| Definition | Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequence. |
|---|---|
| Accession | NC_009784 |
| Length | 2,204,018 |
Click here to switch to the map view.
The map label for this gene is 156976253
Identifier: 156976253
GI number: 156976253
Start: 275167
End: 276948
Strand: Reverse
Name: 156976253
Synonym: VIBHAR_05025
Alternate gene names: NA
Gene position: 276948-275167 (Counterclockwise)
Preceding gene: 156976280
Following gene: 156976252
Centisome position: 12.57
GC content: 48.09
Gene sequence:
>1782_bases ATGGCATATACTCCTGAAACACGACATGCAGCCAGAGCCCTGTATTTAAAGGCTTGGACACCCAAAGAAATCGCTTCCGA GTTAGGTTTGAACAGCACACGAATTATTTATCACTGGGCTGACAAACACGGATGGCGTGACATGCTGCGCGAACAAACGA TTGATGAGTCGATCGCGCGCAGAATTGAAACCCTGCTTGAGTTGGAAAATCCCACCAAAGGCCAACTCGATATGCTTGAT AGACTCATCAAGCACCATGTACAGCTAAAAAAATTTCACGCTCAAGCCCAATCTACCCAAGAGAAAAAAGCTCAAACAGA AAAGGAAGCAGCGACTAACACTCATCGAAATAACTCGCGTTCCAAAAAGTCTGACGACAAGGCAAACAAGAAAAAAAGTA AAAAGAAGAACCACATTGATGAGCTGACCAAAGAAAACTTTGCAACCTGGCATGAATCACTCTTTGAATATCAGCACACG ATGCGTAACAACCTGCATCAGCGTACACGTAACATTCTGAAATCACGTCAGATTGGCGCGACCTACTATTTCAGTGGTGA GGCGCTAGAGGACGCGATTTTGACGGGTGACAACCAGATATTTTTGTCAGCGTCTCGCGCCCAGGCAGAAGTATTTAGAA GTTACATCATTGCGATTGCTCAAGCGTTCTTAGGCATCGAATTGACCGGCAACCCGATCATTCTCTCTAATGGCGCAGAG CTGCGCTTTCTTTCGACCAACTCTAAAACCGCGCAAAGTTATCATGGCCACGTTTATGTGGATGAGTACTTTTGGATCCC TAAATTCGATGAGCTCAACAAACTCGCGTCCGCCATGGCGACCCACAAGAACTGGCGAAAAACCTACTTCTCCACCCCCT CGGCTAAAACGCACCAGGCTTATACCTTTTGGACAGGTGACCAATGGCGCCAAGGTCGAGATACCCGCGCCAATATTGAA TTTCCGACTTTTGACGACTATCGAGACGGTGGACGCCTCTGCCCTGACAAGCAGTGGCGTTACGTAGTTACAATTGAGGA TGCCGCAGCAGGAGGCTGTGAGCTTTTTGATATTGATGAGCTGCGCGACGAATACAGCAAAGACGATTTCGATAATCTGT TTATGTGTATCTTCGTCGATGGCGCCAGCTCCGTCTTTAAGTTCTCAGCGCTTGAAAAAGCCATGGTGGATATTAGCCGG TGGCAAGACTTCAAGCCCAATGACAACGATCCCTTCGACCGGCGTGAAGTTTGGTTAGGTTACGACCCAAGCCGAACCCG AGACAACGCCTGTTTAGTTGTAGTGGCCCCGCCTATTGTCGCCATTGAAAAGTTCCGAGTCCTGGAAAAGCACTATTGGC GCGGGTTGAACTTTCAGTACCAGGCTCAGCAAGTCTCAAAAGTGTTTGAGCGTTACAACGTGAGCTATTTGGGCATCGAT ACCACAGGTATTGGCGCGGGTGTGTATGACTTACTCAGCAAAAAGCACCCGCGAGAAACCGTGGCCATTCAATACAGCAA CGAGAGTAAAAACCGATTGGTGATGAAGATGATTGATGTAGTCGAAGCCAATCGCATTCAATTTGATGCTGAACACAAAG ACATTGCCATGGCCTTCATGGCCATTAAGCGGGCGACCACCAACAGCGGTAACAGCATGACCTTCAAAGCTGAGCGCAGC GAGTTAACCGGACACGCCGACGCATTCTGGGCGATTTCTCATGCCTGCATTAACGAGCCGCTCGATCACTCAGAAAAACG CAAATCAACTTGGCAGATGTAA
Upstream 100 bases:
>100_bases CAGCCACTTCAATTCCGACCAATTCGGATATGAGCACTATCCGAAATTATCCGAACTTTGCTATGCAATTTAGTGAGTTA ACTGGGCTTATTATTGGCTC
Downstream 100 bases:
>100_bases CTCTATGACTGAACAGAAAACAGAAACAATCACAAATGACGAAAGCTTGATGTTTAGCTTTGGTGAGCCTGAGATCATGA ATCGTGATTTTACCAACTAC
Product: hypothetical protein
Products: NA
Alternate protein names: Phage Terminase ATPase Subunit; Terminase; Phage-Related Terminase ATPase Subunit; Bacteriophage Terminase; Orf16-Like Phage Protein; Phage Terminase ATPase Subunit P; Mu-Like Prophage FluMu Protein Gp; Prophage; ATPase Subunit Of Terminase; Phage Gene; Terminase Subunit; Phage P2 Terminase ATPase Subunit GpP-Like Protein; Bacteriophage Terminase Large Subunit; Prophage Large Terminase Protein; Fels-2 Prophage Protein; Phage Terminase Subunit GpP; Terminase Large Subunit; DNA-Dependent ATPase Terminase Subunit; Terminase ATPase Subunit Bacteriophage Origin; Terminase Related Protein; Bacteriophage P2 GPP Capsid Protein; Phage Terminase Subunit; Phage-Related Terminase
Number of amino acids: Translated: 593; Mature: 592
Protein sequence:
>593_residues MAYTPETRHAARALYLKAWTPKEIASELGLNSTRIIYHWADKHGWRDMLREQTIDESIARRIETLLELENPTKGQLDMLD RLIKHHVQLKKFHAQAQSTQEKKAQTEKEAATNTHRNNSRSKKSDDKANKKKSKKKNHIDELTKENFATWHESLFEYQHT MRNNLHQRTRNILKSRQIGATYYFSGEALEDAILTGDNQIFLSASRAQAEVFRSYIIAIAQAFLGIELTGNPIILSNGAE LRFLSTNSKTAQSYHGHVYVDEYFWIPKFDELNKLASAMATHKNWRKTYFSTPSAKTHQAYTFWTGDQWRQGRDTRANIE FPTFDDYRDGGRLCPDKQWRYVVTIEDAAAGGCELFDIDELRDEYSKDDFDNLFMCIFVDGASSVFKFSALEKAMVDISR WQDFKPNDNDPFDRREVWLGYDPSRTRDNACLVVVAPPIVAIEKFRVLEKHYWRGLNFQYQAQQVSKVFERYNVSYLGID TTGIGAGVYDLLSKKHPRETVAIQYSNESKNRLVMKMIDVVEANRIQFDAEHKDIAMAFMAIKRATTNSGNSMTFKAERS ELTGHADAFWAISHACINEPLDHSEKRKSTWQM
Sequences:
>Translated_593_residues MAYTPETRHAARALYLKAWTPKEIASELGLNSTRIIYHWADKHGWRDMLREQTIDESIARRIETLLELENPTKGQLDMLD RLIKHHVQLKKFHAQAQSTQEKKAQTEKEAATNTHRNNSRSKKSDDKANKKKSKKKNHIDELTKENFATWHESLFEYQHT MRNNLHQRTRNILKSRQIGATYYFSGEALEDAILTGDNQIFLSASRAQAEVFRSYIIAIAQAFLGIELTGNPIILSNGAE LRFLSTNSKTAQSYHGHVYVDEYFWIPKFDELNKLASAMATHKNWRKTYFSTPSAKTHQAYTFWTGDQWRQGRDTRANIE FPTFDDYRDGGRLCPDKQWRYVVTIEDAAAGGCELFDIDELRDEYSKDDFDNLFMCIFVDGASSVFKFSALEKAMVDISR WQDFKPNDNDPFDRREVWLGYDPSRTRDNACLVVVAPPIVAIEKFRVLEKHYWRGLNFQYQAQQVSKVFERYNVSYLGID TTGIGAGVYDLLSKKHPRETVAIQYSNESKNRLVMKMIDVVEANRIQFDAEHKDIAMAFMAIKRATTNSGNSMTFKAERS ELTGHADAFWAISHACINEPLDHSEKRKSTWQM >Mature_592_residues AYTPETRHAARALYLKAWTPKEIASELGLNSTRIIYHWADKHGWRDMLREQTIDESIARRIETLLELENPTKGQLDMLDR LIKHHVQLKKFHAQAQSTQEKKAQTEKEAATNTHRNNSRSKKSDDKANKKKSKKKNHIDELTKENFATWHESLFEYQHTM RNNLHQRTRNILKSRQIGATYYFSGEALEDAILTGDNQIFLSASRAQAEVFRSYIIAIAQAFLGIELTGNPIILSNGAEL RFLSTNSKTAQSYHGHVYVDEYFWIPKFDELNKLASAMATHKNWRKTYFSTPSAKTHQAYTFWTGDQWRQGRDTRANIEF PTFDDYRDGGRLCPDKQWRYVVTIEDAAAGGCELFDIDELRDEYSKDDFDNLFMCIFVDGASSVFKFSALEKAMVDISRW QDFKPNDNDPFDRREVWLGYDPSRTRDNACLVVVAPPIVAIEKFRVLEKHYWRGLNFQYQAQQVSKVFERYNVSYLGIDT TGIGAGVYDLLSKKHPRETVAIQYSNESKNRLVMKMIDVVEANRIQFDAEHKDIAMAFMAIKRATTNSGNSMTFKAERSE LTGHADAFWAISHACINEPLDHSEKRKSTWQM
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 68662; Mature: 68531
Theoretical pI: Translated: 8.41; Mature: 8.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAYTPETRHAARALYLKAWTPKEIASELGLNSTRIIYHWADKHGWRDMLREQTIDESIAR CCCCCCHHHHHHEEEEECCCHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHH RIETLLELENPTKGQLDMLDRLIKHHVQLKKFHAQAQSTQEKKAQTEKEAATNTHRNNSR HHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC SKKSDDKANKKKSKKKNHIDELTKENFATWHESLFEYQHTMRNNLHQRTRNILKSRQIGA CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCE TYYFSGEALEDAILTGDNQIFLSASRAQAEVFRSYIIAIAQAFLGIELTGNPIILSNGAE EEEECCCHHHHHHEECCCEEEEECCHHHHHHHHHHHHHHHHHHHCEEECCCEEEEECCCE LRFLSTNSKTAQSYHGHVYVDEYFWIPKFDELNKLASAMATHKNWRKTYFSTPSAKTHQA EEEEECCCCCHHCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCE YTFWTGDQWRQGRDTRANIEFPTFDDYRDGGRLCPDKQWRYVVTIEDAAAGGCELFDIDE EEEECCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCEEEEHHH LRDEYSKDDFDNLFMCIFVDGASSVFKFSALEKAMVDISRWQDFKPNDNDPFDRREVWLG HHHHHCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEC YDPSRTRDNACLVVVAPPIVAIEKFRVLEKHYWRGLNFQYQAQQVSKVFERYNVSYLGID CCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHCCEEEEEE TTGIGAGVYDLLSKKHPRETVAIQYSNESKNRLVMKMIDVVEANRIQFDAEHKDIAMAFM CCCCCHHHHHHHCCCCCCCEEEEEECCCCCHHHHHHHHHHHHCCCEEECCCHHHHHHHHH AIKRATTNSGNSMTFKAERSELTGHADAFWAISHACINEPLDHSEKRKSTWQM HHHHHCCCCCCEEEEEECHHHCCCCCHHHHHHHHHHHCCCCCCCHHHHHHCCC >Mature Secondary Structure AYTPETRHAARALYLKAWTPKEIASELGLNSTRIIYHWADKHGWRDMLREQTIDESIAR CCCCCHHHHHHEEEEECCCHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHH RIETLLELENPTKGQLDMLDRLIKHHVQLKKFHAQAQSTQEKKAQTEKEAATNTHRNNSR HHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC SKKSDDKANKKKSKKKNHIDELTKENFATWHESLFEYQHTMRNNLHQRTRNILKSRQIGA CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCE TYYFSGEALEDAILTGDNQIFLSASRAQAEVFRSYIIAIAQAFLGIELTGNPIILSNGAE EEEECCCHHHHHHEECCCEEEEECCHHHHHHHHHHHHHHHHHHHCEEECCCEEEEECCCE LRFLSTNSKTAQSYHGHVYVDEYFWIPKFDELNKLASAMATHKNWRKTYFSTPSAKTHQA EEEEECCCCCHHCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCE YTFWTGDQWRQGRDTRANIEFPTFDDYRDGGRLCPDKQWRYVVTIEDAAAGGCELFDIDE EEEECCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCEEEEHHH LRDEYSKDDFDNLFMCIFVDGASSVFKFSALEKAMVDISRWQDFKPNDNDPFDRREVWLG HHHHHCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEC YDPSRTRDNACLVVVAPPIVAIEKFRVLEKHYWRGLNFQYQAQQVSKVFERYNVSYLGID CCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHCCEEEEEE TTGIGAGVYDLLSKKHPRETVAIQYSNESKNRLVMKMIDVVEANRIQFDAEHKDIAMAFM CCCCCHHHHHHHCCCCCCCEEEEEECCCCCHHHHHHHHHHHHCCCEEECCCHHHHHHHHH AIKRATTNSGNSMTFKAERSELTGHADAFWAISHACINEPLDHSEKRKSTWQM HHHHHCCCCCCEEEEEECHHHCCCCCHHHHHHHHHHHCCCCCCCHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA