| Definition | Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequence. |
|---|---|
| Accession | NC_009784 |
| Length | 2,204,018 |
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The map label for this gene is 156976189
Identifier: 156976189
GI number: 156976189
Start: 216839
End: 217042
Strand: Reverse
Name: 156976189
Synonym: VIBHAR_04960
Alternate gene names: NA
Gene position: 217042-216839 (Counterclockwise)
Preceding gene: 156976190
Following gene: 156976187
Centisome position: 9.85
GC content: 43.14
Gene sequence:
>204_bases TTGTCTGCAAAAAAGCGTTTGGAAAAGAGATCTAGCGACGGATATAGATATACCCAAGTGACTTCAAGATGCAGGATTCA GAGCGTTGTCATTGATTCGAGGTCAAGGAAAACGACGCCGCGTAATAGCCTGTCTCTTGATCACAAGTCTAGTGATCAAG AGACATTGCGAGTTCGTAGCCCTCAAGGATGGTTTGTAATTTAA
Upstream 100 bases:
>100_bases TCGCTACTGCGTTAATAGAACCTTTCTATTCGCTAACAACGCGCAAAATTTAGTTCGTCCGAACGCTCAAAGCCTCCCCT TCATCCGGGAGGCTTTTTCT
Downstream 100 bases:
>100_bases ACCATCCTTCCCAAAGCACCTTTATTGAAGCTCTACCCGTCCTTTTGGTATCTTTCCAACCATAGTAGCTTCCAAGCTTT TTGGCCCAATACCTTTTCAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 67; Mature: 66
Protein sequence:
>67_residues MSAKKRLEKRSSDGYRYTQVTSRCRIQSVVIDSRSRKTTPRNSLSLDHKSSDQETLRVRSPQGWFVI
Sequences:
>Translated_67_residues MSAKKRLEKRSSDGYRYTQVTSRCRIQSVVIDSRSRKTTPRNSLSLDHKSSDQETLRVRSPQGWFVI >Mature_66_residues SAKKRLEKRSSDGYRYTQVTSRCRIQSVVIDSRSRKTTPRNSLSLDHKSSDQETLRVRSPQGWFVI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7815; Mature: 7684
Theoretical pI: Translated: 11.50; Mature: 11.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAKKRLEKRSSDGYRYTQVTSRCRIQSVVIDSRSRKTTPRNSLSLDHKSSDQETLRVRS CCHHHHHHHCCCCCEEEEHHHHHHHHHHEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEC PQGWFVI CCCCEEC >Mature Secondary Structure SAKKRLEKRSSDGYRYTQVTSRCRIQSVVIDSRSRKTTPRNSLSLDHKSSDQETLRVRS CHHHHHHHCCCCCEEEEHHHHHHHHHHEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEC PQGWFVI CCCCEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA