Definition Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequence.
Accession NC_009784
Length 2,204,018

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The map label for this gene is 156976130

Identifier: 156976130

GI number: 156976130

Start: 170225

End: 170902

Strand: Reverse

Name: 156976130

Synonym: VIBHAR_04901

Alternate gene names: NA

Gene position: 170902-170225 (Counterclockwise)

Preceding gene: 156976131

Following gene: 156976128

Centisome position: 7.75

GC content: 46.31

Gene sequence:

>678_bases
ATGAAAACAGATACTGTCAAACAAGCCGAATCGGCACAATCCAACCTTGTTGCTGAAAACTCAAAAGTGGCTGAAGAGTC
AAAACGCATCATCTACAAATCGATGTTGAGTGCGTTGACCATCGTTGCAATTAGTATTCTAGTGAACTTAAGTATCCGCG
TGGATTACGTTTTGCTAGGCTCAACCTTGGGTGAAACGTCCGTCACTGAAACATTGCAATTGATCATGCTGGCCGTTGCG
TCTTGGTCTTTCTTCCGCGTCTCTAGACAAGAAAGCCATGTATCCCATGCTGCCATTCTGATCTCAGGCTTCTTCGCTGT
ATTGATGATCCGTGAGATGGATTACTGGTTCGACATGATTCACCACGGCTCTTGGGTATTCCCTGCTCTTGCGATAACAG
CGCTGGCTTGTGCGAAAGCTTACCAAGGCGGTAAAGGTACCGTAAATGAAATGGCAATCATCTTACAATCGCCATACATG
AAGCTGCTTATCGGCTCGGTGATCTTATTGTTGGTGTTCTCTCGTCTATACGGAATGGGCAGCTTCTGGCAGCACGTAAT
GGGTGAGCACTACGTACGCGATGTGAAAAACATCTCAGAAGAAGGTATTGAGCTACTTTGTTACAGCTTAATCGCGCTCA
GTGCAGTACGCACACGCCGCGAGCTAAAACGTCAATAA

Upstream 100 bases:

>100_bases
ACGTTCCCCTGACATTACTTTCCAACCGGTCAATAAAATTCCTCGCGCACATCACGAAATTTCACGTTTTTCCACATTTT
TATTGGAGCGGGTGGTCAGG

Downstream 100 bases:

>100_bases
GTTACGCTCGTTGGCCTAGGTATTTGCCTCAGGATCAAGTCGCAGGTTCAGCGACGTAAGAATCGGATGGAATACCGCTA
GCGCTTGCTCTGCGGCACAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 225; Mature: 225

Protein sequence:

>225_residues
MKTDTVKQAESAQSNLVAENSKVAEESKRIIYKSMLSALTIVAISILVNLSIRVDYVLLGSTLGETSVTETLQLIMLAVA
SWSFFRVSRQESHVSHAAILISGFFAVLMIREMDYWFDMIHHGSWVFPALAITALACAKAYQGGKGTVNEMAIILQSPYM
KLLIGSVILLLVFSRLYGMGSFWQHVMGEHYVRDVKNISEEGIELLCYSLIALSAVRTRRELKRQ

Sequences:

>Translated_225_residues
MKTDTVKQAESAQSNLVAENSKVAEESKRIIYKSMLSALTIVAISILVNLSIRVDYVLLGSTLGETSVTETLQLIMLAVA
SWSFFRVSRQESHVSHAAILISGFFAVLMIREMDYWFDMIHHGSWVFPALAITALACAKAYQGGKGTVNEMAIILQSPYM
KLLIGSVILLLVFSRLYGMGSFWQHVMGEHYVRDVKNISEEGIELLCYSLIALSAVRTRRELKRQ
>Mature_225_residues
MKTDTVKQAESAQSNLVAENSKVAEESKRIIYKSMLSALTIVAISILVNLSIRVDYVLLGSTLGETSVTETLQLIMLAVA
SWSFFRVSRQESHVSHAAILISGFFAVLMIREMDYWFDMIHHGSWVFPALAITALACAKAYQGGKGTVNEMAIILQSPYM
KLLIGSVILLLVFSRLYGMGSFWQHVMGEHYVRDVKNISEEGIELLCYSLIALSAVRTRRELKRQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25155; Mature: 25155

Theoretical pI: Translated: 8.65; Mature: 8.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTDTVKQAESAQSNLVAENSKVAEESKRIIYKSMLSALTIVAISILVNLSIRVDYVLLG
CCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEHEEEC
STLGETSVTETLQLIMLAVASWSFFRVSRQESHVSHAAILISGFFAVLMIREMDYWFDMI
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HHGSWVFPALAITALACAKAYQGGKGTVNEMAIILQSPYMKLLIGSVILLLVFSRLYGMG
HCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCH
SFWQHVMGEHYVRDVKNISEEGIELLCYSLIALSAVRTRRELKRQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKTDTVKQAESAQSNLVAENSKVAEESKRIIYKSMLSALTIVAISILVNLSIRVDYVLLG
CCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEHEEEC
STLGETSVTETLQLIMLAVASWSFFRVSRQESHVSHAAILISGFFAVLMIREMDYWFDMI
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HHGSWVFPALAITALACAKAYQGGKGTVNEMAIILQSPYMKLLIGSVILLLVFSRLYGMG
HCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCH
SFWQHVMGEHYVRDVKNISEEGIELLCYSLIALSAVRTRRELKRQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA