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The map label for this gene is yliG [C]

Identifier: 156938206

GI number: 156938206

Start: 1277346

End: 1278617

Strand: Direct

Name: yliG [C]

Synonym: Igni_1419

Alternate gene names: 156938206

Gene position: 1277346-1278617 (Clockwise)

Preceding gene: 156938205

Following gene: 156938207

Centisome position: 98.44

GC content: 54.25

Gene sequence:

>1272_bases
ATGAAGATATACTACGAGACCTACGGCTGCGCAGTGATGCTCGGCGAAGCCGAGAGGGTGCTAGAGGAGCTGAAGAGCAA
AGGATACGAAGTTGTAGGGAGGCCCGAGGAGGCGGACGCGTCCATAATATTTACTTGCACAGTGAGGTCAGAAACCGAAC
AGAGGATGGCATGGCGCATAAAGGAGCTTTGCAAGGCTAGCAAGAAGTTGATCGTGACTGGCTGCCTCGCCAGCGCCCAA
CCGGGACTAGTGAAGATGGTCTGTCCCAGGGCGTCCATCGTCTCTAACTCTTCGTTACACGAAATTGAGCTTGCCTTAAA
GGGGGAGAAGAAGTACCTACTCAAGGGGCAGAGGCCCAGGGACTGGCTCAAGGGCGTAACGCCCGGCGGCTTTAGGGTAG
TAATCCCCATCGCCGACGGCTGCTTGGGCAATTGTACTTTCTGTATAACCAAAGTGGCCAGGCCGCGGCTTGTAAGCCAA
AGGCCAGACTCCATAATCGAATACGCGCTCAAGGGCGTCAAGAGGGGCGCCAAGGAGATCTGGTTGACGGCGCCGGACGT
AGCGGCCTACGGCAAGGAGATCGGTTTAGAATTGCCAGATCTGTTAGAGAAATTGTTGAAAGTCTTGCCGGAAAATGTAT
ACGTCAGGGTAGGCATGATGAGTCCAGACACCTTTCGCGAGGTAATGGATAGAACTATAGACGTCATGAGGGATCCAAGA
GTCTTCAAGTTCTTTCACTTACCGCTCCAGAGCGCCAGCGACAAGGTGTTGAGGTTAATGGGAAGGAGGTATACGTACTC
GGAGTTTGTAGAGATAGTCAACAAGGTGAGAAAGGCCTTCAACGACCCCACTATAGCCACTGACGTCATGGTCGGCTTCC
CCGGCGAGGAAGAGGACGATTTCGAGTTGACGCTTAAGGCGTTGAGGGAGTTGGCCTTCGAGAGGGTTCACCTAGCCGCC
TATACTCCGAGGCCCCTAACCTTGGGGGCCCGGATGCCCCAAGTAAGGGAGGACGTTAAGTCCAGGCGCGTTAAGAGGGC
CATGAACGTGATAGAGGCCGTAGGCGTTGAGGTTCACAAGAGGTACGTCGGCGGGAAGTTTAAGGCATTTGTGGACGAGT
ACGACCAGAAGCACGGGACCTTTGTGGCGAGGCTCTGGAACTACACGCCGGTGGTCCTAAGGGAGGAGAGCTCCTTAGGG
GAAGAGATAGTAGTTAAAATTGAAGGCGCCACGTTCTACGACCTAAGGGGTACCGTTTGGTCAGTAAGCTAG

Upstream 100 bases:

>100_bases
GGTTATGAGAGGAAAAGTCCCGTTGAGGGTGAGCGTCGAACTAAGCCCGGAGCTCGCCGTACGCTAATTTTTAAACGCGT
CTCGTTTTTACTAGCCTGCA

Downstream 100 bases:

>100_bases
CGGCTTGGGCGATAGCGCATTTCATAGTGGTAGCATTCATAATAGTTCACGTTACGTGTCGGACGAACGCGTACGTACTC
AGAACACACTTGTTAGAGTT

Product: RNA modification protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 423; Mature: 423

Protein sequence:

>423_residues
MKIYYETYGCAVMLGEAERVLEELKSKGYEVVGRPEEADASIIFTCTVRSETEQRMAWRIKELCKASKKLIVTGCLASAQ
PGLVKMVCPRASIVSNSSLHEIELALKGEKKYLLKGQRPRDWLKGVTPGGFRVVIPIADGCLGNCTFCITKVARPRLVSQ
RPDSIIEYALKGVKRGAKEIWLTAPDVAAYGKEIGLELPDLLEKLLKVLPENVYVRVGMMSPDTFREVMDRTIDVMRDPR
VFKFFHLPLQSASDKVLRLMGRRYTYSEFVEIVNKVRKAFNDPTIATDVMVGFPGEEEDDFELTLKALRELAFERVHLAA
YTPRPLTLGARMPQVREDVKSRRVKRAMNVIEAVGVEVHKRYVGGKFKAFVDEYDQKHGTFVARLWNYTPVVLREESSLG
EEIVVKIEGATFYDLRGTVWSVS

Sequences:

>Translated_423_residues
MKIYYETYGCAVMLGEAERVLEELKSKGYEVVGRPEEADASIIFTCTVRSETEQRMAWRIKELCKASKKLIVTGCLASAQ
PGLVKMVCPRASIVSNSSLHEIELALKGEKKYLLKGQRPRDWLKGVTPGGFRVVIPIADGCLGNCTFCITKVARPRLVSQ
RPDSIIEYALKGVKRGAKEIWLTAPDVAAYGKEIGLELPDLLEKLLKVLPENVYVRVGMMSPDTFREVMDRTIDVMRDPR
VFKFFHLPLQSASDKVLRLMGRRYTYSEFVEIVNKVRKAFNDPTIATDVMVGFPGEEEDDFELTLKALRELAFERVHLAA
YTPRPLTLGARMPQVREDVKSRRVKRAMNVIEAVGVEVHKRYVGGKFKAFVDEYDQKHGTFVARLWNYTPVVLREESSLG
EEIVVKIEGATFYDLRGTVWSVS
>Mature_423_residues
MKIYYETYGCAVMLGEAERVLEELKSKGYEVVGRPEEADASIIFTCTVRSETEQRMAWRIKELCKASKKLIVTGCLASAQ
PGLVKMVCPRASIVSNSSLHEIELALKGEKKYLLKGQRPRDWLKGVTPGGFRVVIPIADGCLGNCTFCITKVARPRLVSQ
RPDSIIEYALKGVKRGAKEIWLTAPDVAAYGKEIGLELPDLLEKLLKVLPENVYVRVGMMSPDTFREVMDRTIDVMRDPR
VFKFFHLPLQSASDKVLRLMGRRYTYSEFVEIVNKVRKAFNDPTIATDVMVGFPGEEEDDFELTLKALRELAFERVHLAA
YTPRPLTLGARMPQVREDVKSRRVKRAMNVIEAVGVEVHKRYVGGKFKAFVDEYDQKHGTFVARLWNYTPVVLREESSLG
EEIVVKIEGATFYDLRGTVWSVS

Specific function: Unknown

COG id: COG0621

COG function: function code J; 2-methylthioadenine synthetase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 TRAM domain [H]

Homologues:

Organism=Homo sapiens, GI93277076, Length=431, Percent_Identity=32.0185614849188, Blast_Score=221, Evalue=8e-58,
Organism=Homo sapiens, GI28872784, Length=486, Percent_Identity=24.8971193415638, Blast_Score=123, Evalue=3e-28,
Organism=Homo sapiens, GI28872782, Length=486, Percent_Identity=24.8971193415638, Blast_Score=123, Evalue=4e-28,
Organism=Escherichia coli, GI1787057, Length=443, Percent_Identity=28.6681715575621, Blast_Score=156, Evalue=2e-39,
Organism=Escherichia coli, GI1786882, Length=396, Percent_Identity=27.7777777777778, Blast_Score=136, Evalue=2e-33,
Organism=Caenorhabditis elegans, GI71996771, Length=353, Percent_Identity=32.2946175637394, Blast_Score=167, Evalue=8e-42,
Organism=Caenorhabditis elegans, GI17553146, Length=429, Percent_Identity=23.3100233100233, Blast_Score=99, Evalue=5e-21,
Organism=Drosophila melanogaster, GI19922432, Length=434, Percent_Identity=31.5668202764977, Blast_Score=220, Evalue=2e-57,
Organism=Drosophila melanogaster, GI21356207, Length=494, Percent_Identity=25.7085020242915, Blast_Score=132, Evalue=5e-31,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006638
- InterPro:   IPR005839
- InterPro:   IPR020612
- InterPro:   IPR013848
- InterPro:   IPR006466
- InterPro:   IPR007197
- InterPro:   IPR002792 [H]

Pfam domain/function: PF04055 Radical_SAM; PF01938 TRAM; PF00919 UPF0004 [H]

EC number: NA

Molecular weight: Translated: 47868; Mature: 47868

Theoretical pI: Translated: 9.08; Mature: 9.08

Prosite motif: PS50926 TRAM

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIYYETYGCAVMLGEAERVLEELKSKGYEVVGRPEEADASIIFTCTVRSETEQRMAWRI
CEEEEEECCEEEEECCHHHHHHHHHHCCCEEECCCCCCCCEEEEEEEECCCHHHHHHHHH
KELCKASKKLIVTGCLASAQPGLVKMVCPRASIVSNSSLHEIELALKGEKKYLLKGQRPR
HHHHHHCCCEEEEEECCCCCCCCEEEECCCHHHHCCCCCEEEEEEEECCCEEEECCCCCH
DWLKGVTPGGFRVVIPIADGCLGNCTFCITKVARPRLVSQRPDSIIEYALKGVKRGAKEI
HHHCCCCCCCCEEEEEECCCCCCCHHHHHHHHHCCHHHCCCCHHHHHHHHHHHHCCCHHE
WLTAPDVAAYGKEIGLELPDLLEKLLKVLPENVYVRVGMMSPDTFREVMDRTIDVMRDPR
EEECCCHHHHHHHHCCCHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHCCCC
VFKFFHLPLQSASDKVLRLMGRRYTYSEFVEIVNKVRKAFNDPTIATDVMVGFPGEEEDD
EEEEEECCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCH
FELTLKALRELAFERVHLAAYTPRPLTLGARMPQVREDVKSRRVKRAMNVIEAVGVEVHK
HHHHHHHHHHHHHHHHHEEEECCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RYVGGKFKAFVDEYDQKHGTFVARLWNYTPVVLREESSLGEEIVVKIEGATFYDLRGTVW
HHHCCHHHHHHHHHHHHCCCEEEHHHCCCCEEEECCCCCCCEEEEEECCCEEEECCCEEE
SVS
ECC
>Mature Secondary Structure
MKIYYETYGCAVMLGEAERVLEELKSKGYEVVGRPEEADASIIFTCTVRSETEQRMAWRI
CEEEEEECCEEEEECCHHHHHHHHHHCCCEEECCCCCCCCEEEEEEEECCCHHHHHHHHH
KELCKASKKLIVTGCLASAQPGLVKMVCPRASIVSNSSLHEIELALKGEKKYLLKGQRPR
HHHHHHCCCEEEEEECCCCCCCCEEEECCCHHHHCCCCCEEEEEEEECCCEEEECCCCCH
DWLKGVTPGGFRVVIPIADGCLGNCTFCITKVARPRLVSQRPDSIIEYALKGVKRGAKEI
HHHCCCCCCCCEEEEEECCCCCCCHHHHHHHHHCCHHHCCCCHHHHHHHHHHHHCCCHHE
WLTAPDVAAYGKEIGLELPDLLEKLLKVLPENVYVRVGMMSPDTFREVMDRTIDVMRDPR
EEECCCHHHHHHHHCCCHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHCCCC
VFKFFHLPLQSASDKVLRLMGRRYTYSEFVEIVNKVRKAFNDPTIATDVMVGFPGEEEDD
EEEEEECCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCH
FELTLKALRELAFERVHLAAYTPRPLTLGARMPQVREDVKSRRVKRAMNVIEAVGVEVHK
HHHHHHHHHHHHHHHHHEEEECCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RYVGGKFKAFVDEYDQKHGTFVARLWNYTPVVLREESSLGEEIVVKIEGATFYDLRGTVW
HHHCCHHHHHHHHHHHHCCCEEEHHHCCCCEEEECCCCCCCEEEEEECCCEEEECCCEEE
SVS
ECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 12622808 [H]