ATGGACATATTAAACTTTATTGAGCTGGAAAACATTTGCTTGGATTTGCAGGCTCAAACCAAAGATGAAGCGCTCAAAGA GCTCGTCGAATTGTTGGACGCGGCGGGTAAGCTCACTAGCAAAAGTCAGTTCTTGGCGGACATTTGGAAACGAGAAGAGA TTGGCAATACCGGCTTTGACGAGGGTATTGCCATTCCTCACGCCAAAAGTAACGCGGTTGCCAAACCCGCAGTCGCAGTG GGCATCAGCCGAAAAGGGATTGATTATGGTGCCGATGACGGCGAACTGTCTGACGTATTTTTCATGCTGGCTTCTCCGGA TGGGGACGACCATCACCACATTGAAGTCTTGGCACAAATTTCTACCAAAATCATTGAAGATGGTTTCGTCAATAAGTTAA AAGCGGCGGAGTCGGTGGAGGAAGCGCGCGAGCTACTTACTGATATTCAATCGAACACGAATGACTCTGGTATCGATCCT TTAGAATTTGCGTCTGAGCCACCCAGCCCTTGGGCGCAAAAGCTCGGCAGAATGAAAGAACACTTGCTGTTTGGTACCTC TCATATGATTCCGTTTATTGTCGTGGGCGGCGTGTTGTTGTCTCTGTCTGTGATGATTTCAGGCCATGGTGGCGTTCCGG AAGAGGGGATACTGGCAGATATCGCTGAGATGGGTATCGCTGGTTTGACGCTGTTTACCGCGGTATTGGGTGGTTATATT GCCTATTCGATGGCGGATAAGCCGGGTTTGGCTCCGGGTATGATTGGCTCATGGATTGCGGTTAGTCACTACAATACTGG CTTCTTGGGCGCGATTGTGGTCGGATTTTTCGCCGGCTTTGTGGTTTGGCTGCTGAAGAAGATTCAACTGCCGGACAGCA TGAGCTCCCTTAGCTCGATCTTTATCTACCCACTGGTTGGTACGTTTGTTACCTGTGGCGCAGTGATGTGGGTGATTGGC TCACCTATCGCCAGCGCAATGACGACCATGAACGATGTGCTCACAGGTATGGCGGGCTCAGGCAAAGTGATGTTGGGCAC CGTACTAGGCGCAATGACTGCGTTTGACATGGGCGGCCCTATCAACAAAGTGGCGACTTTGTTTGCTCAAACACAGGTAA ATACTCAGCCGTGGCTAATGGGTGGTGTCGGTATTGCGATCTGTACTCCGCCTTTGGGTATGGCATTAGCGACTTTCCTA TCGCCAAGTAAGTTTAAACGTGATGAGCGTGAGGCGGGTAAAGCGGCGGGCATCATGGGCATGATAGGCATCAGTGAAGG GGCGATTCCGTTTGCTGCCGCTGACCCAGCTCGCGTACTGCCTGCGATTGTTGCTGGTGGCATAGTTGGTAACGTGATTG GTTTTATGTTCCATGTCATTAACCATGCGCCGTGGGGCGGCTGGATTGTACTGCCTGTTGTGGATGGCAAGATTGGCTAC ATTGTCGGCACAATCGCAGGCTCGTTTACCACAGCATTGATTGTTATTGCGCTTAAGAAGACCGTCACAGAAGACGACAG TCCGGTTGGGCAATCTCAAGCTTATACGTCTGTGCAAGGCGAGGGCGAAGCAGACATTCTTGCCGTGACGTCTTGCCCAT CTGGTGTCGCGCACACCTTCTTAGCGGCGAAGTCATTAGAGAAAGCTGCCTGTGCGTTAGGCATTAAGATCAAGGTCGAA ACGCAAGGAGCGAACGGCATCATTAACCGAATCACTGACAAAGATATCGCCAAGGCTAGGTTTGTTGTCTTTGCTCACGA TGTAGCCATCAAAGAGCCGGAGCGCTTCAGAAAAATGAAGGTGCTGGATGTCAGCACTAAAGACGCGATGCTCAATGCTG CAGCACTGTTGCAGGCGAAAAGAATCCCTTAA
Upstream 100 bases:
>100_bases TCCTGTATTGGAAAGGACTAGTGTTGGTTACTCTGTACACAGTCATAGATGGAACAGATAACTCATGACTCTCGAGCGTT AACATTGCAAGGTACAAACA
Downstream 100 bases:
>100_bases GTATGTAGCTCCCTAACTAAGGCTATCTGCTCGTTAGCTCCATCATTTTTGATGGAGCTTTTTTTATCCCTGCGAAAAGT GCCGCTATGTTTTTTGGTTG
Product: PTS system fructose-specific IIABC component
Products: protein histidine; sugar phosphate
Alternate protein names: PTS system fructose-like EIIC component 2 [H]
Number of amino acids: Translated: 623; Mature: 623
Protein sequence:
>623_residues MDILNFIELENICLDLQAQTKDEALKELVELLDAAGKLTSKSQFLADIWKREEIGNTGFDEGIAIPHAKSNAVAKPAVAV GISRKGIDYGADDGELSDVFFMLASPDGDDHHHIEVLAQISTKIIEDGFVNKLKAAESVEEARELLTDIQSNTNDSGIDP LEFASEPPSPWAQKLGRMKEHLLFGTSHMIPFIVVGGVLLSLSVMISGHGGVPEEGILADIAEMGIAGLTLFTAVLGGYI AYSMADKPGLAPGMIGSWIAVSHYNTGFLGAIVVGFFAGFVVWLLKKIQLPDSMSSLSSIFIYPLVGTFVTCGAVMWVIG SPIASAMTTMNDVLTGMAGSGKVMLGTVLGAMTAFDMGGPINKVATLFAQTQVNTQPWLMGGVGIAICTPPLGMALATFL SPSKFKRDEREAGKAAGIMGMIGISEGAIPFAAADPARVLPAIVAGGIVGNVIGFMFHVINHAPWGGWIVLPVVDGKIGY IVGTIAGSFTTALIVIALKKTVTEDDSPVGQSQAYTSVQGEGEADILAVTSCPSGVAHTFLAAKSLEKAACALGIKIKVE TQGANGIINRITDKDIAKARFVVFAHDVAIKEPERFRKMKVLDVSTKDAMLNAAALLQAKRIP
Sequences:
>Translated_623_residues MDILNFIELENICLDLQAQTKDEALKELVELLDAAGKLTSKSQFLADIWKREEIGNTGFDEGIAIPHAKSNAVAKPAVAV GISRKGIDYGADDGELSDVFFMLASPDGDDHHHIEVLAQISTKIIEDGFVNKLKAAESVEEARELLTDIQSNTNDSGIDP LEFASEPPSPWAQKLGRMKEHLLFGTSHMIPFIVVGGVLLSLSVMISGHGGVPEEGILADIAEMGIAGLTLFTAVLGGYI AYSMADKPGLAPGMIGSWIAVSHYNTGFLGAIVVGFFAGFVVWLLKKIQLPDSMSSLSSIFIYPLVGTFVTCGAVMWVIG SPIASAMTTMNDVLTGMAGSGKVMLGTVLGAMTAFDMGGPINKVATLFAQTQVNTQPWLMGGVGIAICTPPLGMALATFL SPSKFKRDEREAGKAAGIMGMIGISEGAIPFAAADPARVLPAIVAGGIVGNVIGFMFHVINHAPWGGWIVLPVVDGKIGY IVGTIAGSFTTALIVIALKKTVTEDDSPVGQSQAYTSVQGEGEADILAVTSCPSGVAHTFLAAKSLEKAACALGIKIKVE TQGANGIINRITDKDIAKARFVVFAHDVAIKEPERFRKMKVLDVSTKDAMLNAAALLQAKRIP >Mature_623_residues MDILNFIELENICLDLQAQTKDEALKELVELLDAAGKLTSKSQFLADIWKREEIGNTGFDEGIAIPHAKSNAVAKPAVAV GISRKGIDYGADDGELSDVFFMLASPDGDDHHHIEVLAQISTKIIEDGFVNKLKAAESVEEARELLTDIQSNTNDSGIDP LEFASEPPSPWAQKLGRMKEHLLFGTSHMIPFIVVGGVLLSLSVMISGHGGVPEEGILADIAEMGIAGLTLFTAVLGGYI AYSMADKPGLAPGMIGSWIAVSHYNTGFLGAIVVGFFAGFVVWLLKKIQLPDSMSSLSSIFIYPLVGTFVTCGAVMWVIG SPIASAMTTMNDVLTGMAGSGKVMLGTVLGAMTAFDMGGPINKVATLFAQTQVNTQPWLMGGVGIAICTPPLGMALATFL SPSKFKRDEREAGKAAGIMGMIGISEGAIPFAAADPARVLPAIVAGGIVGNVIGFMFHVINHAPWGGWIVLPVVDGKIGY IVGTIAGSFTTALIVIALKKTVTEDDSPVGQSQAYTSVQGEGEADILAVTSCPSGVAHTFLAAKSLEKAACALGIKIKVE TQGANGIINRITDKDIAKARFVVFAHDVAIKEPERFRKMKVLDVSTKDAMLNAAALLQAKRIP
Specific function: The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane [H]
COG id: COG1299
COG function: function code G; Phosphotransferase system, fructose-specific IIC component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PTS EIIC type-2 domain [H]
Homologues:
Organism=Escherichia coli, GI1790386, Length=313, Percent_Identity=45.6869009584665, Blast_Score=269, Evalue=3e-73, Organism=Escherichia coli, GI1788492, Length=330, Percent_Identity=41.5151515151515, Blast_Score=217, Evalue=2e-57, Organism=Escherichia coli, GI1786951, Length=346, Percent_Identity=30.9248554913295, Blast_Score=152, Evalue=7e-38, Organism=Escherichia coli, GI87082348, Length=372, Percent_Identity=30.1075268817204, Blast_Score=143, Evalue=4e-35, Organism=Escherichia coli, GI1788729, Length=370, Percent_Identity=28.6486486486486, Blast_Score=119, Evalue=6e-28, Organism=Escherichia coli, GI1788730, Length=93, Percent_Identity=43.010752688172, Blast_Score=89, Evalue=6e-19, Organism=Escherichia coli, GI1790387, Length=92, Percent_Identity=47.8260869565217, Blast_Score=87, Evalue=2e-18, Organism=Escherichia coli, GI2367327, Length=128, Percent_Identity=30.46875, Blast_Score=75, Evalue=1e-14, Organism=Escherichia coli, GI1788726, Length=145, Percent_Identity=28.9655172413793, Blast_Score=71, Evalue=2e-13, Organism=Escherichia coli, GI1790390, Length=82, Percent_Identity=40.2439024390244, Blast_Score=66, Evalue=8e-12, Organism=Escherichia coli, GI1789597, Length=143, Percent_Identity=30.0699300699301, Blast_Score=66, Evalue=8e-12, Organism=Escherichia coli, GI48994992, Length=137, Percent_Identity=27.007299270073, Blast_Score=63, Evalue=6e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013014 - InterPro: IPR006327 [H]
Pfam domain/function: NA
EC number: 2.7.1.69
Molecular weight: Translated: 65582; Mature: 65582
Theoretical pI: Translated: 5.04; Mature: 5.04
Prosite motif: PS51094 PTS_EIIA_TYPE_2 ; PS51099 PTS_EIIB_TYPE_2 ; PS51104 PTS_EIIC_TYPE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDILNFIELENICLDLQAQTKDEALKELVELLDAAGKLTSKSQFLADIWKREEIGNTGFD CCHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCC EGIAIPHAKSNAVAKPAVAVGISRKGIDYGADDGELSDVFFMLASPDGDDHHHIEVLAQI CCEECCCCCCCCCCCCHHEEECCCCCCCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHH STKIIEDGFVNKLKAAESVEEARELLTDIQSNTNDSGIDPLEFASEPPSPWAQKLGRMKE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCCCCHHHHHHHHHHH HLLFGTSHMIPFIVVGGVLLSLSVMISGHGGVPEEGILADIAEMGIAGLTLFTAVLGGYI HHHHCCHHHHHHHHHHHHHHHHHHHEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH AYSMADKPGLAPGMIGSWIAVSHYNTGFLGAIVVGFFAGFVVWLLKKIQLPDSMSSLSSI HHHCCCCCCCCCCHHHCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH FIYPLVGTFVTCGAVMWVIGSPIASAMTTMNDVLTGMAGSGKVMLGTVLGAMTAFDMGGP HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCC INKVATLFAQTQVNTQPWLMGGVGIAICTPPLGMALATFLSPSKFKRDEREAGKAAGIMG HHHHHHHHHHHCCCCCCEEECCCEEEEECCCHHHHHHHHCCCHHHCCHHHHHHHHHCEEE MIGISEGAIPFAAADPARVLPAIVAGGIVGNVIGFMFHVINHAPWGGWIVLPVVDGKIGY EEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCHH IVGTIAGSFTTALIVIALKKTVTEDDSPVGQSQAYTSVQGEGEADILAVTSCPSGVAHTF HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHCCCCCCCCCEEEEECCCCHHHHHH LAAKSLEKAACALGIKIKVETQGANGIINRITDKDIAKARFVVFAHDVAIKEPERFRKMK HHHHHHHHHHHHEEEEEEEEECCCCCHHHHCCCHHHHHHEEEEEEECHHHCCHHHHHHEE VLDVSTKDAMLNAAALLQAKRIP EEECCHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MDILNFIELENICLDLQAQTKDEALKELVELLDAAGKLTSKSQFLADIWKREEIGNTGFD CCHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCC EGIAIPHAKSNAVAKPAVAVGISRKGIDYGADDGELSDVFFMLASPDGDDHHHIEVLAQI CCEECCCCCCCCCCCCHHEEECCCCCCCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHH STKIIEDGFVNKLKAAESVEEARELLTDIQSNTNDSGIDPLEFASEPPSPWAQKLGRMKE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCCCCHHHHHHHHHHH HLLFGTSHMIPFIVVGGVLLSLSVMISGHGGVPEEGILADIAEMGIAGLTLFTAVLGGYI HHHHCCHHHHHHHHHHHHHHHHHHHEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH AYSMADKPGLAPGMIGSWIAVSHYNTGFLGAIVVGFFAGFVVWLLKKIQLPDSMSSLSSI HHHCCCCCCCCCCHHHCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH FIYPLVGTFVTCGAVMWVIGSPIASAMTTMNDVLTGMAGSGKVMLGTVLGAMTAFDMGGP HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCC INKVATLFAQTQVNTQPWLMGGVGIAICTPPLGMALATFLSPSKFKRDEREAGKAAGIMG HHHHHHHHHHHCCCCCCEEECCCEEEEECCCHHHHHHHHCCCHHHCCHHHHHHHHHCEEE MIGISEGAIPFAAADPARVLPAIVAGGIVGNVIGFMFHVINHAPWGGWIVLPVVDGKIGY EEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCHH IVGTIAGSFTTALIVIALKKTVTEDDSPVGQSQAYTSVQGEGEADILAVTSCPSGVAHTF HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHCCCCCCCCCEEEEECCCCHHHHHH LAAKSLEKAACALGIKIKVETQGANGIINRITDKDIAKARFVVFAHDVAIKEPERFRKMK HHHHHHHHHHHHEEEEEEEEECCCCCHHHHCCCHHHHHHEEEEEEECHHHCCHHHHHHEE VLDVSTKDAMLNAAALLQAKRIP EEECCHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: protein N(pi)-phosphohistidine; sugar
Specific reaction: protein N(pi)-phosphohistidine + sugar = protein histidine + sugar phosphate
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8265357; 9278503; 7773398 [H]