| Definition | Vibrio harveyi ATCC BAA-1116 chromosome I, complete genome. |
|---|---|
| Accession | NC_009783 |
| Length | 3,765,351 |
Click here to switch to the map view.
The map label for this gene is rpsA
Identifier: 156975133
GI number:
Start: 2879605
End: 2881275
Strand: Reverse
Name: rpsA
Synonym: VIBHAR_02860
Alternate gene names: NA
Gene position: NA
Preceding gene: 156975134
Following gene: 156975132
Centisome position: NA
GC content: NA
Gene sequence:
>1671_bases ATGACTGAATCTTTTGCTCAACTCTTTGAAGAGTTTCTAAACGAAACAGAATTCCAACAAGGCAGCATCGTTAAAGGTAC TGTAGTAGCTATCGAGAACGGTTTCGTTCTTGTTGACGCTGGTCTTAAGTCTGAATCTGCTATCCCTGCTGAACAGTTCA AGAACGCTGCTGGCGAACTTGAAGTTGAAGTTGGCGCTGAAGTAGACGTAGCTCTAGACGCTGTTGAAGATGGTTTCGGT GAAACTCAACTTTCTCGTGAGAAAGCTAAGCGTCACGAAGCTTGGATCGTTCTTGAGAAAGCTTACGAAGAAGCTGAAAC TGTTGTTGGTATCATCAACGGTAAAGTTAAAGGCGGTTTCACTGTTGAACTAAACGGTATCCGTGCTTTCCTTCCTGGCT CTCTAGTAGACGTACGTCCAATCCGCGACACTGCTCACCTAGAAAACAAAGAGCTAGAGTTCAAAGTTATCAAACTTGAC CAAAAACGTAACAACGTAGTTGTTTCACGTCGTGCAGTTATCGAATCTGAGAACAGCGTTGAGCGTGACGAGCTTCTAGA AACTCTACAAGAAGGTTCTGAAGTTAAAGGTATCGTTAAGAACCTTACTGACTACGGTGCGTTCGTTGACCTAGGTGGCG TTGACGGTCTTCTACATATCACAGATATGGCTTGGAAGCGCGTTAAGCACCCATCTGAAATCGTTAACGTTGGTGACGAG ATCCAAGTTAAAGTTCTTAAGTTCGACCGTGAGCGTACTCGCGTATCACTAGGTCTTAAGCAACTAGGCGAAGATCCATG GGTAGCAATCGCTAAGCGTTACCCAGAAGGTCACAAACTAACTGGTCGCGTAACTAACCTAACTGACTACGGCTGCTTCG TTGAAATCGAAGAAGGCGTTGAAGGTCTAGTACACGTTTCAGAAATGGATTGGACTAACAAGAACATCCACCCATCTAAA GTTGTTAATGTTGGCGACGAAGTTGAGGTTATGGTTCTTGAGATCGACGAAGAACGTCGTCGTATCTCTCTAGGTCTGAA ACAGTGTAAAGCTAACCCATGGCAGTCATTCGCTGAAGCACAAGCTAAAGGCGACAAAGTTACTGGTAAGATCAAGTCTA TCACTGACTTCGGTATCTTCATCGGTCTAGAAGGCGGCATCGACGGTCTAGTTCACCTATCTGACATTTCTTGGAATGTT GCTGGCGAAGAAGCTGTACGTGAGTACAAGAAAGGCGACGAGATCTCTGCAGTTGTTCTAGCAGTAGACGCTGAGCGTGA GCGCATCTCTCTAGGCGTTAAGCAAATGGAAAACGACCCATTCAATGCTTACGTTGCTGATAACAAGAAAGGTGTTCTAG TTAACGCTACTGTAACTGCTGTTGACGCTAAAGGCGCTACAGTTGAAATCGCAGAAGGCGTTGAAGGCTACATCCGTGCT TCTGAAGTATCTCGCGATCGCGTAGAAGATGCTTCTCTAATCCTAAGCGCTGGTGATGTTGTTGAAGCGAAGTTCACAGG TGTTGACCGTAAGAACCGCGTAATCAACCTATCTATCAAAGCTAAAGATGAAGCTGATGAGCAAGAAGCAATGGCATCTA TCAACAAGCAAGACGAAGCTGCTTTTGGTAATGCAATGGCTGACGCTTTCAAAGCTGCTAAAGGCGAATAA
Upstream 100 bases:
>100_bases CTAGGCTAAGAGCGTTGGTCGCAAGGATGATGACTGGCGAATTTAATAACCCCATGCGGTAGGATACCCGTGGACGTTTA ATTTATTGAAGATTAAATAA
Downstream 100 bases:
>100_bases TTTACTCGCTTAAGCTAAAAAGGAGCCGCAAGGCTCCTTTTTTATGCTTGCTACTTTGTGAGTAGTAATACTAATGTTGA TAAACTATGCTAAAAAAAGA
Product: 30S ribosomal protein S1
Products: NA
Alternate protein names: NA
Number of amino acids: NA
Protein sequence:
>556_residues MTESFAQLFEEFLNETEFQQGSIVKGTVVAIENGFVLVDAGLKSESAIPAEQFKNAAGELEVEVGAEVDVALDAVEDGFG ETQLSREKAKRHEAWIVLEKAYEEAETVVGIINGKVKGGFTVELNGIRAFLPGSLVDVRPIRDTAHLENKELEFKVIKLD QKRNNVVVSRRAVIESENSVERDELLETLQEGSEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDE IQVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGHKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSK VVNVGDEVEVMVLEIDEERRRISLGLKQCKANPWQSFAEAQAKGDKVTGKIKSITDFGIFIGLEGGIDGLVHLSDISWNV AGEEAVREYKKGDEISAVVLAVDAERERISLGVKQMENDPFNAYVADNKKGVLVNATVTAVDAKGATVEIAEGVEGYIRA SEVSRDRVEDASLILSAGDVVEAKFTGVDRKNRVINLSIKAKDEADEQEAMASINKQDEAAFGNAMADAFKAAKGE
Sequences:
NA
Specific function: NA
COG id: COG0539
COG function: function code J; Ribosomal protein S1
Gene ontology:
Cell location: NA
Metaboloic importance: NA
Operon status: NA
Operon components: NA
Similarity: NA
Homologues:
NA
Paralogues:
NA
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: NA
Theoretical pI: NA
Prosite motif: NA
Important sites: NA
Signals:
NA
Transmembrane regions:
NA
Cys/Met content:
NA
Secondary structure: NA
PDB accession: NA
Resolution: NA
Structure class: NA
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: NA
TargetDB status: NA
Availability: NA
References: NA