| Definition | Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequence. |
|---|---|
| Accession | NC_009784 |
| Length | 2,204,018 |
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The map label for this gene is 156976236
Identifier: 156976236
GI number: 156976236
Start: 264366
End: 266342
Strand: Reverse
Name: 156976236
Synonym: VIBHAR_05008
Alternate gene names: NA
Gene position: 266342-264366 (Counterclockwise)
Preceding gene: 156976237
Following gene: 156976232
Centisome position: 12.08
GC content: 39.45
Gene sequence:
>1977_bases ATGAAACTTGAACTCAAAAACGTAGTCTCTGTAAGTGTACCGGAGCTGAGTCAACGCAACTTCATGTTACTTGAGTCAAG ACCGCATAGTATTGAAAGAACACGCCAGATAAATGCTGTAATAGGCGCGAACAGCTCAGGGAAAAGCCGTTTTATTCGTA CTATACTTTTAAGTGAAATAAATCATTTCGACTACAATTTGGGATTAATCCAAAGAGCAAGTAAAGAACTTAATAATGCT ATTAATAATTCATCTGAGTTTGTACCGCAGCATTTGATAGATCTATTTAAAAATAATTCACATAGGTTATTTGATTCCAA TTTAAATTTAGAAATTAGCACAGCTATTAGAGATTATTTCAAATCGATTTCAAAAGGAGCTTCTGATTTTGATGTTGATA ATGTAAGAAAAAAAATATTCTCTAAGAACTTAATTGATTTGATGAATGAATATCGATCATCTCTTGATTTCAACATACAA AGCATACGAAAAGAGTACATTCCCATTTTGCGCGGCCTTCGAACTTTAATGCCTGCTAAAGATGTTTACCGCGAACGAAC CGTGAATGACTATTTCAGTGAAAAAAATTCCGGCACAACTCTCAATATTTTTACTGGTCATACTCTGTATGAAGATATGG TGTATTCGTTGCTAGGCACTGAAGAAGAGCAAGAAAGCGTAAAAAAATATCAAGACTACCTTTCAACATACTTCTTCGAG GGGCAACGTGTAAATATCATCCCACGCAAAGACAGAAATGGCAAAAAAGCCTCTGCAGAAAATAACGTCGTCCATATAAA AATCGGTGATGAGCCCCAGCGCCCAATCTATGAACTCGGCGATGGCATTCAAGCGATGGTTACGCTTACTGTGCGTCCGT TCTTGGAAAAGGAGCCGACAATATTCTTCATCGAAGAACCAGAACAGAACCTTCACGCAGGAATGCAACGAGCTCTTATT GAGGCGTTTAGAGCTTGCCCTCAACACATGTTCTTCTTTACCACGCAATCAAACCACTTTGTTGACCTCACCTTAGAATC TGATGACATAAATCTAATCAGCGTGAAAAAAGAAGTCGATTCTGAGGGTAAAGTAAAATCTATCGTTCAAAGCCAAGCAA ACAATAGCGAGATACTCCAAGAACTGGGCGTACTAGCCTCTTCAGTTCTTTTAGCTAATTGTTCTATTTGGGTTGAAGGT GTTACTGATAAACGCTACTTACAAGTATATCTGGAAAAATATCTAGATGAACTCGAAGCATCAAGCAACTCAGACAAGTT GACAGAAGAACAACGAGCAACAGCGAAAAAGCGTGCAGGAAAGCTGCGTACATATAGTGAAAACCTTCACTACGTTTTTG TCGAATACCAAGGGTCTAATATAACTCACTGGGCATTTACAGATGAGGCAGATCCCGAGGAAACATCAAAAACACCCGCA GCAAAACTCAGTAAAGATATCTTACTTCTGGCTGATGCTGATATTGACAGTAAGGGTAGTCGTGTTGAAGATTTACAAAA TGCCCTTGGTGAGCGCTTTGAGATACTCGAATGGAAAGAAATCGAAAACTACATTCCTCAAGACATCATTGTAGAAGCAG CAAAAAAGCACTGGGAAAGCTTCCAGCATACTCAGGGGTCTGACTTTGACATTGAGAGTTTACCTGACAATTATTTTGAG GACTCAGAGATCGGCATCGGTGGCTTACTCGAAAATAGAGTTTCACGCTCTGAAACTTCGACTAAAGCTGAAGCCAGCTA CTTCTTCAGAGATGGTGCACCTACGAAGAAAGTAGGGAAAGAAGTGCAGCACTCACCTAGCTCTGGCAGCACCATAAGAA TCAAAGTACCTTTTTGCGACACAGCCGTGGCGATAATGAAAAGTAAAGACGAGGACAACAAATATAAATGGCAGCTAACC CCAGAGCTCAATAAACTCTGCAACAAGATTTGGTCATTTATCGAACAGTGCAATTAA
Upstream 100 bases:
>100_bases GTAAGAAACTAGCGATTAGCTTCAATGGATCGACATTAACCGTCGAGGAAGATGAAGTGAGAGTTGTAGGGCGCGTCGCG TTGGTTATGGAAAAGAAATA
Downstream 100 bases:
>100_bases ACATTAACCGTCGAGGAAGATGAAGTGAGAGTTGTAGGGCGAGTCGCATTGATCCTGGAGAAGTGCTAGCGGTAGAACTC ATTTTTTGAGCTCACTCGCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 658; Mature: 658
Protein sequence:
>658_residues MKLELKNVVSVSVPELSQRNFMLLESRPHSIERTRQINAVIGANSSGKSRFIRTILLSEINHFDYNLGLIQRASKELNNA INNSSEFVPQHLIDLFKNNSHRLFDSNLNLEISTAIRDYFKSISKGASDFDVDNVRKKIFSKNLIDLMNEYRSSLDFNIQ SIRKEYIPILRGLRTLMPAKDVYRERTVNDYFSEKNSGTTLNIFTGHTLYEDMVYSLLGTEEEQESVKKYQDYLSTYFFE GQRVNIIPRKDRNGKKASAENNVVHIKIGDEPQRPIYELGDGIQAMVTLTVRPFLEKEPTIFFIEEPEQNLHAGMQRALI EAFRACPQHMFFFTTQSNHFVDLTLESDDINLISVKKEVDSEGKVKSIVQSQANNSEILQELGVLASSVLLANCSIWVEG VTDKRYLQVYLEKYLDELEASSNSDKLTEEQRATAKKRAGKLRTYSENLHYVFVEYQGSNITHWAFTDEADPEETSKTPA AKLSKDILLLADADIDSKGSRVEDLQNALGERFEILEWKEIENYIPQDIIVEAAKKHWESFQHTQGSDFDIESLPDNYFE DSEIGIGGLLENRVSRSETSTKAEASYFFRDGAPTKKVGKEVQHSPSSGSTIRIKVPFCDTAVAIMKSKDEDNKYKWQLT PELNKLCNKIWSFIEQCN
Sequences:
>Translated_658_residues MKLELKNVVSVSVPELSQRNFMLLESRPHSIERTRQINAVIGANSSGKSRFIRTILLSEINHFDYNLGLIQRASKELNNA INNSSEFVPQHLIDLFKNNSHRLFDSNLNLEISTAIRDYFKSISKGASDFDVDNVRKKIFSKNLIDLMNEYRSSLDFNIQ SIRKEYIPILRGLRTLMPAKDVYRERTVNDYFSEKNSGTTLNIFTGHTLYEDMVYSLLGTEEEQESVKKYQDYLSTYFFE GQRVNIIPRKDRNGKKASAENNVVHIKIGDEPQRPIYELGDGIQAMVTLTVRPFLEKEPTIFFIEEPEQNLHAGMQRALI EAFRACPQHMFFFTTQSNHFVDLTLESDDINLISVKKEVDSEGKVKSIVQSQANNSEILQELGVLASSVLLANCSIWVEG VTDKRYLQVYLEKYLDELEASSNSDKLTEEQRATAKKRAGKLRTYSENLHYVFVEYQGSNITHWAFTDEADPEETSKTPA AKLSKDILLLADADIDSKGSRVEDLQNALGERFEILEWKEIENYIPQDIIVEAAKKHWESFQHTQGSDFDIESLPDNYFE DSEIGIGGLLENRVSRSETSTKAEASYFFRDGAPTKKVGKEVQHSPSSGSTIRIKVPFCDTAVAIMKSKDEDNKYKWQLT PELNKLCNKIWSFIEQCN >Mature_658_residues MKLELKNVVSVSVPELSQRNFMLLESRPHSIERTRQINAVIGANSSGKSRFIRTILLSEINHFDYNLGLIQRASKELNNA INNSSEFVPQHLIDLFKNNSHRLFDSNLNLEISTAIRDYFKSISKGASDFDVDNVRKKIFSKNLIDLMNEYRSSLDFNIQ SIRKEYIPILRGLRTLMPAKDVYRERTVNDYFSEKNSGTTLNIFTGHTLYEDMVYSLLGTEEEQESVKKYQDYLSTYFFE GQRVNIIPRKDRNGKKASAENNVVHIKIGDEPQRPIYELGDGIQAMVTLTVRPFLEKEPTIFFIEEPEQNLHAGMQRALI EAFRACPQHMFFFTTQSNHFVDLTLESDDINLISVKKEVDSEGKVKSIVQSQANNSEILQELGVLASSVLLANCSIWVEG VTDKRYLQVYLEKYLDELEASSNSDKLTEEQRATAKKRAGKLRTYSENLHYVFVEYQGSNITHWAFTDEADPEETSKTPA AKLSKDILLLADADIDSKGSRVEDLQNALGERFEILEWKEIENYIPQDIIVEAAKKHWESFQHTQGSDFDIESLPDNYFE DSEIGIGGLLENRVSRSETSTKAEASYFFRDGAPTKKVGKEVQHSPSSGSTIRIKVPFCDTAVAIMKSKDEDNKYKWQLT PELNKLCNKIWSFIEQCN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 75340; Mature: 75340
Theoretical pI: Translated: 5.25; Mature: 5.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLELKNVVSVSVPELSQRNFMLLESRPHSIERTRQINAVIGANSSGKSRFIRTILLSEI CCCCCCCHHEECCCCCCCCCEEEEECCCCHHHHHHHHEEEEECCCCCHHHHHHHHHHHHH NHFDYNLGLIQRASKELNNAINNSSEFVPQHLIDLFKNNSHRLFDSNLNLEISTAIRDYF HHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCEEECCCCCEEEHHHHHHHH KSISKGASDFDVDNVRKKIFSKNLIDLMNEYRSSLDFNIQSIRKEYIPILRGLRTLMPAK HHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCHH DVYRERTVNDYFSEKNSGTTLNIFTGHTLYEDMVYSLLGTEEEQESVKKYQDYLSTYFFE HHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCC GQRVNIIPRKDRNGKKASAENNVVHIKIGDEPQRPIYELGDGIQAMVTLTVRPFLEKEPT CCEEEEEECCCCCCCCCCCCCCEEEEEECCCCCCCHHHHCCCCEEEHEEEEHHHHCCCCC IFFIEEPEQNLHAGMQRALIEAFRACPQHMFFFTTQSNHFVDLTLESDDINLISVKKEVD EEEEECCCHHHHHHHHHHHHHHHHHCCHHEEEEEECCCEEEEEEEECCCCEEEEEEHHCC SEGKVKSIVQSQANNSEILQELGVLASSVLLANCSIWVEGVTDKRYLQVYLEKYLDELEA CCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCEEEEECCCCHHHHHHHHHHHHHHHHC SSNSDKLTEEQRATAKKRAGKLRTYSENLHYVFVEYQGSNITHWAFTDEADPEETSKTPA CCCCCHHHHHHHHHHHHHHCCCEEECCCCEEEEEEEECCCEEEEEECCCCCCCCCCCCCH AKLSKDILLLADADIDSKGSRVEDLQNALGERFEILEWKEIENYIPQDIIVEAAKKHWES HHHCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH FQHTQGSDFDIESLPDNYFEDSEIGIGGLLENRVSRSETSTKAEASYFFRDGAPTKKVGK HHCCCCCCCCHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHEEECCCCHHHHHH EVQHSPSSGSTIRIKVPFCDTAVAIMKSKDEDNKYKWQLTPELNKLCNKIWSFIEQCN HHHCCCCCCCEEEEEECCCHHHHHHHHCCCCCCCEEEEECHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MKLELKNVVSVSVPELSQRNFMLLESRPHSIERTRQINAVIGANSSGKSRFIRTILLSEI CCCCCCCHHEECCCCCCCCCEEEEECCCCHHHHHHHHEEEEECCCCCHHHHHHHHHHHHH NHFDYNLGLIQRASKELNNAINNSSEFVPQHLIDLFKNNSHRLFDSNLNLEISTAIRDYF HHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCEEECCCCCEEEHHHHHHHH KSISKGASDFDVDNVRKKIFSKNLIDLMNEYRSSLDFNIQSIRKEYIPILRGLRTLMPAK HHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCHH DVYRERTVNDYFSEKNSGTTLNIFTGHTLYEDMVYSLLGTEEEQESVKKYQDYLSTYFFE HHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCC GQRVNIIPRKDRNGKKASAENNVVHIKIGDEPQRPIYELGDGIQAMVTLTVRPFLEKEPT CCEEEEEECCCCCCCCCCCCCCEEEEEECCCCCCCHHHHCCCCEEEHEEEEHHHHCCCCC IFFIEEPEQNLHAGMQRALIEAFRACPQHMFFFTTQSNHFVDLTLESDDINLISVKKEVD EEEEECCCHHHHHHHHHHHHHHHHHCCHHEEEEEECCCEEEEEEEECCCCEEEEEEHHCC SEGKVKSIVQSQANNSEILQELGVLASSVLLANCSIWVEGVTDKRYLQVYLEKYLDELEA CCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCEEEEECCCCHHHHHHHHHHHHHHHHC SSNSDKLTEEQRATAKKRAGKLRTYSENLHYVFVEYQGSNITHWAFTDEADPEETSKTPA CCCCCHHHHHHHHHHHHHHCCCEEECCCCEEEEEEEECCCEEEEEECCCCCCCCCCCCCH AKLSKDILLLADADIDSKGSRVEDLQNALGERFEILEWKEIENYIPQDIIVEAAKKHWES HHHCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH FQHTQGSDFDIESLPDNYFEDSEIGIGGLLENRVSRSETSTKAEASYFFRDGAPTKKVGK HHCCCCCCCCHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHEEECCCCHHHHHH EVQHSPSSGSTIRIKVPFCDTAVAIMKSKDEDNKYKWQLTPELNKLCNKIWSFIEQCN HHHCCCCCCCEEEEEECCCHHHHHHHHCCCCCCCEEEEECHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA