| Definition | Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequence. |
|---|---|
| Accession | NC_009784 |
| Length | 2,204,018 |
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The map label for this gene is 156975987
Identifier: 156975987
GI number: 156975987
Start: 25585
End: 25803
Strand: Reverse
Name: 156975987
Synonym: VIBHAR_04757
Alternate gene names: NA
Gene position: 25803-25585 (Counterclockwise)
Preceding gene: 156975988
Following gene: 156975985
Centisome position: 1.17
GC content: 43.38
Gene sequence:
>219_bases ATGATGAGTAAGAACACGAACAAACAAAAGGCGAAAGAAGGTTGCAAGCACATAACCCAACATTCAACCTTAAACCACCA ACCCCACCTAACCTCCCCTTGTATCAAACTCCGAAGCTCTCAAAGCAACGAGCTCAAAGGGGAGGGACTGGTTCTGTATT CGTGGATAGTTCAATTCACAATGCAACATTACAACGCGCTGAAAGTAGATTCTGAATAA
Upstream 100 bases:
>100_bases GGCTCTTTCAGAATGACGGTGTTCGTTTCGCGCCCTCTCCCCGTCATTCCCGCGAACCTAGGTGAGACTGGGAATCTACT CACCACAAACTCGATCGAAA
Downstream 100 bases:
>100_bases TCGCTTAGGCTCCTTCAGAATGACGCTGTTCGTTTAGCTCTCTCTTTCCGTCATTCCCGCGAACCTAGGTGAGACTGGGA ATCTACTCACCACAAACTCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 72; Mature: 72
Protein sequence:
>72_residues MMSKNTNKQKAKEGCKHITQHSTLNHQPHLTSPCIKLRSSQSNELKGEGLVLYSWIVQFTMQHYNALKVDSE
Sequences:
>Translated_72_residues MMSKNTNKQKAKEGCKHITQHSTLNHQPHLTSPCIKLRSSQSNELKGEGLVLYSWIVQFTMQHYNALKVDSE >Mature_72_residues MMSKNTNKQKAKEGCKHITQHSTLNHQPHLTSPCIKLRSSQSNELKGEGLVLYSWIVQFTMQHYNALKVDSE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8255; Mature: 8255
Theoretical pI: Translated: 9.71; Mature: 9.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 6.9 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 6.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMSKNTNKQKAKEGCKHITQHSTLNHQPHLTSPCIKLRSSQSNELKGEGLVLYSWIVQFT CCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCHHHHHHHHHH MQHYNALKVDSE HHHHCCCCCCCC >Mature Secondary Structure MMSKNTNKQKAKEGCKHITQHSTLNHQPHLTSPCIKLRSSQSNELKGEGLVLYSWIVQFT CCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCHHHHHHHHHH MQHYNALKVDSE HHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA