| Definition | Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequence. |
|---|---|
| Accession | NC_009784 |
| Length | 2,204,018 |
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The map label for this gene is 156976396
Identifier: 156976396
GI number: 156976396
Start: 423613
End: 424065
Strand: Reverse
Name: 156976396
Synonym: VIBHAR_05169
Alternate gene names: NA
Gene position: 424065-423613 (Counterclockwise)
Preceding gene: 156976400
Following gene: 156976386
Centisome position: 19.24
GC content: 48.12
Gene sequence:
>453_bases ATGTCTTTACGTTTAGTAGCAGCAACCTTTGCACTAGTTGGAATGAGCTTTGGCGCACAAGCCAATGCGGAGTGTGAAGT GTCCATCGATGCTAACGATATGATGCAGTTTTCGACCAAGACACTGAGCGTACCAGCGACGTGTAAAGAAGTGAAACTGA CGCTGAACCACACTGGTAAGATGCCGGCACAGTCAATGGGTCACAACGTTGTGATTACAGATACGGCTAACCTTCAAGCG GTGGGTACAGATGGGATGTCTGCGGGCCTTGATAACAACTACGTGAAACCAAACGACGACCGAGTTTATGCCTTCACTAA AGTAGTGGGCGGCGGTGAAAGCACTTCTATCACCTTCAGCACAGAGAAAATGACTCCGGGAGGCGACTACTCGTTCTTAT GTTCTTTCCCTGGTCACTGGGCAATCATGCAAGGTAAATTCGAGTTCAAGTAA
Upstream 100 bases:
>100_bases GTTCAAAGCACGGTTTCAAACAGAATATTTGATGATAATGAGATGCATTGGATCGGTTTGAATCCAAGTCAGCCCAAAAA TACAATATGGAGAGTGTTAT
Downstream 100 bases:
>100_bases ACACATCTACATCTAGATGACCCAATTTGAGATTGGGGCACACAGATGTCTTATTTGAACCTAAAGAAAAGGGAAGCATT TCGCTTCCCTTTTTGGTGCT
Product: azurin
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 150; Mature: 149
Protein sequence:
>150_residues MSLRLVAATFALVGMSFGAQANAECEVSIDANDMMQFSTKTLSVPATCKEVKLTLNHTGKMPAQSMGHNVVITDTANLQA VGTDGMSAGLDNNYVKPNDDRVYAFTKVVGGGESTSITFSTEKMTPGGDYSFLCSFPGHWAIMQGKFEFK
Sequences:
>Translated_150_residues MSLRLVAATFALVGMSFGAQANAECEVSIDANDMMQFSTKTLSVPATCKEVKLTLNHTGKMPAQSMGHNVVITDTANLQA VGTDGMSAGLDNNYVKPNDDRVYAFTKVVGGGESTSITFSTEKMTPGGDYSFLCSFPGHWAIMQGKFEFK >Mature_149_residues SLRLVAATFALVGMSFGAQANAECEVSIDANDMMQFSTKTLSVPATCKEVKLTLNHTGKMPAQSMGHNVVITDTANLQAV GTDGMSAGLDNNYVKPNDDRVYAFTKVVGGGESTSITFSTEKMTPGGDYSFLCSFPGHWAIMQGKFEFK
Specific function: Transfers electrons from cytochrome c551 to cytochrome oxidase. Transfers electrons from the tryptophan tryptophylquinone of the aromatic amine dehydrogenase heterotetramer [H]
COG id: COG3241
COG function: function code C; Azurin
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 plastocyanin-like domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014068 - InterPro: IPR000923 - InterPro: IPR008972 [H]
Pfam domain/function: PF00127 Copper-bind [H]
EC number: NA
Molecular weight: Translated: 16035; Mature: 15904
Theoretical pI: Translated: 5.61; Mature: 5.61
Prosite motif: PS00196 COPPER_BLUE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 6.0 %Met (Translated Protein) 8.0 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 5.4 %Met (Mature Protein) 7.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLRLVAATFALVGMSFGAQANAECEVSIDANDMMQFSTKTLSVPATCKEVKLTLNHTGK CCEEHHHHHHHHHHHCCCCCCCCEEEEEECHHHHEEECCEEEECCCCCEEEEEEECCCCC MPAQSMGHNVVITDTANLQAVGTDGMSAGLDNNYVKPNDDRVYAFTKVVGGGESTSITFS CCHHHCCCEEEEEECCCEEEECCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCEEEEE TEKMTPGGDYSFLCSFPGHWAIMQGKFEFK ECCCCCCCCEEEEECCCCCEEEEECEEECC >Mature Secondary Structure SLRLVAATFALVGMSFGAQANAECEVSIDANDMMQFSTKTLSVPATCKEVKLTLNHTGK CEEHHHHHHHHHHHCCCCCCCCEEEEEECHHHHEEECCEEEECCCCCEEEEEEECCCCC MPAQSMGHNVVITDTANLQAVGTDGMSAGLDNNYVKPNDDRVYAFTKVVGGGESTSITFS CCHHHCCCEEEEEECCCEEEECCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCEEEEE TEKMTPGGDYSFLCSFPGHWAIMQGKFEFK ECCCCCCCCEEEEECCCCCEEEEECEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA