Definition Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequence.
Accession NC_009784
Length 2,204,018

Click here to switch to the map view.

The map label for this gene is 156976250

Identifier: 156976250

GI number: 156976250

Start: 272930

End: 273277

Strand: Reverse

Name: 156976250

Synonym: VIBHAR_05022

Alternate gene names: NA

Gene position: 273277-272930 (Counterclockwise)

Preceding gene: 156976251

Following gene: 156976248

Centisome position: 12.4

GC content: 36.21

Gene sequence:

>348_bases
ATGAAATTTTTATCAATAGTCACCACTTCTATAATTTTATTATCTCCATTTTCTGCCAGTGCATATGACGCAAACGAACA
ATTTCAGGACTGTGTGAAAAATGTTACAGAGTCATATCATGATGATTTGGCTAAGGAGTGTGCAACTTATCCATATTGTC
GCGGTGAGAAAAAGCGCGATGAATTTAATTTGTTCAGCGTAGTGACTGCTGATGGTGCATTCGATAAAATACAACTAAGC
TACGATGCTTCAACGATAATTATTTGGGCTAATGACGTCGGCCTTAACGAATCAAATACTGATGTAATATTACGTGGTTC
TGTTGATAAGTGCGGTATTACTTTCTAA

Upstream 100 bases:

>100_bases
TGTTGCTATGATGTTAGTTTCGAGCTGTATTGCACCAGCAAGAAATTAATCTATTCATACTTGAATTTTTATCTATAATT
TTTATTTAAAGGAAAAAACC

Downstream 100 bases:

>100_bases
TTGCCACACAAAAAGAGCAATACTCTGTAAAGTTATCCAAGTAATAAAAGAGTGGCTTATATCCACTCTTTTTATTTATT
CGCTAATAATTTTTTTGCTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 115; Mature: 115

Protein sequence:

>115_residues
MKFLSIVTTSIILLSPFSASAYDANEQFQDCVKNVTESYHDDLAKECATYPYCRGEKKRDEFNLFSVVTADGAFDKIQLS
YDASTIIIWANDVGLNESNTDVILRGSVDKCGITF

Sequences:

>Translated_115_residues
MKFLSIVTTSIILLSPFSASAYDANEQFQDCVKNVTESYHDDLAKECATYPYCRGEKKRDEFNLFSVVTADGAFDKIQLS
YDASTIIIWANDVGLNESNTDVILRGSVDKCGITF
>Mature_115_residues
MKFLSIVTTSIILLSPFSASAYDANEQFQDCVKNVTESYHDDLAKECATYPYCRGEKKRDEFNLFSVVTADGAFDKIQLS
YDASTIIIWANDVGLNESNTDVILRGSVDKCGITF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12809; Mature: 12809

Theoretical pI: Translated: 4.26; Mature: 4.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.5 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
3.5 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKFLSIVTTSIILLSPFSASAYDANEQFQDCVKNVTESYHDDLAKECATYPYCRGEKKRD
CCHHHHHHHHHHEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
EFNLFSVVTADGAFDKIQLSYDASTIIIWANDVGLNESNTDVILRGSVDKCGITF
CCEEEEEEECCCCCCEEEEEECCCEEEEEECCCCCCCCCCCEEEECCCCCCCCCC
>Mature Secondary Structure
MKFLSIVTTSIILLSPFSASAYDANEQFQDCVKNVTESYHDDLAKECATYPYCRGEKKRD
CCHHHHHHHHHHEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
EFNLFSVVTADGAFDKIQLSYDASTIIIWANDVGLNESNTDVILRGSVDKCGITF
CCEEEEEEECCCCCCEEEEEECCCEEEEEECCCCCCCCCCCEEEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA