Click here to switch to the map view.

The map label for this gene is 156976090

Identifier: 156976090

GI number: 156976090

Start: 129345

End: 130061

Strand: Reverse

Name: 156976090

Synonym: VIBHAR_04861

Alternate gene names: NA

Gene position: 130061-129345 (Counterclockwise)

Preceding gene: 156976091

Following gene: 156976088

Centisome position: 5.9

GC content: 45.19

Gene sequence:

>717_bases
ATGAAATTCACACGCACACTATTAACTGTGGCTATCGCGCTGGTACCTCTATTTTCACACGCAGCAGAAAAAACGTCAGA
AGAGAAGCTGCAAGAAATTACTCAACTGCTGAAAGAAAACCCGCAGATCCTCGATTCACTGCATCAAAACCTACAAGACT
ACGTCGCTTACCAAAAGACGTTTAACGCGACTTTGGATGAAGCGCGCGCCTATCTTAACGATGGCAAGCACTCTTACTTC
GGTGCAGAGAACCCTGAACTGACGATCATCAACGTGACTGATTACAGCTGTCCTTTCTGTAAGCGTCTTGAAGGTGAGCT
AGTGAAGGTAGAGAAAGAATACCCACAGGTGAAAGTGCTGAACATGACGGTATCGTTCAAAGAACAGTATGAAAAGAACG
GTTACAACTCGGCAAGTTACGCATTGAACGTTTGGCAGAACCAACATGACAAGTACAAACAAGTGCACGACTTGTTGGTG
AAGAAGCCGGGTCCACACGATGCAAGTTCACTACAAAAAATCGCTAAGAAGACTGGCACAGAAGCACAGCTTGTTGACGA
CAAAGAGACCAAAGCGCTGTTGGATAAGAACTACGAGTACTTCACTCGCTTAGGTCTACGAGGCACACCAGCGATCATCA
TTAATGACCAAGTCATTCCGGGTTATGTACCTTTCGAGGAGCTTGAGAAAGTCATCGACCAAGAGCTAAAGAAATAA

Upstream 100 bases:

>100_bases
TAGAGAATAAAACCCCATTGCTATTCATCCTCAAATCAATTGTTTTATTTTTAATCACTTCGCGACAAAAACCGCGAAAA
AGAGAGTTTTAGGAAAAATC

Downstream 100 bases:

>100_bases
ATAGCGATTGATACCGATAGCTATTGAAGTAGCTAAGTAAGAACCGAAAATATCAAAGCCCTTCCCTGAGTCGTCAAGGA
AGGGCTTTTCTTTATCAAAA

Product: hypothetical protein

Products: NA

Alternate protein names: Outer Membrane Protein; Dsba Oxidoreductase; Suppressor For Copper-Sensitivity C; Secreted Protein Suppressor For Copper-Sensitivity ScsC; DSBA-Like Thioredoxin Domain-Containing Protein; Secreted Protein Suppressor For Copper-Sensitivity C; 27kDa Outer Membrane Protein; Metal Resistance Protein; DSBA-Like Thioredoxin Domain Protein; ThiolDisulfide Interchange Protein DsbA; DsbA Oxidoreductase; Protein-Disulfide Isomerase; Copper-Sensitivity Suppressor C Protein; Copper Sensitivity Protein ScsC; Secreted Copper-Sensitivity Suppressor C; Lipoprotein

Number of amino acids: Translated: 238; Mature: 238

Protein sequence:

>238_residues
MKFTRTLLTVAIALVPLFSHAAEKTSEEKLQEITQLLKENPQILDSLHQNLQDYVAYQKTFNATLDEARAYLNDGKHSYF
GAENPELTIINVTDYSCPFCKRLEGELVKVEKEYPQVKVLNMTVSFKEQYEKNGYNSASYALNVWQNQHDKYKQVHDLLV
KKPGPHDASSLQKIAKKTGTEAQLVDDKETKALLDKNYEYFTRLGLRGTPAIIINDQVIPGYVPFEELEKVIDQELKK

Sequences:

>Translated_238_residues
MKFTRTLLTVAIALVPLFSHAAEKTSEEKLQEITQLLKENPQILDSLHQNLQDYVAYQKTFNATLDEARAYLNDGKHSYF
GAENPELTIINVTDYSCPFCKRLEGELVKVEKEYPQVKVLNMTVSFKEQYEKNGYNSASYALNVWQNQHDKYKQVHDLLV
KKPGPHDASSLQKIAKKTGTEAQLVDDKETKALLDKNYEYFTRLGLRGTPAIIINDQVIPGYVPFEELEKVIDQELKK
>Mature_238_residues
MKFTRTLLTVAIALVPLFSHAAEKTSEEKLQEITQLLKENPQILDSLHQNLQDYVAYQKTFNATLDEARAYLNDGKHSYF
GAENPELTIINVTDYSCPFCKRLEGELVKVEKEYPQVKVLNMTVSFKEQYEKNGYNSASYALNVWQNQHDKYKQVHDLLV
KKPGPHDASSLQKIAKKTGTEAQLVDDKETKALLDKNYEYFTRLGLRGTPAIIINDQVIPGYVPFEELEKVIDQELKK

Specific function: Unknown

COG id: COG1651

COG function: function code O; Protein-disulfide isomerase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27288; Mature: 27288

Theoretical pI: Translated: 6.26; Mature: 6.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKFTRTLLTVAIALVPLFSHAAEKTSEEKLQEITQLLKENPQILDSLHQNLQDYVAYQKT
CCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
FNATLDEARAYLNDGKHSYFGAENPELTIINVTDYSCPFCKRLEGELVKVEKEYPQVKVL
HHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCHHHHHHCCHHEEEHHCCCCEEEE
NMTVSFKEQYEKNGYNSASYALNVWQNQHDKYKQVHDLLVKKPGPHDASSLQKIAKKTGT
EEEHHHHHHHHHCCCCCHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCC
EAQLVDDKETKALLDKNYEYFTRLGLRGTPAIIINDQVIPGYVPFEELEKVIDQELKK
CCEECCCHHHHHHHHCCHHHHHHCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHCC
>Mature Secondary Structure
MKFTRTLLTVAIALVPLFSHAAEKTSEEKLQEITQLLKENPQILDSLHQNLQDYVAYQKT
CCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
FNATLDEARAYLNDGKHSYFGAENPELTIINVTDYSCPFCKRLEGELVKVEKEYPQVKVL
HHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCHHHHHHCCHHEEEHHCCCCEEEE
NMTVSFKEQYEKNGYNSASYALNVWQNQHDKYKQVHDLLVKKPGPHDASSLQKIAKKTGT
EEEHHHHHHHHHCCCCCHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCC
EAQLVDDKETKALLDKNYEYFTRLGLRGTPAIIINDQVIPGYVPFEELEKVIDQELKK
CCEECCCHHHHHHHHCCHHHHHHCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA