| Definition | Ignicoccus hospitalis KIN4/I chromosome, complete genome. |
|---|---|
| Accession | NC_009776 |
| Length | 1,297,538 |
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The map label for this gene is 156938106
Identifier: 156938106
GI number: 156938106
Start: 1172865
End: 1173842
Strand: Reverse
Name: 156938106
Synonym: Igni_1319
Alternate gene names: NA
Gene position: 1173842-1172865 (Counterclockwise)
Preceding gene: 156938109
Following gene: 156938104
Centisome position: 90.47
GC content: 55.73
Gene sequence:
>978_bases GTGGGCCGGAAGGACGGGGTGGATATATTGCCTGAGAGGGTCAAAGAGGTAAAAGTTAAGGAAGAGAAGAAAGCGGTCCT CTTGCCAGAGGAGGTCCCCGAGGAACTCACTCTGGGCAAGGCCTTGCAAGTGCGAGAGGCGGCCAGGGCCCCGGCGGTGG TCGTTTATAACAAGCATGAGCTCTTGGTAAACTTGAAACCCTTGGTGAGGAAGACAGACGAGGAAGTCATTCCGGTGTTA AGGGACCCCTACACCAAGAGGACCGACGGCTTCCTAACTCAGTTCGAGCTGATGGTCCCTACTTCCCACCGTTCCCGCTT CAGCGTCCTCGACTTCATGCACGAGTTCCCCATGTTTAAGCCGGACGACGACTTGTTGCGCGTCGTGAGGGAGTTGGAGG ACAAGAGGGTCAGAGGGGCTCCGGTGGTGGACGAGGAGGGCAAGCTGCTCGGGGTTGTGGACTACTTCGACTTGCTGCGC TTGCTAAAGCACCACTTGCCCGGCGAGCCCGAGCTTAAGGTAAAGGACGTAATGAGGACCGGCGAGGAGTACGCGATAGA CTGGAACGAAAAGGTGAACAAGGCTTGGCACAAATTGATAAACAAGTTCTTGCCGGGCTTGGTAGTGGTCGCAAAGGACG AGGAGAACAAGGTCAAGGGAATAATAACCTATAAGGAGTTCGTGAAGACCAACAGGTGGTTCATACATAGGGAGGGCGAA CACATGAGCGTTCCAATGGCTAAGGTAAAAACCATAATGATGAGGGGGGTTCCCTCCCTCAGTCCAGAAGACAGCGTAAC CGTTGCCTTGGACAAGTTCTTAGTGTTCAGAGAGCCAGTGATCCCTGTGGTGGACGAAGAGGGGAGGTACGTCGGGGCCC TCTTCGTGGAGGACTTGGTGAGGGCTCTGGCGAGGCTGCCTAGGAAGGCCGTCGAGAAGAGCGAGACCGTCGAGGTGCGC GAGAAGGAAGCCTCTTAG
Upstream 100 bases:
>100_bases TCCTTGTACACGAAGAGCTTCGGCGGCCTCACGGAGGCAGTGACGCCCAGCAGCTCTTCCAGCAAGCGCGTGCTCTTCTT ATAATCCATGATGCGCATCC
Downstream 100 bases:
>100_bases CTACAGCTCTCACCGCCAGCGCCCCGACGGCCGCGACCGGCGGAGGGGGGACGTAGCCGAAACTCACTACGAGCTCCCCT TCAAACCTAGCCTTTACTAA
Product: hypothetical protein
Products: NA
Alternate protein names: Signal Transduction Protein; Signal-Transduction Protein
Number of amino acids: Translated: 325; Mature: 324
Protein sequence:
>325_residues MGRKDGVDILPERVKEVKVKEEKKAVLLPEEVPEELTLGKALQVREAARAPAVVVYNKHELLVNLKPLVRKTDEEVIPVL RDPYTKRTDGFLTQFELMVPTSHRSRFSVLDFMHEFPMFKPDDDLLRVVRELEDKRVRGAPVVDEEGKLLGVVDYFDLLR LLKHHLPGEPELKVKDVMRTGEEYAIDWNEKVNKAWHKLINKFLPGLVVVAKDEENKVKGIITYKEFVKTNRWFIHREGE HMSVPMAKVKTIMMRGVPSLSPEDSVTVALDKFLVFREPVIPVVDEEGRYVGALFVEDLVRALARLPRKAVEKSETVEVR EKEAS
Sequences:
>Translated_325_residues MGRKDGVDILPERVKEVKVKEEKKAVLLPEEVPEELTLGKALQVREAARAPAVVVYNKHELLVNLKPLVRKTDEEVIPVL RDPYTKRTDGFLTQFELMVPTSHRSRFSVLDFMHEFPMFKPDDDLLRVVRELEDKRVRGAPVVDEEGKLLGVVDYFDLLR LLKHHLPGEPELKVKDVMRTGEEYAIDWNEKVNKAWHKLINKFLPGLVVVAKDEENKVKGIITYKEFVKTNRWFIHREGE HMSVPMAKVKTIMMRGVPSLSPEDSVTVALDKFLVFREPVIPVVDEEGRYVGALFVEDLVRALARLPRKAVEKSETVEVR EKEAS >Mature_324_residues GRKDGVDILPERVKEVKVKEEKKAVLLPEEVPEELTLGKALQVREAARAPAVVVYNKHELLVNLKPLVRKTDEEVIPVLR DPYTKRTDGFLTQFELMVPTSHRSRFSVLDFMHEFPMFKPDDDLLRVVRELEDKRVRGAPVVDEEGKLLGVVDYFDLLRL LKHHLPGEPELKVKDVMRTGEEYAIDWNEKVNKAWHKLINKFLPGLVVVAKDEENKVKGIITYKEFVKTNRWFIHREGEH MSVPMAKVKTIMMRGVPSLSPEDSVTVALDKFLVFREPVIPVVDEEGRYVGALFVEDLVRALARLPRKAVEKSETVEVRE KEAS
Specific function: Unknown
COG id: COG0517
COG function: function code R; FOG: CBS domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37403; Mature: 37272
Theoretical pI: Translated: 6.99; Mature: 6.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGRKDGVDILPERVKEVKVKEEKKAVLLPEEVPEELTLGKALQVREAARAPAVVVYNKHE CCCCCCCHHHHHHHHHHHHHHCCCEEECCHHCCHHHHHHHHHHHHHHHCCCEEEEEECCE LLVNLKPLVRKTDEEVIPVLRDPYTKRTDGFLTQFELMVPTSHRSRFSVLDFMHEFPMFK EEEECHHHHHCCCHHHHHHHCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHCCCCC PDDDLLRVVRELEDKRVRGAPVVDEEGKLLGVVDYFDLLRLLKHHLPGEPELKVKDVMRT CCHHHHHHHHHHHHCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHCCCCCCCHHHHHHHC GEEYAIDWNEKVNKAWHKLINKFLPGLVVVAKDEENKVKGIITYKEFVKTNRWFIHREGE CCCEEECHHHHHHHHHHHHHHHHCCCEEEEEECCCCCEEEEEEHHHHHHCCCEEEEECCC HMSVPMAKVKTIMMRGVPSLSPEDSVTVALDKFLVFREPVIPVVDEEGRYVGALFVEDLV CCCCCHHHHHHHHHHCCCCCCCCCCEEHHHHHHHHHHCCCCCEECCCCCEEHHHHHHHHH RALARLPRKAVEKSETVEVREKEAS HHHHHCCHHHHCCCHHHHHHHCCCC >Mature Secondary Structure GRKDGVDILPERVKEVKVKEEKKAVLLPEEVPEELTLGKALQVREAARAPAVVVYNKHE CCCCCCHHHHHHHHHHHHHHCCCEEECCHHCCHHHHHHHHHHHHHHHCCCEEEEEECCE LLVNLKPLVRKTDEEVIPVLRDPYTKRTDGFLTQFELMVPTSHRSRFSVLDFMHEFPMFK EEEECHHHHHCCCHHHHHHHCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHCCCCC PDDDLLRVVRELEDKRVRGAPVVDEEGKLLGVVDYFDLLRLLKHHLPGEPELKVKDVMRT CCHHHHHHHHHHHHCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHCCCCCCCHHHHHHHC GEEYAIDWNEKVNKAWHKLINKFLPGLVVVAKDEENKVKGIITYKEFVKTNRWFIHREGE CCCEEECHHHHHHHHHHHHHHHHCCCEEEEEECCCCCEEEEEEHHHHHHCCCEEEEECCC HMSVPMAKVKTIMMRGVPSLSPEDSVTVALDKFLVFREPVIPVVDEEGRYVGALFVEDLV CCCCCHHHHHHHHHHCCCCCCCCCCEEHHHHHHHHHHCCCCCEECCCCCEEHHHHHHHHH RALARLPRKAVEKSETVEVREKEAS HHHHHCCHHHHCCCHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA