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The map label for this gene is lafT [H]

Identifier: 156976179

GI number: 156976179

Start: 209352

End: 210209

Strand: Reverse

Name: lafT [H]

Synonym: VIBHAR_04950

Alternate gene names: 156976179

Gene position: 210209-209352 (Counterclockwise)

Preceding gene: 156976180

Following gene: 156976178

Centisome position: 9.54

GC content: 48.14

Gene sequence:

>858_bases
ATGCAAAAGTTTTTTGGAGCCATTACCGTACTGATGTGTGTCTTCGGCGGATACATGTGGGCAGGCGGTAAACTCGGCGC
TATCTGGCAGCCAGCCGAGTTCTTGATCATCATCGGTGCGGCAGCAGGTTCACTGATCATTGGCAACCCGCCACAAGTGT
TAAAAGAAATGCGTCAGCAAGTACGTGCGACCATCTCTGGCCCACGTCAAGAGTATGAGTACTACATGGAGCTGATGGCG
CTGCTTAATAACCTACTCGAAACCGCACGCAGCCGCGGTTTTAAGTTTCTCGATTCGCACATTGAATCACCAGAGCAGAG
CTCTATTTTCCTCGCTTATCCAAAAGTCAGTAACGATCATCGTCTAATTTCTTTCATTACCGACAATTTACGTTTAATGG
CAATGGGACAAATGTCGCCTCATGAATTAGAGGGACTGTTAGAACAAGAAATCGAAGCGATTCAAACCGAGATGCTTTTG
CCTTCACGCTCCATGCAGCGCACAGCAGAGGCTCTTCCTGGGTTCGGTATTCTTGCGGCAGTCGGTGGCATCATCATCAC
CATGCAAGCCATTGACGGCTCAATTGCATTGATTGGTTATCACGTTGCCGCCGCCCTCGTTGGTACATTCATTGGTATTT
TTGGTTGTTACTGTTGTTTAGATCCACTCAGTAACGCCATGGCTCAACGAGTTAGACGAAACATGACGGCTTTCGAATGT
GTACGCGCCACTCTGGTTGCTTACGTTACGAAGAAGCCTACCTTGCTCGCTATCGACGCTGGCCGTAAACACATTCAGTT
AGACATCAAACCAACTTTCAACCAAATGGAGAAGTGGCTAGCTGAACAGGAGGGATAA

Upstream 100 bases:

>100_bases
ATCGCGCTCGTGCTCGATCTGACACCACCTCGCATCTGTCAGTTGCACAAACAAGCGCTTAAACAACTCAACCAATTAAT
GTCCTCTTAGGAGTCACAAG

Downstream 100 bases:

>100_bases
TGCAAAAACAAGAGCATGTGGTGTTCAAACGCGCGAAAGCACATAACCATGACGAGTTTCATGGTGGCGCGTGGAAGGTC
GCGTTTGCCGACTTCATGAT

Product: flagellar motor protein MotA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 285; Mature: 285

Protein sequence:

>285_residues
MQKFFGAITVLMCVFGGYMWAGGKLGAIWQPAEFLIIIGAAAGSLIIGNPPQVLKEMRQQVRATISGPRQEYEYYMELMA
LLNNLLETARSRGFKFLDSHIESPEQSSIFLAYPKVSNDHRLISFITDNLRLMAMGQMSPHELEGLLEQEIEAIQTEMLL
PSRSMQRTAEALPGFGILAAVGGIIITMQAIDGSIALIGYHVAAALVGTFIGIFGCYCCLDPLSNAMAQRVRRNMTAFEC
VRATLVAYVTKKPTLLAIDAGRKHIQLDIKPTFNQMEKWLAEQEG

Sequences:

>Translated_285_residues
MQKFFGAITVLMCVFGGYMWAGGKLGAIWQPAEFLIIIGAAAGSLIIGNPPQVLKEMRQQVRATISGPRQEYEYYMELMA
LLNNLLETARSRGFKFLDSHIESPEQSSIFLAYPKVSNDHRLISFITDNLRLMAMGQMSPHELEGLLEQEIEAIQTEMLL
PSRSMQRTAEALPGFGILAAVGGIIITMQAIDGSIALIGYHVAAALVGTFIGIFGCYCCLDPLSNAMAQRVRRNMTAFEC
VRATLVAYVTKKPTLLAIDAGRKHIQLDIKPTFNQMEKWLAEQEG
>Mature_285_residues
MQKFFGAITVLMCVFGGYMWAGGKLGAIWQPAEFLIIIGAAAGSLIIGNPPQVLKEMRQQVRATISGPRQEYEYYMELMA
LLNNLLETARSRGFKFLDSHIESPEQSSIFLAYPKVSNDHRLISFITDNLRLMAMGQMSPHELEGLLEQEIEAIQTEMLL
PSRSMQRTAEALPGFGILAAVGGIIITMQAIDGSIALIGYHVAAALVGTFIGIFGCYCCLDPLSNAMAQRVRRNMTAFEC
VRATLVAYVTKKPTLLAIDAGRKHIQLDIKPTFNQMEKWLAEQEG

Specific function: Required for rotation of the flagellar motor. Probable transmembrane proton channel [H]

COG id: COG1291

COG function: function code N; Flagellar motor component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the MotA family [H]

Homologues:

Organism=Escherichia coli, GI1788199, Length=280, Percent_Identity=35.3571428571429, Blast_Score=191, Evalue=5e-50,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000540
- InterPro:   IPR022522
- InterPro:   IPR002898 [H]

Pfam domain/function: PF01618 MotA_ExbB [H]

EC number: NA

Molecular weight: Translated: 31495; Mature: 31495

Theoretical pI: Translated: 6.67; Mature: 6.67

Prosite motif: PS01307 MOTA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
5.3 %Met     (Translated Protein)
7.0 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
5.3 %Met     (Mature Protein)
7.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQKFFGAITVLMCVFGGYMWAGGKLGAIWQPAEFLIIIGAAAGSLIIGNPPQVLKEMRQQ
CHHHHHHHHHHHHHHCCCEECCCCCCCCCCCCEEEEEEECCCCCEEECCCHHHHHHHHHH
VRATISGPRQEYEYYMELMALLNNLLETARSRGFKFLDSHIESPEQSSIFLAYPKVSNDH
HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCEEEEECCCCCCC
RLISFITDNLRLMAMGQMSPHELEGLLEQEIEAIQTEMLLPSRSMQRTAEALPGFGILAA
HHHEEHHCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHH
VGGIIITMQAIDGSIALIGYHVAAALVGTFIGIFGCYCCLDPLSNAMAQRVRRNMTAFEC
HHHHHEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH
VRATLVAYVTKKPTLLAIDAGRKHIQLDIKPTFNQMEKWLAEQEG
HHHHHHHHHCCCCEEEEEECCCEEEEEEECCCHHHHHHHHHHCCC
>Mature Secondary Structure
MQKFFGAITVLMCVFGGYMWAGGKLGAIWQPAEFLIIIGAAAGSLIIGNPPQVLKEMRQQ
CHHHHHHHHHHHHHHCCCEECCCCCCCCCCCCEEEEEEECCCCCEEECCCHHHHHHHHHH
VRATISGPRQEYEYYMELMALLNNLLETARSRGFKFLDSHIESPEQSSIFLAYPKVSNDH
HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCEEEEECCCCCCC
RLISFITDNLRLMAMGQMSPHELEGLLEQEIEAIQTEMLLPSRSMQRTAEALPGFGILAA
HHHEEHHCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHH
VGGIIITMQAIDGSIALIGYHVAAALVGTFIGIFGCYCCLDPLSNAMAQRVRRNMTAFEC
HHHHHEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH
VRATLVAYVTKKPTLLAIDAGRKHIQLDIKPTFNQMEKWLAEQEG
HHHHHHHHHCCCCEEEEEECCCEEEEEEECCCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8501040; 12620739 [H]