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The map label for this gene is ydhC [C]

Identifier: 156976088

GI number: 156976088

Start: 127050

End: 128354

Strand: Reverse

Name: ydhC [C]

Synonym: VIBHAR_04859

Alternate gene names: 156976088

Gene position: 128354-127050 (Counterclockwise)

Preceding gene: 156976090

Following gene: 156976077

Centisome position: 5.82

GC content: 43.22

Gene sequence:

>1305_bases
ATGGCACAGATATACTTTGCTGCATCACGTAAACCAAGAAACGTGAAACACGTAATCGAATGTCGTTCACTCAACATCAA
ACTAAATGTTCAAACGACGCTCAGCAATAGAGGTATTTTTGAGAACTTAACAATGAATAAATTAATAGAAAAAGTGTCCA
TTCCGTTGGCTGTTGTGCTCTTAATGTTTCCACAGATCATCGAGACAATGTACAGCCCTGCACTGACTTCCGTGAAAAGT
ACGTTTGGCGTCAGTAGCAATGAAGCCGCACAAGCGATGTCCATTTTCTTTGTCGCTTTTGCGTTTGGTGTGGTTTTTTG
GGGAAGAATGTGTGACGTCATAGGTCGAAGAGTATCAACGATACTAGGGCTTATCGTCTTCATTATTGCAGCCATTTTTA
CCATGCTCGCACCAACATTTAATTTGCTGCTAACCGGTTTTGGTTGCTGCGCTTTTGGAGCGGCGGTTGGTTCTGTCTGC
ACGCAAACCATCATTCGTGATGGCTATCATGGTAAAGAGCTCAGCCACGTTTTTTCGATTGTTGGAACATCGATCGGCAT
TAGCCCTGTGATCGGAATGTTGGCTGGCAGTTGGCTAACATCATTCGGCGGATACCAATGGGTTTTCATCGCCATGGTCG
TGTTCATCATTGCACTGTTGGTTTGGTCGTTGTTCAAATTGCCGGAGACAAAGCCAACACACACCAAAAAAGATAGCCTG
TTATCCGTCGGTATAAAGATGCTGACCGATGCGCACATCTGGTACATCACACTCATGGTAGGGTTGTTTAACATTGCGCT
GTTTTCTTATTACAGCATCGCACCATTTATGTTTGAAAAACTGGGCGCAAGCGTTAATTTTTTCGGCAATACAGGGTTCA
TACTCGCACTGGGTTCTGTATTAGGTTCTGTCATCAATATGAAGTTAATACGCATGCATTTAAGTCACGAAAAGATTGTG
ATGTTTGCATCGTGGCTACTTTTGATTGGCGGATTTGGTGTATTCATCATGCAAGAGTCAGTTTGGTTTTTCATTCCTGT
GGTATTGGTTTCCCTATCATTTGGACTGGCGATTCCAAACCTCTTAAGCGGCGCGTTAACTCACTATCGCGATCACTTAG
GGAGTGCAGGAGCACTATTAGGCTTGTTCTATTATCTGGTCATCGGATTTGGCCTTCACAGAGCCGCTGAGTTTGGTGAT
TTGGCGATGACTTTAATCGGCTGTGCTGGCATTGCTTGTGTCATATCCATCATCAAATATCTTGTTGGACTGATTACTTT
CAAAACCTCTGATATTGAGTTTTAA

Upstream 100 bases:

>100_bases
CATCAGCACAAAAATGATCACCTTTCGAAAGTAATGCCATTGAAATCAACCTGTCCTTATTTCGATATTTTATGTTTGAT
TATCATTATAAACCCAAAGC

Downstream 100 bases:

>100_bases
ATACGACTATCTAGGAAGAAAAACCTGTTAGCACTCACGCAGCCCCTTCCCACATTCAAGTGAGAAGGGGCTGATGCCGT
AGTGTCGTTTATTTCTCACG

Product: hypothetical protein

Products: Proton [Cytoplasm]; drug [Periplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 434; Mature: 433

Protein sequence:

>434_residues
MAQIYFAASRKPRNVKHVIECRSLNIKLNVQTTLSNRGIFENLTMNKLIEKVSIPLAVVLLMFPQIIETMYSPALTSVKS
TFGVSSNEAAQAMSIFFVAFAFGVVFWGRMCDVIGRRVSTILGLIVFIIAAIFTMLAPTFNLLLTGFGCCAFGAAVGSVC
TQTIIRDGYHGKELSHVFSIVGTSIGISPVIGMLAGSWLTSFGGYQWVFIAMVVFIIALLVWSLFKLPETKPTHTKKDSL
LSVGIKMLTDAHIWYITLMVGLFNIALFSYYSIAPFMFEKLGASVNFFGNTGFILALGSVLGSVINMKLIRMHLSHEKIV
MFASWLLLIGGFGVFIMQESVWFFIPVVLVSLSFGLAIPNLLSGALTHYRDHLGSAGALLGLFYYLVIGFGLHRAAEFGD
LAMTLIGCAGIACVISIIKYLVGLITFKTSDIEF

Sequences:

>Translated_434_residues
MAQIYFAASRKPRNVKHVIECRSLNIKLNVQTTLSNRGIFENLTMNKLIEKVSIPLAVVLLMFPQIIETMYSPALTSVKS
TFGVSSNEAAQAMSIFFVAFAFGVVFWGRMCDVIGRRVSTILGLIVFIIAAIFTMLAPTFNLLLTGFGCCAFGAAVGSVC
TQTIIRDGYHGKELSHVFSIVGTSIGISPVIGMLAGSWLTSFGGYQWVFIAMVVFIIALLVWSLFKLPETKPTHTKKDSL
LSVGIKMLTDAHIWYITLMVGLFNIALFSYYSIAPFMFEKLGASVNFFGNTGFILALGSVLGSVINMKLIRMHLSHEKIV
MFASWLLLIGGFGVFIMQESVWFFIPVVLVSLSFGLAIPNLLSGALTHYRDHLGSAGALLGLFYYLVIGFGLHRAAEFGD
LAMTLIGCAGIACVISIIKYLVGLITFKTSDIEF
>Mature_433_residues
AQIYFAASRKPRNVKHVIECRSLNIKLNVQTTLSNRGIFENLTMNKLIEKVSIPLAVVLLMFPQIIETMYSPALTSVKST
FGVSSNEAAQAMSIFFVAFAFGVVFWGRMCDVIGRRVSTILGLIVFIIAAIFTMLAPTFNLLLTGFGCCAFGAAVGSVCT
QTIIRDGYHGKELSHVFSIVGTSIGISPVIGMLAGSWLTSFGGYQWVFIAMVVFIIALLVWSLFKLPETKPTHTKKDSLL
SVGIKMLTDAHIWYITLMVGLFNIALFSYYSIAPFMFEKLGASVNFFGNTGFILALGSVLGSVINMKLIRMHLSHEKIVM
FASWLLLIGGFGVFIMQESVWFFIPVVLVSLSFGLAIPNLLSGALTHYRDHLGSAGALLGLFYYLVIGFGLHRAAEFGDL
AMTLIGCAGIACVISIIKYLVGLITFKTSDIEF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily. Bcr/CmlA family [H]

Homologues:

Organism=Escherichia coli, GI48994889, Length=318, Percent_Identity=22.0125786163522, Blast_Score=77, Evalue=2e-15,
Organism=Escherichia coli, GI87082312, Length=330, Percent_Identity=24.8484848484848, Blast_Score=72, Evalue=8e-14,
Organism=Escherichia coli, GI1790146, Length=174, Percent_Identity=31.0344827586207, Blast_Score=72, Evalue=9e-14,
Organism=Escherichia coli, GI1788509, Length=265, Percent_Identity=25.2830188679245, Blast_Score=72, Evalue=1e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004812
- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196
- InterPro:   IPR005829 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 47460; Mature: 47329

Theoretical pI: Translated: 9.32; Mature: 9.32

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHCCCCCCC
>Mature Secondary Structure 
AQIYFAASRKPRNVKHVIECRSLNIKLNVQTTLSNRGIFENLTMNKLIEKVSIPLAVVL
CEEEEECCCCCCCHHHHHHHHHCEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHH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HHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Proton [Periplasm]; drug [Cytoplasm] [C]

Specific reaction: Proton [Periplasm] + drug [Cytoplasm] = Proton [Cytoplasm] + drug [Periplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA