| Definition | Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequence. |
|---|---|
| Accession | NC_009784 |
| Length | 2,204,018 |
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The map label for this gene is 156976005
Identifier: 156976005
GI number: 156976005
Start: 41250
End: 41585
Strand: Reverse
Name: 156976005
Synonym: VIBHAR_04775
Alternate gene names: NA
Gene position: 41585-41250 (Counterclockwise)
Preceding gene: 156976006
Following gene: 156976004
Centisome position: 1.89
GC content: 44.94
Gene sequence:
>336_bases ATGTCATTAAACGCGATGAGAATCCTTGAACACTCGCCTTGCACTGACTACAATGGCGCACTTTTTCTAATGACTTCAAG GTCACACAAAATGACAGATACAGCTAAACCAGCTCTACCAGATCGCCTAGCGGGTAACCCACGTAGCCCATTCTTCATCA AAGAATGCTTCGAGCACCAAATCGGTATTCGTATCAACGGCCAAGAGCGTACTGACGTAGAAGAATACTGCATCAGCGAA GGTTGGGTAAAAATTGCGTCTCCTAAAGCAAAAGACCGTTTCGGTAACCCAATGCTTATCAAGCTAAAAGGCGAAGTTGA AGCGTACTACGTGTAA
Upstream 100 bases:
>100_bases CATCTGGGTCTATTATTCTTCAATGCAGTACTTACCCAATCGAGTTCGTTTGCTTGTTGACTACTTGATCGAAAACATAC ACCGTGTTGCCTAATGAAGG
Downstream 100 bases:
>100_bases GCCGTCCTCAATTCAAGAAAAAGCCCAACGCTTTAAATGCGTTGGGCTTTTTTGTTCTTTTACTGAGGTGCGTGTTGCGC CCAATGTGAGCCACGACCAT
Product: glutathione peroxidase
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 111; Mature: 110
Protein sequence:
>111_residues MSLNAMRILEHSPCTDYNGALFLMTSRSHKMTDTAKPALPDRLAGNPRSPFFIKECFEHQIGIRINGQERTDVEEYCISE GWVKIASPKAKDRFGNPMLIKLKGEVEAYYV
Sequences:
>Translated_111_residues MSLNAMRILEHSPCTDYNGALFLMTSRSHKMTDTAKPALPDRLAGNPRSPFFIKECFEHQIGIRINGQERTDVEEYCISE GWVKIASPKAKDRFGNPMLIKLKGEVEAYYV >Mature_110_residues SLNAMRILEHSPCTDYNGALFLMTSRSHKMTDTAKPALPDRLAGNPRSPFFIKECFEHQIGIRINGQERTDVEEYCISEG WVKIASPKAKDRFGNPMLIKLKGEVEAYYV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12623; Mature: 12491
Theoretical pI: Translated: 8.06; Mature: 8.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 7.2 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 6.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLNAMRILEHSPCTDYNGALFLMTSRSHKMTDTAKPALPDRLAGNPRSPFFIKECFEHQ CCCCCCEEECCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCHHCCCCCCCHHHHHHHCCC IGIRINGQERTDVEEYCISEGWVKIASPKAKDRFGNPMLIKLKGEVEAYYV CCEEECCCCCCCHHHHHHCCCEEEEECCCCHHHCCCEEEEEEECCEEEEEC >Mature Secondary Structure SLNAMRILEHSPCTDYNGALFLMTSRSHKMTDTAKPALPDRLAGNPRSPFFIKECFEHQ CCCCCEEECCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCHHCCCCCCCHHHHHHHCCC IGIRINGQERTDVEEYCISEGWVKIASPKAKDRFGNPMLIKLKGEVEAYYV CCEEECCCCCCCHHHHHHCCCEEEEECCCCHHHCCCEEEEEEECCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA