| Definition | Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequence. |
|---|---|
| Accession | NC_009784 |
| Length | 2,204,018 |
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The map label for this gene is 156976150
Identifier: 156976150
GI number: 156976150
Start: 185432
End: 188152
Strand: Reverse
Name: 156976150
Synonym: VIBHAR_04921
Alternate gene names: NA
Gene position: 188152-185432 (Counterclockwise)
Preceding gene: 156976152
Following gene: 156976137
Centisome position: 8.54
GC content: 49.87
Gene sequence:
>2721_bases GTGCAGCAGTTGTTTATCTCATTAGCGGTTATCTTGGCGATTTTCGCCATGCTCATCACGTTGAAAGCTGTCAGTCGAAT ATCGAGGCTAGAGGACGAAGTGTCTCAGCTTCATAAAGAGCTGGCAGAACTTCGTGCGCGTTGGTTTGAGAAAGGCGCAT CGCCGACTTTTAAACCTGAGCAACACGATGCGCCTCAGTCACAGCATGTTCCAACGCCAACTGAAAACGCGACACAACCC AATAAACCAACGCCTGCATCGGAGTCTAAGTCGGAAGTTACGCCTCTAGTAGCGAAACAAACGCCACAGCCAATTCTTGA ACCGAGCCTCCCTTCAGCCGATGAAGTTCATATCGGTGAGCTGGCGCAGAGCAGTGAATCCGTGTTCGAGAAACAAGCCA ATAAACTGCTGACCAACATCCAAGAAAACTGGTTGGTTTGGGTTGGTGCGCTCGCCATGTTGATTGGTGGCGGTTACCTC GTACAAGTGATTGGCAGTCACATTGAGTTCTCTCCAATCATGCGCGTGACCATCGCATTCTCCATCTCTCTTGCTACCGT GATAGCAGGTGAATGGTTCCACCACCGTGAACAAAAATCCCCAGACCGAGCAGAACGAGCAAAAGGCTTTACCTACGTTC CTGCCGCCATTACCGGAACAGGGTTAACTGGCATCTACTGCACGGTGATCTTTGCGTTTGTCTTCTATCAGCTCTTATCA CCAGGTGCATCACTGGTAATTTTAGCGGGCGCGGCATTTTCGAGCTTAGCGCTTTCTCTGCGCCAAGGGCCTTTGATGGC CGTGCTCGGCTTAATCGGTGGCTATTCAGCACCACTTTGGATTGGGGGTGCAGAGCCTAACTATTACTTACTCGCTGGTT ACATCACTGCGATTTCAGTTGCCGCAACGCTACTGATGCAAAAGATCCGACACGCTTGGATTTCACCATCGATTACCGTG CCGCATATTTTGTGGATGCTGTTGCTGATTGAGAGCATGCCAATAGAACAACTTTTCTCATGGCTTGCGATCTTCCTTTC TCTGAGTTTGTACCTGCTGTTTGCGGTGCCAAGAATGGGTTGGATGCTCAAACCGCGTTACCGTCATTGCCAAGGCAAAT GGACACATCCACCGACAGGTATTGCTCTCGCGATTACCTTGTTAGTGCTGTCGGCACTGGCTCGAATGTCTAGCGTTGAT ACCGCTGAGATGATTTACTTCTATGACTTCTTTACTGCAATGATTTGGCTACCAGCCGTTCGCAAAACTTGGTCATTAAG AGTTTATTTACCATCGATGTTGGTGCCTTCTACCGCGGTCATGCTGCTTTCTATTGCGCTTGAATCTATCTATATGGCTG AAAGACAAACGCCAGTACTAGTCGCGATCGGCATTAGTATCCTGTTGATTGCACTGAGAACATTATTCCAGACACTCGCA GGTGACCGATCTCAACTAACGGGTATCCTCTTCCTTGTGCTCGCCCCTGCGATGACCTTGATTACCCTGCTGTACACCTA CGAGTTTATGAGCCGTCATGTTTTAGGTTGGACACTCTTCACCGCTTCAATTGCGGTTTACTACGCCTTACTTGGACACA GGTTCAAAGCGCTGGCGTTGGAGTGCTCAGCCATCATGCATGCCATCATTGCCGGAACGGCTTTCGTTTGGCTGAATGAC ACATGGCTCACGACTGCTATTTCGATTCAAGTGGCGGTTATGGCGTTGCAAACTCAAGCCAATGTTTTCCGCCCAGCGAA GTGGGCAGTGAAAGTTGCAATGGGCATCTTAGTCGTACGTCTTACGCTGTTACCGCTTATTCCAGAGTGGCAACCTGTCA ATGCGGGGCACTGGGCTTGGGTACTGACCAGTTACCTGCCGTCGTTAGCGATTCTTGCTTACGCTCGCACTGTTTTACAT CGCTCAGATACGGAACTCGCCAATTGGTTTGAAGGAGCGCTCTTACACGTCTTCTTGATGGCGGTGTTCACCCAAACCAA CTACTGGCTCACAGGACAATACGGTTATCTGGGCTACATCGATTTCACTTCGGCAATTGTGTTTGCTAACCAAGCATTGG TGATGGGGTTGGTTTATAGCTATCGCAGCCAGTTCGCGCAGCAACTAGAACGCGTTTATCAAGCTTATAGCTATCTACTT TGGGGCGCTTTTGTTGTGCTGATGATGCTGCTCAATAGCCTTGAATCGCCGTTGGTGGTCAATAATGTTTCCGCTGAATC CATGCCTGTGTTCAACATGCTGTCTCTTGGCTGGCTGCTGCCTGCGGTTGTCTTGCTAGTAACCACTTATAAGCGTTGGA ACACATTGCAGATCCCACGTCCTGTTGTTGCCAGCTTTGGTCTTATCTTAGCGGCCGTTTGGCTAGGTATGTCGATTCGC CAGTTCTGGCAACCTATCTCTATGACGCTAGCTCAGCCAACTGGCATGGCAGAGCTGTTTACTTACTCGATTGCTGGTTT GATTGTCGGAGGCTTGCTGACTTGGGTTGGCGCAACACGCAAAGCAATGACGATTCAACGCATTGGCTTAGCCGTACTGG CGTGCGTCGCGCTTAAGGTGTTCTTATGGGATGTTCGCTCATTGGATGGCTTCTGGCGTGCGATCAGCTTCTTGGGTCTA GGCGCATCACTGATTGGATTAGGATGGTTATTCCAAAAACTCCACCGCTCGGTCGCAGAGCCTGTCGAGCACGCGGAATA G
Upstream 100 bases:
>100_bases AAATTATCGGTCTGTGTTGTATATCCCGTTAGCTTGTCACACAGTGAACTAAGCTTAGCTAAGTTGCTCAAAGTTAAGGA TTCTGAAACAAGGACAGGGA
Downstream 100 bases:
>100_bases GGTTTGAGCTTAGAAAGAGATTCCCGACGTCGCTCCTTCGTCGCTCTCGAGAATGACCCAGAAGAGTATTGAGCGGTGGA CGAATTCTAAGGCGGAATGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 906; Mature: 906
Protein sequence:
>906_residues MQQLFISLAVILAIFAMLITLKAVSRISRLEDEVSQLHKELAELRARWFEKGASPTFKPEQHDAPQSQHVPTPTENATQP NKPTPASESKSEVTPLVAKQTPQPILEPSLPSADEVHIGELAQSSESVFEKQANKLLTNIQENWLVWVGALAMLIGGGYL VQVIGSHIEFSPIMRVTIAFSISLATVIAGEWFHHREQKSPDRAERAKGFTYVPAAITGTGLTGIYCTVIFAFVFYQLLS PGASLVILAGAAFSSLALSLRQGPLMAVLGLIGGYSAPLWIGGAEPNYYLLAGYITAISVAATLLMQKIRHAWISPSITV PHILWMLLLIESMPIEQLFSWLAIFLSLSLYLLFAVPRMGWMLKPRYRHCQGKWTHPPTGIALAITLLVLSALARMSSVD TAEMIYFYDFFTAMIWLPAVRKTWSLRVYLPSMLVPSTAVMLLSIALESIYMAERQTPVLVAIGISILLIALRTLFQTLA GDRSQLTGILFLVLAPAMTLITLLYTYEFMSRHVLGWTLFTASIAVYYALLGHRFKALALECSAIMHAIIAGTAFVWLND TWLTTAISIQVAVMALQTQANVFRPAKWAVKVAMGILVVRLTLLPLIPEWQPVNAGHWAWVLTSYLPSLAILAYARTVLH RSDTELANWFEGALLHVFLMAVFTQTNYWLTGQYGYLGYIDFTSAIVFANQALVMGLVYSYRSQFAQQLERVYQAYSYLL WGAFVVLMMLLNSLESPLVVNNVSAESMPVFNMLSLGWLLPAVVLLVTTYKRWNTLQIPRPVVASFGLILAAVWLGMSIR QFWQPISMTLAQPTGMAELFTYSIAGLIVGGLLTWVGATRKAMTIQRIGLAVLACVALKVFLWDVRSLDGFWRAISFLGL GASLIGLGWLFQKLHRSVAEPVEHAE
Sequences:
>Translated_906_residues MQQLFISLAVILAIFAMLITLKAVSRISRLEDEVSQLHKELAELRARWFEKGASPTFKPEQHDAPQSQHVPTPTENATQP NKPTPASESKSEVTPLVAKQTPQPILEPSLPSADEVHIGELAQSSESVFEKQANKLLTNIQENWLVWVGALAMLIGGGYL VQVIGSHIEFSPIMRVTIAFSISLATVIAGEWFHHREQKSPDRAERAKGFTYVPAAITGTGLTGIYCTVIFAFVFYQLLS PGASLVILAGAAFSSLALSLRQGPLMAVLGLIGGYSAPLWIGGAEPNYYLLAGYITAISVAATLLMQKIRHAWISPSITV PHILWMLLLIESMPIEQLFSWLAIFLSLSLYLLFAVPRMGWMLKPRYRHCQGKWTHPPTGIALAITLLVLSALARMSSVD TAEMIYFYDFFTAMIWLPAVRKTWSLRVYLPSMLVPSTAVMLLSIALESIYMAERQTPVLVAIGISILLIALRTLFQTLA GDRSQLTGILFLVLAPAMTLITLLYTYEFMSRHVLGWTLFTASIAVYYALLGHRFKALALECSAIMHAIIAGTAFVWLND TWLTTAISIQVAVMALQTQANVFRPAKWAVKVAMGILVVRLTLLPLIPEWQPVNAGHWAWVLTSYLPSLAILAYARTVLH RSDTELANWFEGALLHVFLMAVFTQTNYWLTGQYGYLGYIDFTSAIVFANQALVMGLVYSYRSQFAQQLERVYQAYSYLL WGAFVVLMMLLNSLESPLVVNNVSAESMPVFNMLSLGWLLPAVVLLVTTYKRWNTLQIPRPVVASFGLILAAVWLGMSIR QFWQPISMTLAQPTGMAELFTYSIAGLIVGGLLTWVGATRKAMTIQRIGLAVLACVALKVFLWDVRSLDGFWRAISFLGL GASLIGLGWLFQKLHRSVAEPVEHAE >Mature_906_residues MQQLFISLAVILAIFAMLITLKAVSRISRLEDEVSQLHKELAELRARWFEKGASPTFKPEQHDAPQSQHVPTPTENATQP NKPTPASESKSEVTPLVAKQTPQPILEPSLPSADEVHIGELAQSSESVFEKQANKLLTNIQENWLVWVGALAMLIGGGYL VQVIGSHIEFSPIMRVTIAFSISLATVIAGEWFHHREQKSPDRAERAKGFTYVPAAITGTGLTGIYCTVIFAFVFYQLLS PGASLVILAGAAFSSLALSLRQGPLMAVLGLIGGYSAPLWIGGAEPNYYLLAGYITAISVAATLLMQKIRHAWISPSITV PHILWMLLLIESMPIEQLFSWLAIFLSLSLYLLFAVPRMGWMLKPRYRHCQGKWTHPPTGIALAITLLVLSALARMSSVD TAEMIYFYDFFTAMIWLPAVRKTWSLRVYLPSMLVPSTAVMLLSIALESIYMAERQTPVLVAIGISILLIALRTLFQTLA GDRSQLTGILFLVLAPAMTLITLLYTYEFMSRHVLGWTLFTASIAVYYALLGHRFKALALECSAIMHAIIAGTAFVWLND TWLTTAISIQVAVMALQTQANVFRPAKWAVKVAMGILVVRLTLLPLIPEWQPVNAGHWAWVLTSYLPSLAILAYARTVLH RSDTELANWFEGALLHVFLMAVFTQTNYWLTGQYGYLGYIDFTSAIVFANQALVMGLVYSYRSQFAQQLERVYQAYSYLL WGAFVVLMMLLNSLESPLVVNNVSAESMPVFNMLSLGWLLPAVVLLVTTYKRWNTLQIPRPVVASFGLILAAVWLGMSIR QFWQPISMTLAQPTGMAELFTYSIAGLIVGGLLTWVGATRKAMTIQRIGLAVLACVALKVFLWDVRSLDGFWRAISFLGL GASLIGLGWLFQKLHRSVAEPVEHAE
Specific function: Unknown
COG id: COG5373
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 100423; Mature: 100423
Theoretical pI: Translated: 9.19; Mature: 9.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQQLFISLAVILAIFAMLITLKAVSRISRLEDEVSQLHKELAELRARWFEKGASPTFKPE CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC QHDAPQSQHVPTPTENATQPNKPTPASESKSEVTPLVAKQTPQPILEPSLPSADEVHIGE CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCHHHCCCCCCCCCCCCCCCCCCHHHH LAQSSESVFEKQANKLLTNIQENWLVWVGALAMLIGGGYLVQVIGSHIEFSPIMRVTIAF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCHHHHHHHHHHH SISLATVIAGEWFHHREQKSPDRAERAKGFTYVPAAITGTGLTGIYCTVIFAFVFYQLLS HHHHHHHHHHHHHHHHHCCCCCHHHHCCCCEEECCHHCCCCHHHHHHHHHHHHHHHHHHC PGASLVILAGAAFSSLALSLRQGPLMAVLGLIGGYSAPLWIGGAEPNYYLLAGYITAISV CCCCEEEEEHHHHHHHHHHHHCCHHHHHHHHHCCCCCCEEECCCCCCCEEHHHHHHHHHH AATLLMQKIRHAWISPSITVPHILWMLLLIESMPIEQLFSWLAIFLSLSLYLLFAVPRMG HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCC WMLKPRYRHCQGKWTHPPTGIALAITLLVLSALARMSSVDTAEMIYFYDFFTAMIWLPAV CEECCHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH RKTWSLRVYLPSMLVPSTAVMLLSIALESIYMAERQTPVLVAIGISILLIALRTLFQTLA HHHHEEEEEECHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHC GDRSQLTGILFLVLAPAMTLITLLYTYEFMSRHVLGWTLFTASIAVYYALLGHRFKALAL CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ECSAIMHAIIAGTAFVWLNDTWLTTAISIQVAVMALQTQANVFRPAKWAVKVAMGILVVR HHHHHHHHHHHHHHEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH LTLLPLIPEWQPVNAGHWAWVLTSYLPSLAILAYARTVLHRSDTELANWFEGALLHVFLM HHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH AVFTQTNYWLTGQYGYLGYIDFTSAIVFANQALVMGLVYSYRSQFAQQLERVYQAYSYLL HHHHCCCCEEEECCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH WGAFVVLMMLLNSLESPLVVNNVSAESMPVFNMLSLGWLLPAVVLLVTTYKRWNTLQIPR HHHHHHHHHHHHCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCH PVVASFGLILAAVWLGMSIRQFWQPISMTLAQPTGMAELFTYSIAGLIVGGLLTWVGATR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCHH KAMTIQRIGLAVLACVALKVFLWDVRSLDGFWRAISFLGLGASLIGLGWLFQKLHRSVAE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH PVEHAE HHHCCC >Mature Secondary Structure MQQLFISLAVILAIFAMLITLKAVSRISRLEDEVSQLHKELAELRARWFEKGASPTFKPE CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC QHDAPQSQHVPTPTENATQPNKPTPASESKSEVTPLVAKQTPQPILEPSLPSADEVHIGE CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCHHHCCCCCCCCCCCCCCCCCCHHHH LAQSSESVFEKQANKLLTNIQENWLVWVGALAMLIGGGYLVQVIGSHIEFSPIMRVTIAF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCHHHHHHHHHHH SISLATVIAGEWFHHREQKSPDRAERAKGFTYVPAAITGTGLTGIYCTVIFAFVFYQLLS HHHHHHHHHHHHHHHHHCCCCCHHHHCCCCEEECCHHCCCCHHHHHHHHHHHHHHHHHHC PGASLVILAGAAFSSLALSLRQGPLMAVLGLIGGYSAPLWIGGAEPNYYLLAGYITAISV CCCCEEEEEHHHHHHHHHHHHCCHHHHHHHHHCCCCCCEEECCCCCCCEEHHHHHHHHHH AATLLMQKIRHAWISPSITVPHILWMLLLIESMPIEQLFSWLAIFLSLSLYLLFAVPRMG HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCC WMLKPRYRHCQGKWTHPPTGIALAITLLVLSALARMSSVDTAEMIYFYDFFTAMIWLPAV CEECCHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH RKTWSLRVYLPSMLVPSTAVMLLSIALESIYMAERQTPVLVAIGISILLIALRTLFQTLA HHHHEEEEEECHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHC GDRSQLTGILFLVLAPAMTLITLLYTYEFMSRHVLGWTLFTASIAVYYALLGHRFKALAL CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ECSAIMHAIIAGTAFVWLNDTWLTTAISIQVAVMALQTQANVFRPAKWAVKVAMGILVVR HHHHHHHHHHHHHHEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH LTLLPLIPEWQPVNAGHWAWVLTSYLPSLAILAYARTVLHRSDTELANWFEGALLHVFLM HHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH AVFTQTNYWLTGQYGYLGYIDFTSAIVFANQALVMGLVYSYRSQFAQQLERVYQAYSYLL HHHHCCCCEEEECCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH WGAFVVLMMLLNSLESPLVVNNVSAESMPVFNMLSLGWLLPAVVLLVTTYKRWNTLQIPR HHHHHHHHHHHHCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCH PVVASFGLILAAVWLGMSIRQFWQPISMTLAQPTGMAELFTYSIAGLIVGGLLTWVGATR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCHH KAMTIQRIGLAVLACVALKVFLWDVRSLDGFWRAISFLGLGASLIGLGWLFQKLHRSVAE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH PVEHAE HHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA