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The map label for this gene is yniC [C]

Identifier: 156976401

GI number: 156976401

Start: 431210

End: 431980

Strand: Reverse

Name: yniC [C]

Synonym: VIBHAR_05174

Alternate gene names: 156976401

Gene position: 431980-431210 (Counterclockwise)

Preceding gene: 156976402

Following gene: 156976400

Centisome position: 19.6

GC content: 46.43

Gene sequence:

>771_bases
ATGGAACAGCACTTGCCCACTTTTGTCTTTATTCGACCAAAAGTTGATGATGATCGAATTGCACAAGAAAATCGATTCCG
CTTATGTCAAAATGCGCCATCTCAATCGACAAGTCATAACGTAATGAATTATCAAGCTGCTATTTTCGATATGGATGGAC
TGCTCCTCGATACGGAGCGAGTGTGCATGCGCATTTTCCAAGAAGCGTGTGAGGCACAAAGCCTCCCATTCTACAAAGAC
GTTTACCTTTCAATCATTGGTCGCAACGCGGCGGGCATTGAGGTCATTTTCCGCAAAGCTTACGGTGATGATTTAGATCG
CCTTCATCACGAATGGCGCACTCGCTACGATGCGGTTGTAAAACATCAAGCCATTCCAGTAAAAGAAGGCGTGGTAGAAC
TGCTTGAGTGGCTAAAACAGCAAGGTTTACCCATTGCCGTTGCGACTTCTACTGCAAAAGAAGTGGCGAGAAAAAAGTTG
GAGCTGGCGGGTTTGAGCAAGTATTTCGACAACTTAACCACGGGCTGTGAGGTCTCACATGGAAAGCCAGATCCAGAGAT
CTATCTGCTTGCAGCAAGTCGACTAAACGTTGACCCAACCAAATGTCTTGCCTTTGAAGATTCCAATAATGGCGTACGCT
CTGCGGTAGCAGCTAACATGGTCACTTTCCAAATCCCAGACCTTGTTGAGCCTTGCGCAGAAGTGCGTGATTTTGGCCAT
GCGATCGTTCCTTCACTGCATGACGCATTATTCGAGCTTAAAAAAGCGTAG

Upstream 100 bases:

>100_bases
ACGGATCTCTGCTCTTCTGCCTATTTTAATAGATTGTCGTAAATGTTTCTTCCCGACGAATTAGCGCAATATCGATTTCA
GTATTAAATTATTTTTTCGT

Downstream 100 bases:

>100_bases
CCCGTTTCCGCTCATCTAAGTTCAGAACAACGAAAAACGCACTCTCCATTGAGAGTGCGTTTTGCTTTTAGCCCACTAGC
ATCTCTGACGAATCAAGAGA

Product: phosphoglycolate phosphatase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 256; Mature: 256

Protein sequence:

>256_residues
MEQHLPTFVFIRPKVDDDRIAQENRFRLCQNAPSQSTSHNVMNYQAAIFDMDGLLLDTERVCMRIFQEACEAQSLPFYKD
VYLSIIGRNAAGIEVIFRKAYGDDLDRLHHEWRTRYDAVVKHQAIPVKEGVVELLEWLKQQGLPIAVATSTAKEVARKKL
ELAGLSKYFDNLTTGCEVSHGKPDPEIYLLAASRLNVDPTKCLAFEDSNNGVRSAVAANMVTFQIPDLVEPCAEVRDFGH
AIVPSLHDALFELKKA

Sequences:

>Translated_256_residues
MEQHLPTFVFIRPKVDDDRIAQENRFRLCQNAPSQSTSHNVMNYQAAIFDMDGLLLDTERVCMRIFQEACEAQSLPFYKD
VYLSIIGRNAAGIEVIFRKAYGDDLDRLHHEWRTRYDAVVKHQAIPVKEGVVELLEWLKQQGLPIAVATSTAKEVARKKL
ELAGLSKYFDNLTTGCEVSHGKPDPEIYLLAASRLNVDPTKCLAFEDSNNGVRSAVAANMVTFQIPDLVEPCAEVRDFGH
AIVPSLHDALFELKKA
>Mature_256_residues
MEQHLPTFVFIRPKVDDDRIAQENRFRLCQNAPSQSTSHNVMNYQAAIFDMDGLLLDTERVCMRIFQEACEAQSLPFYKD
VYLSIIGRNAAGIEVIFRKAYGDDLDRLHHEWRTRYDAVVKHQAIPVKEGVVELLEWLKQQGLPIAVATSTAKEVARKKL
ELAGLSKYFDNLTTGCEVSHGKPDPEIYLLAASRLNVDPTKCLAFEDSNNGVRSAVAANMVTFQIPDLVEPCAEVRDFGH
AIVPSLHDALFELKKA

Specific function: Displays high phosphatase activity toward erythrose 4- phosphate, fructose 6-phosphate, 2-deoxyglucose 6-phosphate, and mannose 6-phosphate. May have a role in the intracellular metabolism of many phosphorylated carbohydrates [H]

COG id: COG0637

COG function: function code R; Predicted phosphatase/phosphohexomutase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the HAD-like hydrolase superfamily [H]

Homologues:

Organism=Homo sapiens, GI197382691, Length=207, Percent_Identity=35.7487922705314, Blast_Score=101, Evalue=6e-22,
Organism=Homo sapiens, GI296011030, Length=205, Percent_Identity=32.6829268292683, Blast_Score=87, Evalue=1e-17,
Organism=Homo sapiens, GI207113149, Length=230, Percent_Identity=32.1739130434783, Blast_Score=87, Evalue=1e-17,
Organism=Homo sapiens, GI296011028, Length=177, Percent_Identity=33.3333333333333, Blast_Score=74, Evalue=1e-13,
Organism=Escherichia coli, GI1788021, Length=212, Percent_Identity=27.8301886792453, Blast_Score=82, Evalue=4e-17,
Organism=Escherichia coli, GI1789046, Length=183, Percent_Identity=31.1475409836066, Blast_Score=82, Evalue=4e-17,
Organism=Escherichia coli, GI87082080, Length=183, Percent_Identity=30.0546448087432, Blast_Score=63, Evalue=2e-11,
Organism=Drosophila melanogaster, GI116008157, Length=192, Percent_Identity=34.375, Blast_Score=94, Evalue=9e-20,
Organism=Drosophila melanogaster, GI17137324, Length=186, Percent_Identity=30.1075268817204, Blast_Score=79, Evalue=2e-15,
Organism=Drosophila melanogaster, GI45550911, Length=204, Percent_Identity=27.9411764705882, Blast_Score=75, Evalue=5e-14,
Organism=Drosophila melanogaster, GI20129151, Length=191, Percent_Identity=30.3664921465969, Blast_Score=68, Evalue=6e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005834
- InterPro:   IPR023214
- InterPro:   IPR006439
- InterPro:   IPR006402
- InterPro:   IPR005833 [H]

Pfam domain/function: PF00702 Hydrolase [H]

EC number: NA

Molecular weight: Translated: 28833; Mature: 28833

Theoretical pI: Translated: 5.86; Mature: 5.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEQHLPTFVFIRPKVDDDRIAQENRFRLCQNAPSQSTSHNVMNYQAAIFDMDGLLLDTER
CCCCCCEEEEEECCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHEEEEEECCCEEECHHH
VCMRIFQEACEAQSLPFYKDVYLSIIGRNAAGIEVIFRKAYGDDLDRLHHEWRTRYDAVV
HHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHH
KHQAIPVKEGVVELLEWLKQQGLPIAVATSTAKEVARKKLELAGLSKYFDNLTTGCEVSH
HHCCCCHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
GKPDPEIYLLAASRLNVDPTKCLAFEDSNNGVRSAVAANMVTFQIPDLVEPCAEVRDFGH
CCCCCCEEEEEECCCCCCHHHEEEEECCCCCHHHHHHHHHHEEECHHHHHHHHHHHHCCH
AIVPSLHDALFELKKA
HHHHHHHHHHHHHHCC
>Mature Secondary Structure
MEQHLPTFVFIRPKVDDDRIAQENRFRLCQNAPSQSTSHNVMNYQAAIFDMDGLLLDTER
CCCCCCEEEEEECCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHEEEEEECCCEEECHHH
VCMRIFQEACEAQSLPFYKDVYLSIIGRNAAGIEVIFRKAYGDDLDRLHHEWRTRYDAVV
HHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHH
KHQAIPVKEGVVELLEWLKQQGLPIAVATSTAKEVARKKLELAGLSKYFDNLTTGCEVSH
HHCCCCHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
GKPDPEIYLLAASRLNVDPTKCLAFEDSNNGVRSAVAANMVTFQIPDLVEPCAEVRDFGH
CCCCCCEEEEEECCCCCCHHHEEEEECCCCCHHHHHHHHHHEEECHHHHHHHHHHHHCCH
AIVPSLHDALFELKKA
HHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10360571 [H]