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The map label for this gene is rsgA2 [H]

Identifier: 156976069

GI number: 156976069

Start: 106086

End: 107162

Strand: Reverse

Name: rsgA2 [H]

Synonym: VIBHAR_04839

Alternate gene names: 156976069

Gene position: 107162-106086 (Counterclockwise)

Preceding gene: 156976070

Following gene: 156976068

Centisome position: 4.86

GC content: 47.45

Gene sequence:

>1077_bases
ATGAATAAAACACATTCTTTTTGTGAAACACTACTAACTCAGCCTAACCCATTAAAGCGATTAGGTTGGAAACCATTTTT
TCAACAACAACTGACGTTAGACGATTACGAGAACACGCTTTTCGCGCGAGTGATTGCTCACCATCGTAGTGGTTACGTTG
TGGTTAGCGAGCAAGGCGAAACTCACTTACCTATCCAAACATCACTACCCAGCATGACCGTTGGCGATTGGGCAATATTA
AACCACCAGCAGCAGTTCTCTCGTTTACTCGAGCGTCGCAGCTTATTTAGCCGTAAAGCCGCAGGTAGCAAGGTCGCTGA
GCAGCTTATCGCCGCCAACATAGACACAGTATTTATCGTTTGTTCACTCAACCACGACTTTAACCTGAGCCGCATTGAAC
GTTACTTATCACTCGTTAATGAAGCCGACGTCGAGCCTGTTATTGTGCTAACGAAAGCAGACTTATGCGAGGGTGCTGAC
GAACTCAAGGCTCAAGTACAAAAACTCGATCCGCTGCTTATGGTGGAAAGCGTGAATGGTCTGGACGAATCAAGCGTTGC
TACGTTGATGAGTTGGTGCAGCGAAGGTCAAACCGTCGCGTTCATCGGCTCTTCAGGAGTAGGAAAGTCCACCTTGGTGA
ACACTCTACTTGGCGAGCAAGAACAAGCGACAGGTGGTATTCGTGAAGATGATAGCAAAGGTCGACACACTACGACCTCT
CGTTCAATCCATCTACTGCCCTCTGGTGCAATCCTCATGGATACACCAGGAATGCGTGAGATCCAGTTGGCAGATAGTGA
AACAGGGGTCAGCGAAACCTTTGCTGATATTGAAGCGCTAGCAGAAGACTGCCGATTCAATGATTGCCAACATCAAACCG
AACCTGGATGTGCAGTTCAAGCCGCGATTGAAGGTGGTTCATTGGATTCGCGCCGCTTTACTAACTATCAAAAGTTATTA
CGCGAGCAAGCTCATAATGGTGCAACACTTGCAAAACAGCGAGCGCAGAACAAACAGTTTGGCAAAATGGTACGTAGCGT
GGTCGGCGAAAAGCGCAAACGACAACAAGGTTACTAG

Upstream 100 bases:

>100_bases
TCCCTTCTTTGCCCGGTTTTCACCGGGGTCAGCTCTATGCGAATTAGACCCTAATGCGATTTGTATTAAGGCGCTTTGTT
GCGTCTGGGATAATTCAACA

Downstream 100 bases:

>100_bases
TTTGTTACCAATACGTAATCAATAGAACAAAGGAGGCTAACGCCTCCTTTTTTAATAACTTACTGAAAAATCATCATTCA
TACTTTGCCATACAAAGCAA

Product: ribosome-associated GTPase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 358; Mature: 358

Protein sequence:

>358_residues
MNKTHSFCETLLTQPNPLKRLGWKPFFQQQLTLDDYENTLFARVIAHHRSGYVVVSEQGETHLPIQTSLPSMTVGDWAIL
NHQQQFSRLLERRSLFSRKAAGSKVAEQLIAANIDTVFIVCSLNHDFNLSRIERYLSLVNEADVEPVIVLTKADLCEGAD
ELKAQVQKLDPLLMVESVNGLDESSVATLMSWCSEGQTVAFIGSSGVGKSTLVNTLLGEQEQATGGIREDDSKGRHTTTS
RSIHLLPSGAILMDTPGMREIQLADSETGVSETFADIEALAEDCRFNDCQHQTEPGCAVQAAIEGGSLDSRRFTNYQKLL
REQAHNGATLAKQRAQNKQFGKMVRSVVGEKRKRQQGY

Sequences:

>Translated_358_residues
MNKTHSFCETLLTQPNPLKRLGWKPFFQQQLTLDDYENTLFARVIAHHRSGYVVVSEQGETHLPIQTSLPSMTVGDWAIL
NHQQQFSRLLERRSLFSRKAAGSKVAEQLIAANIDTVFIVCSLNHDFNLSRIERYLSLVNEADVEPVIVLTKADLCEGAD
ELKAQVQKLDPLLMVESVNGLDESSVATLMSWCSEGQTVAFIGSSGVGKSTLVNTLLGEQEQATGGIREDDSKGRHTTTS
RSIHLLPSGAILMDTPGMREIQLADSETGVSETFADIEALAEDCRFNDCQHQTEPGCAVQAAIEGGSLDSRRFTNYQKLL
REQAHNGATLAKQRAQNKQFGKMVRSVVGEKRKRQQGY
>Mature_358_residues
MNKTHSFCETLLTQPNPLKRLGWKPFFQQQLTLDDYENTLFARVIAHHRSGYVVVSEQGETHLPIQTSLPSMTVGDWAIL
NHQQQFSRLLERRSLFSRKAAGSKVAEQLIAANIDTVFIVCSLNHDFNLSRIERYLSLVNEADVEPVIVLTKADLCEGAD
ELKAQVQKLDPLLMVESVNGLDESSVATLMSWCSEGQTVAFIGSSGVGKSTLVNTLLGEQEQATGGIREDDSKGRHTTTS
RSIHLLPSGAILMDTPGMREIQLADSETGVSETFADIEALAEDCRFNDCQHQTEPGCAVQAAIEGGSLDSRRFTNYQKLL
REQAHNGATLAKQRAQNKQFGKMVRSVVGEKRKRQQGY

Specific function: May play a role in 30S ribosomal subunit biogenesis. Unusual circulary permuted GTPase that catalyzes rapid hydrolysis of GTP with a slow catalytic turnover [H]

COG id: COG1162

COG function: function code R; Predicted GTPases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 engC GTPase domain [H]

Homologues:

Organism=Escherichia coli, GI87082381, Length=318, Percent_Identity=32.3899371069182, Blast_Score=135, Evalue=6e-33,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010914
- InterPro:   IPR004881 [H]

Pfam domain/function: PF03193 DUF258 [H]

EC number: NA

Molecular weight: Translated: 39651; Mature: 39651

Theoretical pI: Translated: 6.19; Mature: 6.19

Prosite motif: PS50936 ENGC_GTPASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKTHSFCETLLTQPNPLKRLGWKPFFQQQLTLDDYENTLFARVIAHHRSGYVVVSEQGE
CCCHHHHHHHHHCCCCHHHHCCCCHHHHHHCCHHHHHHHHHHHHHHHCCCCEEEEECCCC
THLPIQTSLPSMTVGDWAILNHQQQFSRLLERRSLFSRKAAGSKVAEQLIAANIDTVFIV
EECCEECCCCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEE
CSLNHDFNLSRIERYLSLVNEADVEPVIVLTKADLCEGADELKAQVQKLDPLLMVESVNG
EECCCCCCHHHHHHHHHHHHHCCCCEEEEEECCHHHCCHHHHHHHHHHCCCEEEECCCCC
LDESSVATLMSWCSEGQTVAFIGSSGVGKSTLVNTLLGEQEQATGGIREDDSKGRHTTTS
CCHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHCCCHHHCCCCCCCCCCCCCCCCC
RSIHLLPSGAILMDTPGMREIQLADSETGVSETFADIEALAEDCRFNDCQHQTEPGCAVQ
CEEEEECCCEEEECCCCCCEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEE
AAIEGGSLDSRRFTNYQKLLREQAHNGATLAKQRAQNKQFGKMVRSVVGEKRKRQQGY
EEECCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MNKTHSFCETLLTQPNPLKRLGWKPFFQQQLTLDDYENTLFARVIAHHRSGYVVVSEQGE
CCCHHHHHHHHHCCCCHHHHCCCCHHHHHHCCHHHHHHHHHHHHHHHCCCCEEEEECCCC
THLPIQTSLPSMTVGDWAILNHQQQFSRLLERRSLFSRKAAGSKVAEQLIAANIDTVFIV
EECCEECCCCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEE
CSLNHDFNLSRIERYLSLVNEADVEPVIVLTKADLCEGADELKAQVQKLDPLLMVESVNG
EECCCCCCHHHHHHHHHHHHHCCCCEEEEEECCHHHCCHHHHHHHHHHCCCEEEECCCCC
LDESSVATLMSWCSEGQTVAFIGSSGVGKSTLVNTLLGEQEQATGGIREDDSKGRHTTTS
CCHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHCCCHHHCCCCCCCCCCCCCCCCC
RSIHLLPSGAILMDTPGMREIQLADSETGVSETFADIEALAEDCRFNDCQHQTEPGCAVQ
CEEEEECCCEEEECCCCCCEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEE
AAIEGGSLDSRRFTNYQKLLREQAHNGATLAKQRAQNKQFGKMVRSVVGEKRKRQQGY
EEECCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: GTP [C]

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12620739 [H]