The gene/protein map for NC_003888 is currently unavailable.
Definition Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequence.
Accession NC_009784
Length 2,204,018

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The map label for this gene is 156976344

Identifier: 156976344

GI number: 156976344

Start: 354830

End: 356299

Strand: Reverse

Name: 156976344

Synonym: VIBHAR_05117

Alternate gene names: NA

Gene position: 356299-354830 (Counterclockwise)

Preceding gene: 156976345

Following gene: 156976343

Centisome position: 16.17

GC content: 47.07

Gene sequence:

>1470_bases
GTGTCTAACGGCGAACTGCCAAGGGACGCAGATGGGTTACAACTCAACTTTTGTAAAACATTGGCGTGTGACAACTTTGG
ATTGAGTGATGCGAAGCGGTACGTTTTGCAGCATGCTAACCCTAAACGTCCGGCGATGGTATGCCGTGAATGTGGAGCTT
TCCCCCCCTTACTTAATAACCGCGATGTAGTGAACGAACTTCATCGTCTGCGTCACGTTCATAGTGACGGGTTACCTGCT
TGTCGTAATGATGATTGCGACAACTTCGGACTTTCTGTCCACACGCACAAACACCTCTATCACGCTTTCGGTTACAGTGG
CGATCGCCAACGTTACCGCTGTAAAGTGTGTCAAAGTACCTTTGTCGATAAATGGTCTGGTGCCAACAAAAAGCTTCAAT
TCCAAGAGAATTTGATGGGCTTATTGTTTACTGGTTATTCCGTTCGAGAAATCTGCCGTAAACTCAGCATCAACCCAAAA
ACCTTTTACGACCATGTTGACCATATTGCTAGCCGTTGCCGCCGTAAATTGGCGACGATAGATGCTCGTTGGGTTAACCA
TGCAAAGCATTATGAACTGGCATCAAACTACGTCGCCCTGCAACCAAACAGCAACAATGGCGTGTATTGGATTGCTTCGG
GTGAAGCGCATTCAGGCTACATTCTGTGTCAGCATGTGAACTACTCTTCTGATGATGAGCCAATCGCTGCTATGGATCAC
AACCCATACGATGAGGTGTCTCGTTTCGTTTCGCAAGAATACACTGCAGAAGCAAGCGAACCGCCACCAACGCCATCTAA
GAAGCTACGTGAACGCATCGATCAGAAGTACCAAACTATCTTGGCCCGTTGCAACGTAGAAGACCCATTGGGGAACCTTT
CTGTCTTCCACTACCCATCAAAAGGCGCATTGATTCGTCCGCCTTACACCTCTTATGCACACTACCTCCATGTGTTGGAT
ATGTGTTGCCCTGAAAAGCGTGTTTCTATCTACATGCCTCAAGATCCCCTGCTCCGCTCTGCGGCGTTGAGCGTTTGTTT
ATCTCGCATTAAAGAGAAAAGCGTCGATCTGATGTATGTCGAAGAAGACGCGATTTGGGACATGAACGCGCCATTTGGTA
AAGTGGATATTGCCTACATGAGTTGGTGGCGTGACCGTTGGGCGATCTCCAGCCAATACGAGTGCAACAAGGGTATCTGT
TATTTAGCTGGCGACAGAAATGAGCCGGAATCGTGGTTCAATGTGGCCACAACTCGCCATATCCAATTCTATCAAAATCG
TTTTCAACTGCTGTTTGAAAGCTTTATCAACGAGCCACGTCGCAAATTGCGTCCTGCAGGCATATTGCCTCTTTTAGATA
TATTCAGAGCTTGGCATAATTTGTGCTATCAGGATAAGCAAGGACTTACTGCTGCTCAAAGGCTCAAAGTCACCGACGCA
CCACTCACGATCAAACAATTGTTATCATGA

Upstream 100 bases:

>100_bases
AAGTTGCACTAGAAACAGCAATCAACATCTAAGAAATTTCTAAGTAGTAAATTGCAGCCGGAGCCTGACCGGCTGCACGA
ATTATCCCGAGGGGGCGATT

Downstream 100 bases:

>100_bases
TTATTTAACAGTTTACTCATTTAGAAGTGGTAAATAAGCGCGGAGCGCGGTATACATTACGGAATCCGATACCTTATTGG
TGTGGCTGTTTTCTACACCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 489; Mature: 488

Protein sequence:

>489_residues
MSNGELPRDADGLQLNFCKTLACDNFGLSDAKRYVLQHANPKRPAMVCRECGAFPPLLNNRDVVNELHRLRHVHSDGLPA
CRNDDCDNFGLSVHTHKHLYHAFGYSGDRQRYRCKVCQSTFVDKWSGANKKLQFQENLMGLLFTGYSVREICRKLSINPK
TFYDHVDHIASRCRRKLATIDARWVNHAKHYELASNYVALQPNSNNGVYWIASGEAHSGYILCQHVNYSSDDEPIAAMDH
NPYDEVSRFVSQEYTAEASEPPPTPSKKLRERIDQKYQTILARCNVEDPLGNLSVFHYPSKGALIRPPYTSYAHYLHVLD
MCCPEKRVSIYMPQDPLLRSAALSVCLSRIKEKSVDLMYVEEDAIWDMNAPFGKVDIAYMSWWRDRWAISSQYECNKGIC
YLAGDRNEPESWFNVATTRHIQFYQNRFQLLFESFINEPRRKLRPAGILPLLDIFRAWHNLCYQDKQGLTAAQRLKVTDA
PLTIKQLLS

Sequences:

>Translated_489_residues
MSNGELPRDADGLQLNFCKTLACDNFGLSDAKRYVLQHANPKRPAMVCRECGAFPPLLNNRDVVNELHRLRHVHSDGLPA
CRNDDCDNFGLSVHTHKHLYHAFGYSGDRQRYRCKVCQSTFVDKWSGANKKLQFQENLMGLLFTGYSVREICRKLSINPK
TFYDHVDHIASRCRRKLATIDARWVNHAKHYELASNYVALQPNSNNGVYWIASGEAHSGYILCQHVNYSSDDEPIAAMDH
NPYDEVSRFVSQEYTAEASEPPPTPSKKLRERIDQKYQTILARCNVEDPLGNLSVFHYPSKGALIRPPYTSYAHYLHVLD
MCCPEKRVSIYMPQDPLLRSAALSVCLSRIKEKSVDLMYVEEDAIWDMNAPFGKVDIAYMSWWRDRWAISSQYECNKGIC
YLAGDRNEPESWFNVATTRHIQFYQNRFQLLFESFINEPRRKLRPAGILPLLDIFRAWHNLCYQDKQGLTAAQRLKVTDA
PLTIKQLLS
>Mature_488_residues
SNGELPRDADGLQLNFCKTLACDNFGLSDAKRYVLQHANPKRPAMVCRECGAFPPLLNNRDVVNELHRLRHVHSDGLPAC
RNDDCDNFGLSVHTHKHLYHAFGYSGDRQRYRCKVCQSTFVDKWSGANKKLQFQENLMGLLFTGYSVREICRKLSINPKT
FYDHVDHIASRCRRKLATIDARWVNHAKHYELASNYVALQPNSNNGVYWIASGEAHSGYILCQHVNYSSDDEPIAAMDHN
PYDEVSRFVSQEYTAEASEPPPTPSKKLRERIDQKYQTILARCNVEDPLGNLSVFHYPSKGALIRPPYTSYAHYLHVLDM
CCPEKRVSIYMPQDPLLRSAALSVCLSRIKEKSVDLMYVEEDAIWDMNAPFGKVDIAYMSWWRDRWAISSQYECNKGICY
LAGDRNEPESWFNVATTRHIQFYQNRFQLLFESFINEPRRKLRPAGILPLLDIFRAWHNLCYQDKQGLTAAQRLKVTDAP
LTIKQLLS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 56369; Mature: 56237

Theoretical pI: Translated: 8.18; Mature: 8.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.7 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
3.7 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNGELPRDADGLQLNFCKTLACDNFGLSDAKRYVLQHANPKRPAMVCRECGAFPPLLNN
CCCCCCCCCCCCCEEEHHHHHHCCCCCHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCC
RDVVNELHRLRHVHSDGLPACRNDDCDNFGLSVHTHKHLYHAFGYSGDRQRYRCKVCQST
HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEHHHHHHHHHCCCCCCHHHHHHHHHHH
FVDKWSGANKKLQFQENLMGLLFTGYSVREICRKLSINPKTFYDHVDHIASRCRRKLATI
HHHHHCCCCCCEEHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
DARWVNHAKHYELASNYVALQPNSNNGVYWIASGEAHSGYILCQHVNYSSDDEPIAAMDH
HHHHHHHHHHHHHHCCEEEEEECCCCCEEEEECCCCCCCEEEEEECCCCCCCCCEEECCC
NPYDEVSRFVSQEYTAEASEPPPTPSKKLRERIDQKYQTILARCNVEDPLGNLSVFHYPS
CCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECC
KGALIRPPYTSYAHYLHVLDMCCPEKRVSIYMPQDPLLRSAALSVCLSRIKEKSVDLMYV
CCCEECCCHHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHHHHHCCCCEEEE
EEDAIWDMNAPFGKVDIAYMSWWRDRWAISSQYECNKGICYLAGDRNEPESWFNVATTRH
ECCCEECCCCCCCCEEHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHH
IQFYQNRFQLLFESFINEPRRKLRPAGILPLLDIFRAWHNLCYQDKQGLTAAQRLKVTDA
HHHHHHHHHHHHHHHHHCHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHEECCCC
PLTIKQLLS
CCHHHHHCC
>Mature Secondary Structure 
SNGELPRDADGLQLNFCKTLACDNFGLSDAKRYVLQHANPKRPAMVCRECGAFPPLLNN
CCCCCCCCCCCCEEEHHHHHHCCCCCHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCC
RDVVNELHRLRHVHSDGLPACRNDDCDNFGLSVHTHKHLYHAFGYSGDRQRYRCKVCQST
HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEHHHHHHHHHCCCCCCHHHHHHHHHHH
FVDKWSGANKKLQFQENLMGLLFTGYSVREICRKLSINPKTFYDHVDHIASRCRRKLATI
HHHHHCCCCCCEEHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
DARWVNHAKHYELASNYVALQPNSNNGVYWIASGEAHSGYILCQHVNYSSDDEPIAAMDH
HHHHHHHHHHHHHHCCEEEEEECCCCCEEEEECCCCCCCEEEEEECCCCCCCCCEEECCC
NPYDEVSRFVSQEYTAEASEPPPTPSKKLRERIDQKYQTILARCNVEDPLGNLSVFHYPS
CCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECC
KGALIRPPYTSYAHYLHVLDMCCPEKRVSIYMPQDPLLRSAALSVCLSRIKEKSVDLMYV
CCCEECCCHHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHHHHHCCCCEEEE
EEDAIWDMNAPFGKVDIAYMSWWRDRWAISSQYECNKGICYLAGDRNEPESWFNVATTRH
ECCCEECCCCCCCCEEHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHH
IQFYQNRFQLLFESFINEPRRKLRPAGILPLLDIFRAWHNLCYQDKQGLTAAQRLKVTDA
HHHHHHHHHHHHHHHHHCHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHEECCCC
PLTIKQLLS
CCHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA