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The map label for this gene is fliS [H]

Identifier: 156976184

GI number: 156976184

Start: 212849

End: 213235

Strand: Reverse

Name: fliS [H]

Synonym: VIBHAR_04955

Alternate gene names: 156976184

Gene position: 213235-212849 (Counterclockwise)

Preceding gene: 156976185

Following gene: 156976183

Centisome position: 9.67

GC content: 48.58

Gene sequence:

>387_bases
ATGCTAATGGATTCCGGCTACGACTCATACCAACAGGTCGATCTGGATGCTCAAGCAGCATCCGCCAACCCACACCAACT
CGTTGTCATGCTGATCGACGGGTTGCTCGATGAAATTGAACGTGTCCGCGGCCATTTGGCTGCCAATCGTCTTGCTGAGA
AAGGAATGGGCATTAACAAGTGCATGAACATCCTTATCGGATTAAGCAGCGCATTGGATGAAGAGAATGGCGGTGAGATC
GCTGAGAACTTACGTCAGCTCTACGACTTCTGCCAAGTCGAATTGTATTACACCAGCGTACAGAACGATGCGACACGTTT
AGACAATGTAGAGCGCGTAATGGGTAACATTCGAGAAGGATGGATGAACTTTGGACAGCAAGCATAA

Upstream 100 bases:

>100_bases
ACAACCGCTATCTAAAACAATTCACTCAAATGAACACCTTAATGACGCAAATGAACCAAACCATGTCGATGTTTGGCTAA
CGCTTTTAGGAGAAGTACTT

Downstream 100 bases:

>100_bases
CGTGTCGCCGGAGCGATTTCGCCACTTATCAAAACTGATCCAAATCGCCACTAAAACGGCCGATTGGCAAGCACTCAAAC
GCTACGACTTACAATTGCGA

Product: flagellin-specific chaperone FliS

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 128; Mature: 128

Protein sequence:

>128_residues
MLMDSGYDSYQQVDLDAQAASANPHQLVVMLIDGLLDEIERVRGHLAANRLAEKGMGINKCMNILIGLSSALDEENGGEI
AENLRQLYDFCQVELYYTSVQNDATRLDNVERVMGNIREGWMNFGQQA

Sequences:

>Translated_128_residues
MLMDSGYDSYQQVDLDAQAASANPHQLVVMLIDGLLDEIERVRGHLAANRLAEKGMGINKCMNILIGLSSALDEENGGEI
AENLRQLYDFCQVELYYTSVQNDATRLDNVERVMGNIREGWMNFGQQA
>Mature_128_residues
MLMDSGYDSYQQVDLDAQAASANPHQLVVMLIDGLLDEIERVRGHLAANRLAEKGMGINKCMNILIGLSSALDEENGGEI
AENLRQLYDFCQVELYYTSVQNDATRLDNVERVMGNIREGWMNFGQQA

Specific function: Not Known. [C]

COG id: COG1516

COG function: function code NUO; Flagellin-specific chaperone FliS

Gene ontology:

Cell location: Cytoplasm, cytosol (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fliS family [H]

Homologues:

Organism=Escherichia coli, GI1788234, Length=122, Percent_Identity=33.6065573770492, Blast_Score=72, Evalue=1e-14,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003713 [H]

Pfam domain/function: PF02561 FliS [H]

EC number: NA

Molecular weight: Translated: 14313; Mature: 14313

Theoretical pI: Translated: 4.11; Mature: 4.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
5.5 %Met     (Translated Protein)
7.0 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
5.5 %Met     (Mature Protein)
7.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLMDSGYDSYQQVDLDAQAASANPHQLVVMLIDGLLDEIERVRGHLAANRLAEKGMGINK
CCCCCCCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH
CMNILIGLSSALDEENGGEIAENLRQLYDFCQVELYYTSVQNDATRLDNVERVMGNIREG
HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
WMNFGQQA
HHHCCCCC
>Mature Secondary Structure
MLMDSGYDSYQQVDLDAQAASANPHQLVVMLIDGLLDEIERVRGHLAANRLAEKGMGINK
CCCCCCCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH
CMNILIGLSSALDEENGGEIAENLRQLYDFCQVELYYTSVQNDATRLDNVERVMGNIREG
HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
WMNFGQQA
HHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1527488; 11677609 [H]