| Definition | Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequence. |
|---|---|
| Accession | NC_009784 |
| Length | 2,204,018 |
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The map label for this gene is 156976183
Identifier: 156976183
GI number: 156976183
Start: 212545
End: 212847
Strand: Reverse
Name: 156976183
Synonym: VIBHAR_04954
Alternate gene names: NA
Gene position: 212847-212545 (Counterclockwise)
Preceding gene: 156976184
Following gene: 156976182
Centisome position: 9.66
GC content: 49.83
Gene sequence:
>303_bases GTGTCGCCGGAGCGATTTCGCCACTTATCAAAACTGATCCAAATCGCCACTAAAACGGCCGATTGGCAAGCACTCAAACG CTACGACTTACAATTGCGAGAACTGCTTATCAGCCATAAGCCTTTCTTGAAAGATCCGAAACTCGCACCGGAAATCCAGC GAGCAAAAGCGGTGCATGCTACTGCGTTTGCTGCGCTTGAGAAAGCCACCAGCGAACTACAGCAGGAGATGAACATGGTG AACGACCAACAAGAACGAGCCATGGCATATCAACTTGCGATGACGATGGAGCTAACGCAATGA
Upstream 100 bases:
>100_bases TACACCAGCGTACAGAACGATGCGACACGTTTAGACAATGTAGAGCGCGTAATGGGTAACATTCGAGAAGGATGGATGAA CTTTGGACAGCAAGCATAAC
Downstream 100 bases:
>100_bases TGGTTACCAACTCAATACCTGCGAGTTCACCTTCTCAATCGACAGCCGCTGGGAAGATCTCTCACGCTCGTTCAGAGCAA GGCGTTTCACCAGCAAATTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 100; Mature: 99
Protein sequence:
>100_residues MSPERFRHLSKLIQIATKTADWQALKRYDLQLRELLISHKPFLKDPKLAPEIQRAKAVHATAFAALEKATSELQQEMNMV NDQQERAMAYQLAMTMELTQ
Sequences:
>Translated_100_residues MSPERFRHLSKLIQIATKTADWQALKRYDLQLRELLISHKPFLKDPKLAPEIQRAKAVHATAFAALEKATSELQQEMNMV NDQQERAMAYQLAMTMELTQ >Mature_99_residues SPERFRHLSKLIQIATKTADWQALKRYDLQLRELLISHKPFLKDPKLAPEIQRAKAVHATAFAALEKATSELQQEMNMVN DQQERAMAYQLAMTMELTQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11597; Mature: 11465
Theoretical pI: Translated: 9.66; Mature: 9.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 6.0 %Met (Translated Protein) 6.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 5.1 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSPERFRHLSKLIQIATKTADWQALKRYDLQLRELLISHKPFLKDPKLAPEIQRAKAVHA CCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHH TAFAALEKATSELQQEMNMVNDQQERAMAYQLAMTMELTQ HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCC >Mature Secondary Structure SPERFRHLSKLIQIATKTADWQALKRYDLQLRELLISHKPFLKDPKLAPEIQRAKAVHA CHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHH TAFAALEKATSELQQEMNMVNDQQERAMAYQLAMTMELTQ HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA