Definition Vibrio harveyi ATCC BAA-1116 chromosome I, complete genome.
Accession NC_009783
Length 3,765,351

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Identifier: 156972895

GI number:

Start: 554377

End: 557169

Strand: Direct

Name: Not Available

Synonym: VIBHAR_00572

Alternate gene names: NA

Gene position: NA

Preceding gene: 156972894

Following gene: 156972897

Centisome position: NA

GC content: NA

Gene sequence:

>2793_bases
ATGGCAAGTATTCCTGAAAATCCGTTGATTCTGATCGACGGCTCTTCTTATCTATATCGCGCTTTTCACGCTTACCCAGG
CACGATGAGTAACGGTGAAATTCCAACTAACGCAGTTTACGGTGTAGTAAACATGTTACGCAGCATGATGCGTCAGTTTG
CTTCTGATCGTATCGCAGTAGTTTTCGATGCGAAGGGTAAAACCTTCCGTGACGATATGTACCCGGAATACAAAGCGAAT
CGTCCACCAATGCCGGATGATCTTCGTTGCCAGATTGAACCTCTGCATAACGTTATTCGTGCTATGGGCCTGCCATTGAT
CTGTATTCCAGGTGTAGAAGCCGATGACGTGATTGGTACTCTGGCTTATCAAGCATCGCAGCAAGGCATGCCTGTTTTGA
TCAGTACTGGCGATAAAGATATGGCGCAGCTGGTGGATGACAACGTTACCTTGATCAACACCATGACCAACGTCGTGATG
GATCGTGAAGGTGTGGTTGAGAAGTTTGGTATCCCACCAGAATTGATCATCGACTACCTAGCGTTGATGGGCGATAAAGT
CGATAACATTCCTGGTGTTCCGGGCGTGGGTGATAAAACCGCAACTGCTCTGCTACAAGGTATTGGCGGTCTGACAAAGC
TGTATGAAAACCTCGATGATATTGCAGCGCTTGGCTTCCGTGGTTCAAAAACCATGGCGAAGAAGCTAGTCGATAACAAA
GACAACGCAATGCTGTCTTACGAGCTTGCGACCATCAAGCTGGATGTGGAACTGGAAGAGACGCCAGAATCATTGCTAAA
AGCAGAACCAAGCACCGATGAGCTGATCAAACTGTACGGTCAGTTGACGTTCAAGTCTTGGTTGAACGAGCTATTAGAAG
GCGGTACAGGCGTGGTTGAAGCGGATGAATCAACTGGCGCAGCGCGTGGTGGTTCTGCTGCATCTAAAGCTGATATGGAT
ACTTCAGCGGTAAAAATAGACCGTAGCCAATACGAAACCATCCTAGATGAAGCTTCATTCAATGCTTGGTTAGACAAACT
AAAAGCATCGGAGTTATTCGCGTTTGATACCGAAACTGACAGCCTAGATTACATGGTGGCAAACTTGGTTGGTTTGTCAT
TTGCAACTGACGAAGGCATTGCTGCTTATGTACCAGTGGCCCACGACTACCTAGATGCGCCGCAGCAGCTGGATCGTGAT
TGGGTACTGGCACAGCTAAAGCCGATTCTTGAAGATGAGGCTCAGGCGAAAGTTGGTCAAAACCTAAAATACGATGCATC
TGTGCTGGCTCGCTACGGCATCGAGATGAAAGGCATCAAGCATGACACCATGTTGGCGTCTTACGTCTACAACAGTGTAG
GCGGCAAGCATGATATGGATAGCTTGGCACTGCGCTTCCTACAGCACAGCTGCATTTCATTCGAGCAAATCGCAGGTAAA
GGTAAAAACCAACTGACCTTCAACCAAATCGATCTGGATGAAGCTTCACCATATGCTGCAGAAGATGCAGACGTGACACT
TCGTCTGCATAACCGTTTGTTTGCTAACATCGAACAAGATGAAAAGCTAAAAACTGTATACGAAGAAATCGAAATGCCAC
TTGTGCCCGTGCTGTCTCGCATTGAGCGTACTGGTGTATTGATTGATGACATGAAGCTTAGCGCGCAATCTGTAGAAATT
GCTGCACGTCTGGACGAGCTTGAGCAAAAGGCGTACGAGATTGCAGAACAAGAGTTCAACATGAATTCTCCGAAGCAACT
GCAAGCGCTTCTGTTTGAGAAAATGGGTCTACCAGTTATCAATAAGACGCCATCTGGCACGCCTTCTACTAATGAAGAAG
TGCTGCAAGAGCTGGCTCTGGATTACCCACTACCAAAACTGATTTTGGAATACCGTGGTCTGGCGAAGCTAAAATCAACC
TACACCGACAAACTCCCGAAGATGATCAACCCATCAACGGGTCGTGTGCATACTTCTTACCACCAAGCGGTGACCGCAAC
GGGTCGTCTATCATCCACCGATCCTAACTTGCAGAACATCCCAATTCGTAATGAAGAAGGTCGTCGTATTCGTCAGGCAT
TCGTTGCCCCTACGGGTTACAAGATTCTGGCAGTCGACTACTCTCAAATCGAATTGCGTATTATGGCGCACCTATCAGGT
GACCAAGCACTGCTTGATGCGTTCCGTGACGGTAAAGATATCCACGCGGCAACCGCAGCAGAAATCATGGGCGTTTCTAT
TGAAGACGTTTCAAGTGAGCAACGTCGCCGTGCGAAAGCGGTTAACTTCGGTCTTATCTACGGCATGAGTGCGTTTGGTT
TGGCGAAGCAACTGGGCATTCCTCGTGGTGAGGCACAAGCGTACATGGACAAGTATTTCGAGCGCTACCCAGGCGTAATG
CAGTACATGGAAGACACGCGCAGTGCGGCTTCAGAGCAAGGTTTCGTCGAGACAATCTTTGGTCGTCGCTTGCACCTTCC
TGAAATTCAATCTCGCAACGGCATGCGTCGTAAGGCGGCAGAGCGTGCAGCGATCAACGCGCCGATGCAAGGCACCGCTG
CGGACATCATCAAGAAAGCGATGCTGTTAGTTGATCAGTGGATTCAAGAAGAAGGCAATGGTCGAGTGAAACTTCTGATG
CAAGTACACGATGAACTGGTGTTTGAAGTTGAAGAGTCGTCTTTGTCCGAAATTGAAAGTAAAGTACAGAATTTGATGGA
ATCTGCAGCAGAGCTAAAAGTGCCTCTAGTGGCAGAAGCGGGTCACGGTGACAACTGGGATCAAGCACACTAG

Upstream 100 bases:

>100_bases
AAATTTCCGCGACCTCGATCGAGCGAACAAGATAGATTCAGCTTAGCAGTCATGGCATTCTAAGCAGATCTATTAAGTAC
TGATTTGGATACAGACAATT

Downstream 100 bases:

>100_bases
TCATTTTTAAGCCAATTTAGCCGATTTAATATGAGCCAGCGCACAAACGCTGGCTTTTTTGTGCCATTAAAAAAGCAAAT
CCGATCTGAGATTTAATGTT

Product: DNA polymerase I

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>930_residues
MASIPENPLILIDGSSYLYRAFHAYPGTMSNGEIPTNAVYGVVNMLRSMMRQFASDRIAVVFDAKGKTFRDDMYPEYKAN
RPPMPDDLRCQIEPLHNVIRAMGLPLICIPGVEADDVIGTLAYQASQQGMPVLISTGDKDMAQLVDDNVTLINTMTNVVM
DREGVVEKFGIPPELIIDYLALMGDKVDNIPGVPGVGDKTATALLQGIGGLTKLYENLDDIAALGFRGSKTMAKKLVDNK
DNAMLSYELATIKLDVELEETPESLLKAEPSTDELIKLYGQLTFKSWLNELLEGGTGVVEADESTGAARGGSAASKADMD
TSAVKIDRSQYETILDEASFNAWLDKLKASELFAFDTETDSLDYMVANLVGLSFATDEGIAAYVPVAHDYLDAPQQLDRD
WVLAQLKPILEDEAQAKVGQNLKYDASVLARYGIEMKGIKHDTMLASYVYNSVGGKHDMDSLALRFLQHSCISFEQIAGK
GKNQLTFNQIDLDEASPYAAEDADVTLRLHNRLFANIEQDEKLKTVYEEIEMPLVPVLSRIERTGVLIDDMKLSAQSVEI
AARLDELEQKAYEIAEQEFNMNSPKQLQALLFEKMGLPVINKTPSGTPSTNEEVLQELALDYPLPKLILEYRGLAKLKST
YTDKLPKMINPSTGRVHTSYHQAVTATGRLSSTDPNLQNIPIRNEEGRRIRQAFVAPTGYKILAVDYSQIELRIMAHLSG
DQALLDAFRDGKDIHAATAAEIMGVSIEDVSSEQRRRAKAVNFGLIYGMSAFGLAKQLGIPRGEAQAYMDKYFERYPGVM
QYMEDTRSAASEQGFVETIFGRRLHLPEIQSRNGMRRKAAERAAINAPMQGTAADIIKKAMLLVDQWIQEEGNGRVKLLM
QVHDELVFEVEESSLSEIESKVQNLMESAAELKVPLVAEAGHGDNWDQAH

Sequences:
NA

Specific function: NA

COG id: COG0749

COG function: function code L; DNA polymerase I - 3'-5' exonuclease and polymerase domains

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA