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The map label for this gene is yjhB [H]

Identifier: 156976045

GI number: 156976045

Start: 77053

End: 78348

Strand: Reverse

Name: yjhB [H]

Synonym: VIBHAR_04815

Alternate gene names: 156976045

Gene position: 78348-77053 (Counterclockwise)

Preceding gene: 156976048

Following gene: 156976044

Centisome position: 3.55

GC content: 47.76

Gene sequence:

>1296_bases
ATGAATGCCAAAAGACACATGAGCGAAGTTCCTATGATTCAAAGGGTAGCTGCCTATCTTGCGATACTGGTTGGTTACTT
TTTCTATTGTTATAACTTTGTAATTATTGACTACGTACGCCCATACATCGTTGAAGCGTATGATAGTATTAGCCTATCAG
ACACTGCCCAGTTCTATACCTGGCAGTCGGTTGGTGCACTCATCGGTGCGTTAAGCTGTGCTTGGTTCGCAACAAAGTTT
GGTAAGAAATCCACTCTTATTACCATCACAGCCCTAAACGGTGGCGCAACGATCATCAATATGATGTTCACCGACTACAC
AACATGGGCAGCAATGCGTTTCATCATTGGTTTGTCACTGGGTGGTTACTTCACCGTAGCAGTGAGCCTGATGATCGGTC
TATTTACGCCAACGGTACGTGGCAAGTTGACGGCGTTCGCGTCTTCTATGTTCTCTGTAGCACTGATGGTCATGGGTGCG
TATGCAGCATTTATTGCAAGCATCGATGCACCATGGGAAAGCCTAATGCTTGTTGGTGGTATCCCACCATTGGCAGCCGC
TGTGGTCATGATCTTTGTACTACCTAGCGACAGCAAAGTGATCGCTTACGGTGAAGAAGAGCAAGCAAAAGCAGAAGAAT
CAAGTGCACCAGCGAAAACAGGCTCTTGGGGCGAAATGCTAAGCAAGCCTTACCGTAAGATCACATTAACGTGTCTATTA
CTGGCTGGCCTTAACTTCTACGGTTTCCAATTCTTTGGTGGCTTCGTAACCACTTACCTACGTGATGTACGTATGTTCGA
CGGTGCAACCATCGGTCTCATCTTCTCTATCTCAGCATTTGGTTCACTGTTTGGTGCGTGGTTCTGGGGTTGGGTAGCTG
ACAAATTCGGTCGTAAGGTGAACGCATTTGGCTTCATCCTAGCGGGCATCATGGTTTCAATCTTCTTTGTTGCACCTGGC
GACATGGTGATTGGCGGTCTAAACGTGCTGGCTCTACTTGGTCTGATTTACAACTTCGGTCTTTCTTCTTCAGCGGTGTG
GGGTGGCTACTTCTCAGAACTGTTCCCAGCACACCTACGTAGCTATGGCGCAGCGCTATTCCACGGCGGTCGTATCCTTG
GTATGTGGGCACCAATGGTACTTATCTTCATCCAAGAGCGTACCGACCTACAAACCGCAATGTGGGGTTCACCAATCGTA
TGGATCCTTGCTGGTCTTCTATGGCTATCGCTGCCAGAGACACTAAAAGGCGGCGTGTTCGATAAGAGCAAAAAAGCTGA
AGCAGCAAAAGCGTAA

Upstream 100 bases:

>100_bases
ATGATTCATCCCGACACGAAAGCGAAGATGATCCAAATAAGATCGTGTTCATTAAGTTTGAATAACAACAAATCCTAAGT
GAAATAGAGGTTTATCGGTC

Downstream 100 bases:

>100_bases
CTGAATTTCAAAAACTCCGGCTGGCTCCCCGGCCGGATGAAAAAACTTAATTTCGAGTCCTGTTCCCAAAGCCGACTCGA
CAGCAAATAAGAGAGTTTAT

Product: permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 431; Mature: 431

Protein sequence:

>431_residues
MNAKRHMSEVPMIQRVAAYLAILVGYFFYCYNFVIIDYVRPYIVEAYDSISLSDTAQFYTWQSVGALIGALSCAWFATKF
GKKSTLITITALNGGATIINMMFTDYTTWAAMRFIIGLSLGGYFTVAVSLMIGLFTPTVRGKLTAFASSMFSVALMVMGA
YAAFIASIDAPWESLMLVGGIPPLAAAVVMIFVLPSDSKVIAYGEEEQAKAEESSAPAKTGSWGEMLSKPYRKITLTCLL
LAGLNFYGFQFFGGFVTTYLRDVRMFDGATIGLIFSISAFGSLFGAWFWGWVADKFGRKVNAFGFILAGIMVSIFFVAPG
DMVIGGLNVLALLGLIYNFGLSSSAVWGGYFSELFPAHLRSYGAALFHGGRILGMWAPMVLIFIQERTDLQTAMWGSPIV
WILAGLLWLSLPETLKGGVFDKSKKAEAAKA

Sequences:

>Translated_431_residues
MNAKRHMSEVPMIQRVAAYLAILVGYFFYCYNFVIIDYVRPYIVEAYDSISLSDTAQFYTWQSVGALIGALSCAWFATKF
GKKSTLITITALNGGATIINMMFTDYTTWAAMRFIIGLSLGGYFTVAVSLMIGLFTPTVRGKLTAFASSMFSVALMVMGA
YAAFIASIDAPWESLMLVGGIPPLAAAVVMIFVLPSDSKVIAYGEEEQAKAEESSAPAKTGSWGEMLSKPYRKITLTCLL
LAGLNFYGFQFFGGFVTTYLRDVRMFDGATIGLIFSISAFGSLFGAWFWGWVADKFGRKVNAFGFILAGIMVSIFFVAPG
DMVIGGLNVLALLGLIYNFGLSSSAVWGGYFSELFPAHLRSYGAALFHGGRILGMWAPMVLIFIQERTDLQTAMWGSPIV
WILAGLLWLSLPETLKGGVFDKSKKAEAAKA
>Mature_431_residues
MNAKRHMSEVPMIQRVAAYLAILVGYFFYCYNFVIIDYVRPYIVEAYDSISLSDTAQFYTWQSVGALIGALSCAWFATKF
GKKSTLITITALNGGATIINMMFTDYTTWAAMRFIIGLSLGGYFTVAVSLMIGLFTPTVRGKLTAFASSMFSVALMVMGA
YAAFIASIDAPWESLMLVGGIPPLAAAVVMIFVLPSDSKVIAYGEEEQAKAEESSAPAKTGSWGEMLSKPYRKITLTCLL
LAGLNFYGFQFFGGFVTTYLRDVRMFDGATIGLIFSISAFGSLFGAWFWGWVADKFGRKVNAFGFILAGIMVSIFFVAPG
DMVIGGLNVLALLGLIYNFGLSSSAVWGGYFSELFPAHLRSYGAALFHGGRILGMWAPMVLIFIQERTDLQTAMWGSPIV
WILAGLLWLSLPETLKGGVFDKSKKAEAAKA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family [H]

Homologues:

Organism=Escherichia coli, GI87082404, Length=400, Percent_Identity=25, Blast_Score=68, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR016196
- InterPro:   IPR005828 [H]

Pfam domain/function: PF00083 Sugar_tr [H]

EC number: NA

Molecular weight: Translated: 46972; Mature: 46972

Theoretical pI: Translated: 8.88; Mature: 8.88

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNAKRHMSEVPMIQRVAAYLAILVGYFFYCYNFVIIDYVRPYIVEAYDSISLSDTAQFYT
CCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHH
WQSVGALIGALSCAWFATKFGKKSTLITITALNGGATIINMMFTDYTTWAAMRFIIGLSL
HHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCC
GGYFTVAVSLMIGLFTPTVRGKLTAFASSMFSVALMVMGAYAAFIASIDAPWESLMLVGG
CHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCC
IPPLAAAVVMIFVLPSDSKVIAYGEEEQAKAEESSAPAKTGSWGEMLSKPYRKITLTCLL
CCHHHHHHHHHHEECCCCEEEEECCHHHHHHHHHCCCCCCCCHHHHHHCHHHHHHHHHHH
LAGLNFYGFQFFGGFVTTYLRDVRMFDGATIGLIFSISAFGSLFGAWFWGWVADKFGRKV
HHCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH
NAFGFILAGIMVSIFFVAPGDMVIGGLNVLALLGLIYNFGLSSSAVWGGYFSELFPAHLR
HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH
SYGAALFHGGRILGMWAPMVLIFIQERTDLQTAMWGSPIVWILAGLLWLSLPETLKGGVF
HHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHCCCCHHHHHHHHHHHCCCHHHCCCCC
DKSKKAEAAKA
CCCCCCCCCCC
>Mature Secondary Structure
MNAKRHMSEVPMIQRVAAYLAILVGYFFYCYNFVIIDYVRPYIVEAYDSISLSDTAQFYT
CCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHH
WQSVGALIGALSCAWFATKFGKKSTLITITALNGGATIINMMFTDYTTWAAMRFIIGLSL
HHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCC
GGYFTVAVSLMIGLFTPTVRGKLTAFASSMFSVALMVMGAYAAFIASIDAPWESLMLVGG
CHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCC
IPPLAAAVVMIFVLPSDSKVIAYGEEEQAKAEESSAPAKTGSWGEMLSKPYRKITLTCLL
CCHHHHHHHHHHEECCCCEEEEECCHHHHHHHHHCCCCCCCCHHHHHHCHHHHHHHHHHH
LAGLNFYGFQFFGGFVTTYLRDVRMFDGATIGLIFSISAFGSLFGAWFWGWVADKFGRKV
HHCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH
NAFGFILAGIMVSIFFVAPGDMVIGGLNVLALLGLIYNFGLSSSAVWGGYFSELFPAHLR
HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH
SYGAALFHGGRILGMWAPMVLIFIQERTDLQTAMWGSPIVWILAGLLWLSLPETLKGGVF
HHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHCCCCHHHHHHHHHHHCCCHHHCCCCC
DKSKKAEAAKA
CCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503 [H]