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The map label for this gene is fliDL [H]

Identifier: 156976185

GI number: 156976185

Start: 213256

End: 214569

Strand: Reverse

Name: fliDL [H]

Synonym: VIBHAR_04956

Alternate gene names: 156976185

Gene position: 214569-213256 (Counterclockwise)

Preceding gene: 156976187

Following gene: 156976184

Centisome position: 9.74

GC content: 48.63

Gene sequence:

>1314_bases
ATGGCAACCCAGTTCGCCACGTTAGACGTTCAGCCATTTCAGCAACGTTACCAAATGCAGGCCGATCGATACCAAGCGCA
ACTTACCGCTCTAGGCAAAGTGGAAAGTGCATTGCGTGACTTCCGAACTGCGGTTAATGAGATGAACAGCAGCACAAGCA
GTATCATCAAAAATACCGCAACGACCTCTCAAGACGGCTTTTTCACCGCAAGTGCCGATGCCAACGCATTAGTCGGTAAC
TACCAGATTTTCGTTGAGCAAGTCGCCACTTCACATCAGATTTCTACGGGTATGCCTGCAGACTTGGAGGCCACTACCGA
GGTCCCAACTACCGGTACGTTAGAGTTCACCATCAATGGTGAAACCATGACTTTAGATATGTCGACGGTGGATACTGACG
GCGATGGCAAAGCGACCGTGACGGACCTAGTCAGCGCAATCAACAACAACCCTGATAACCCAGGCGTGAATGCCACGCTT
GTGCGTTCAAATGGCCAAACACACTTCATGCTCTCCAGTACCGAGACAGGGGTAGCAAACACCATCAATGTCAGTGCGAC
GGGAACAGGACAAGCTTGGTTTGAAGATGCATTCACCAACACAACAGAAATCAGTAAACCACAAGATGCTGTTATCTGGC
TTGGCGCGGAAGGTACAGGGCTGCAACTGACTAACTCAAGCAATACCTTTGAAGGTGTGATCGATGGTGTCGACATCACG
GTCACCAAAGCGCAAACCTCCGGTGAAGCCCCTATCTCAATGGACGTAGGCGCAGACAGCGAAGGCACTAAAGAACAACT
TGATAAGTTTGTTGAAGCTTACAACGCTCTGGTTTCTACCATCGATGAATACACCCAAATTGGTGGAGAAGATAAATCAC
GTGGCGTACTGGCCAGTGACCCTACCTTGCGCTCTATCGAAAGCCAATTAACCAGCTTAGTGCGCGGCGAGCATGGCGGA
ATGGGTTTGAGCGAAGTCGGCATCACTCTTGATCGCGACGGCAAAATGAAAGTCGACCAAGACAAATTTACAGAAGCACA
AAAGAACAATAGCGCTGCACTCGAATCAATGTTTAACGGCGATGGCGCCCTGCTCGACTCGCTCGATGACATGGCAGAAC
CGTTTTTGAAGTTCTCGTCTGGCACATTCAATTCTCGTAAAGACGCACTACAAGCCAATCTGGACCGAATTGAAGATAAG
CAGACAACCTTAGAACGCAAGTACGAGATGTCTTACAACCGCTATCTAAAACAATTCACTCAAATGAACACCTTAATGAC
GCAAATGAACCAAACCATGTCGATGTTTGGCTAA

Upstream 100 bases:

>100_bases
CAGGCACACATCTTGCGATTGAGTATTTATTACTGGCATAGAAAAGCCAAATACAGATGAGAGAGGGAGCGACCTCATGA
GTTCGTTAGATCCAATTACC

Downstream 100 bases:

>100_bases
CGCTTTTAGGAGAAGTACTTATGCTAATGGATTCCGGCTACGACTCATACCAACAGGTCGATCTGGATGCTCAAGCAGCA
TCCGCCAACCCACACCAACT

Product: flagellar capping protein

Products: NA

Alternate protein names: HAP2; Filament CAP protein [H]

Number of amino acids: Translated: 437; Mature: 436

Protein sequence:

>437_residues
MATQFATLDVQPFQQRYQMQADRYQAQLTALGKVESALRDFRTAVNEMNSSTSSIIKNTATTSQDGFFTASADANALVGN
YQIFVEQVATSHQISTGMPADLEATTEVPTTGTLEFTINGETMTLDMSTVDTDGDGKATVTDLVSAINNNPDNPGVNATL
VRSNGQTHFMLSSTETGVANTINVSATGTGQAWFEDAFTNTTEISKPQDAVIWLGAEGTGLQLTNSSNTFEGVIDGVDIT
VTKAQTSGEAPISMDVGADSEGTKEQLDKFVEAYNALVSTIDEYTQIGGEDKSRGVLASDPTLRSIESQLTSLVRGEHGG
MGLSEVGITLDRDGKMKVDQDKFTEAQKNNSAALESMFNGDGALLDSLDDMAEPFLKFSSGTFNSRKDALQANLDRIEDK
QTTLERKYEMSYNRYLKQFTQMNTLMTQMNQTMSMFG

Sequences:

>Translated_437_residues
MATQFATLDVQPFQQRYQMQADRYQAQLTALGKVESALRDFRTAVNEMNSSTSSIIKNTATTSQDGFFTASADANALVGN
YQIFVEQVATSHQISTGMPADLEATTEVPTTGTLEFTINGETMTLDMSTVDTDGDGKATVTDLVSAINNNPDNPGVNATL
VRSNGQTHFMLSSTETGVANTINVSATGTGQAWFEDAFTNTTEISKPQDAVIWLGAEGTGLQLTNSSNTFEGVIDGVDIT
VTKAQTSGEAPISMDVGADSEGTKEQLDKFVEAYNALVSTIDEYTQIGGEDKSRGVLASDPTLRSIESQLTSLVRGEHGG
MGLSEVGITLDRDGKMKVDQDKFTEAQKNNSAALESMFNGDGALLDSLDDMAEPFLKFSSGTFNSRKDALQANLDRIEDK
QTTLERKYEMSYNRYLKQFTQMNTLMTQMNQTMSMFG
>Mature_436_residues
ATQFATLDVQPFQQRYQMQADRYQAQLTALGKVESALRDFRTAVNEMNSSTSSIIKNTATTSQDGFFTASADANALVGNY
QIFVEQVATSHQISTGMPADLEATTEVPTTGTLEFTINGETMTLDMSTVDTDGDGKATVTDLVSAINNNPDNPGVNATLV
RSNGQTHFMLSSTETGVANTINVSATGTGQAWFEDAFTNTTEISKPQDAVIWLGAEGTGLQLTNSSNTFEGVIDGVDITV
TKAQTSGEAPISMDVGADSEGTKEQLDKFVEAYNALVSTIDEYTQIGGEDKSRGVLASDPTLRSIESQLTSLVRGEHGGM
GLSEVGITLDRDGKMKVDQDKFTEAQKNNSAALESMFNGDGALLDSLDDMAEPFLKFSSGTFNSRKDALQANLDRIEDKQ
TTLERKYEMSYNRYLKQFTQMNTLMTQMNQTMSMFG

Specific function: Required for the morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the

COG id: COG1345

COG function: function code N; Flagellar capping protein

Gene ontology:

Cell location: Secreted. Bacterial flagellum [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fliD family [H]

Homologues:

Organism=Escherichia coli, GI1788233, Length=440, Percent_Identity=26.3636363636364, Blast_Score=103, Evalue=3e-23,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010810
- InterPro:   IPR010809
- InterPro:   IPR003481 [H]

Pfam domain/function: PF07196 Flagellin_IN; PF07195 FliD_C; PF02465 FliD_N [H]

EC number: NA

Molecular weight: Translated: 47274; Mature: 47142

Theoretical pI: Translated: 4.09; Mature: 4.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATQFATLDVQPFQQRYQMQADRYQAQLTALGKVESALRDFRTAVNEMNSSTSSIIKNTA
CCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCC
TTSQDGFFTASADANALVGNYQIFVEQVATSHQISTGMPADLEATTEVPTTGTLEFTING
CCCCCCCEEECCCCCEEHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEECC
ETMTLDMSTVDTDGDGKATVTDLVSAINNNPDNPGVNATLVRSNGQTHFMLSSTETGVAN
CEEEEEEEECCCCCCCCHHHHHHHHHHCCCCCCCCCCEEEEECCCCEEEEEECCCCCCCE
TINVSATGTGQAWFEDAFTNTTEISKPQDAVIWLGAEGTGLQLTNSSNTFEGVIDGVDIT
EEEEEECCCCCHHHHHHCCCCCCCCCCCCEEEEEECCCCCEEEECCCCCHHHEECCCEEE
VTKAQTSGEAPISMDVGADSEGTKEQLDKFVEAYNALVSTIDEYTQIGGEDKSRGVLASD
EEECCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECC
PTLRSIESQLTSLVRGEHGGMGLSEVGITLDRDGKMKVDQDKFTEAQKNNSAALESMFNG
CHHHHHHHHHHHHHCCCCCCCCHHHHCEEECCCCCEEECHHHHHHHHCCCHHHHHHHHCC
DGALLDSLDDMAEPFLKFSSGTFNSRKDALQANLDRIEDKQTTLERKYEMSYNRYLKQFT
CCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QMNTLMTQMNQTMSMFG
HHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
ATQFATLDVQPFQQRYQMQADRYQAQLTALGKVESALRDFRTAVNEMNSSTSSIIKNTA
CCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCC
TTSQDGFFTASADANALVGNYQIFVEQVATSHQISTGMPADLEATTEVPTTGTLEFTING
CCCCCCCEEECCCCCEEHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEECC
ETMTLDMSTVDTDGDGKATVTDLVSAINNNPDNPGVNATLVRSNGQTHFMLSSTETGVAN
CEEEEEEEECCCCCCCCHHHHHHHHHHCCCCCCCCCCEEEEECCCCEEEEEECCCCCCCE
TINVSATGTGQAWFEDAFTNTTEISKPQDAVIWLGAEGTGLQLTNSSNTFEGVIDGVDIT
EEEEEECCCCCHHHHHHCCCCCCCCCCCCEEEEEECCCCCEEEECCCCCHHHEECCCEEE
VTKAQTSGEAPISMDVGADSEGTKEQLDKFVEAYNALVSTIDEYTQIGGEDKSRGVLASD
EEECCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECC
PTLRSIESQLTSLVRGEHGGMGLSEVGITLDRDGKMKVDQDKFTEAQKNNSAALESMFNG
CHHHHHHHHHHHHHCCCCCCCCHHHHCEEECCCCCEEECHHHHHHHHCCCHHHHHHHHCC
DGALLDSLDDMAEPFLKFSSGTFNSRKDALQANLDRIEDKQTTLERKYEMSYNRYLKQFT
CCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QMNTLMTQMNQTMSMFG
HHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8501040; 12620739 [H]