Definition Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequence.
Accession NC_009784
Length 2,204,018

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The map label for this gene is 156976177

Identifier: 156976177

GI number: 156976177

Start: 207986

End: 208273

Strand: Reverse

Name: 156976177

Synonym: VIBHAR_04948

Alternate gene names: NA

Gene position: 208273-207986 (Counterclockwise)

Preceding gene: 156976178

Following gene: 156976175

Centisome position: 9.45

GC content: 43.06

Gene sequence:

>288_bases
ATGTCCATACCTGCGCCCAATAAATCAAAAAATGACTCGCTCAAAAAAGCCTTTCTCTGGCTGATCATTTTCGACTACCT
ATTGCTGACATTTTTTCTCACTCAACTATCAAGTCTCAACCTCAACAGCGGCACCATGATCAGTCTGCTGCTCGTGGTTT
ATAATATCTTGCTGGTTTCTTTCTGCTACCAGCGCACCAGCAACGATGATTCTTACATCATCTATCCTGTACTTTCAGCG
ACGCTACTGGCGTTCGTCTGCTTCCTGTATTTTTTCTTTCTGGTGTAA

Upstream 100 bases:

>100_bases
TTCAAGACCTATAACCCCCTAAAAGGTCACCAGTTTCTACCCTCTGCGTGACCTTTTCCCCAACGATAATATTGCTGAAA
TTTGTGTAGTTGAGTTCGAT

Downstream 100 bases:

>100_bases
CTCGTTAGCTTTACTGCTCTCTTAATCGCGCTGATGCAGATATCACTAACGTGTCAGAGCTGAGTTTCGCGACTTGGAAA
AAGCCGCCTTTTGAGGAAAG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 95; Mature: 94

Protein sequence:

>95_residues
MSIPAPNKSKNDSLKKAFLWLIIFDYLLLTFFLTQLSSLNLNSGTMISLLLVVYNILLVSFCYQRTSNDDSYIIYPVLSA
TLLAFVCFLYFFFLV

Sequences:

>Translated_95_residues
MSIPAPNKSKNDSLKKAFLWLIIFDYLLLTFFLTQLSSLNLNSGTMISLLLVVYNILLVSFCYQRTSNDDSYIIYPVLSA
TLLAFVCFLYFFFLV
>Mature_94_residues
SIPAPNKSKNDSLKKAFLWLIIFDYLLLTFFLTQLSSLNLNSGTMISLLLVVYNILLVSFCYQRTSNDDSYIIYPVLSAT
LLAFVCFLYFFFLV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10940; Mature: 10809

Theoretical pI: Translated: 8.18; Mature: 8.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSIPAPNKSKNDSLKKAFLWLIIFDYLLLTFFLTQLSSLNLNSGTMISLLLVVYNILLVS
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH
FCYQRTSNDDSYIIYPVLSATLLAFVCFLYFFFLV
HHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHHHC
>Mature Secondary Structure 
SIPAPNKSKNDSLKKAFLWLIIFDYLLLTFFLTQLSSLNLNSGTMISLLLVVYNILLVS
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH
FCYQRTSNDDSYIIYPVLSATLLAFVCFLYFFFLV
HHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA