| Definition | Ignicoccus hospitalis KIN4/I chromosome, complete genome. |
|---|---|
| Accession | NC_009776 |
| Length | 1,297,538 |
Click here to switch to the map view.
The map label for this gene is 156938103
Identifier: 156938103
GI number: 156938103
Start: 1170657
End: 1171685
Strand: Direct
Name: 156938103
Synonym: Igni_1316
Alternate gene names: NA
Gene position: 1170657-1171685 (Clockwise)
Preceding gene: 156938102
Following gene: 156938105
Centisome position: 90.22
GC content: 58.7
Gene sequence:
>1029_bases GTGGTACGCCCCAAACGCCGCCTACCCGCTGACAGTAGCAGTTTACGCGCTGGCGCTGGTATTAATGGTGTTAGCGTTGG TAAGGCTCTTCTCCTAACCCTAGCGCTCTCTACCGTCGCCCTGAGCTGCGTACAAGTTACCCGTTCGTTCGTCCAGCTCT CGGACGAGTCGGAGCTGAAGCTCCGGGTATCCGTCACTTGCCCGGGCGACGTGGAAGTCAGGATAGAGGCGGACGTGGCG CCCTACTCCGCAACCGGCCCTCTGAAGGCCGAAGGGGGCTCTTACGTCCTCGCAACGGATAAGGAAGGGGAGCTCTGGGC GTCCTTGCGCTTCCCTGGCAATCACCCCCACATAACGATAAAGGTGTATTACGAGTCCCAGCTGGTCGACGAAACCGTCG TTAACCCCAAGGGCTGCGTAGCAGTAACCCTTCGTCCCTCCGAGGACGGCAAGGTAGTCGGCTTGGTAGTGGAGAACTTG TGCGAGAAGGAGGTAGAAGTCCCCATAAAGGTGGTCGGAGAGGGCGCAACAGAGTCGCTGAAGAGGTCTACGTGCGTCGA GAAGGTGGCCAAGCTGGGCTACGCGCGCGAGTGCGTCGAGTGGACTTGTGCTAAGTGGCTCTACGCCAGTACATGCGCGA AGAAGAGGGTCACGTGCGTTGACGGCGAGTGCGAGGAGCGGTGCGAACTCAAGCTTACCGTACCTACCGCCTGCGAGAAG TGGGCGTGTTCCAAAACGCAAATGGTTCCGACAGTAAAGTACGAGTGTACCAAGCATGATGTAGAGGCGGTTAGGAGCTC GTGGCCCCCTTCCGGCGAGGGGACCTTCGAGGGGATTCTGAAGCTAGGGCCCAAGGAGACGAAGGCGCTTAGGTTCGTCT TCAAAGGAGGCGCGAGGAAGGCTATCGTAGGGGAGTTCGAAGCGGAGCTCCCGGGGCCCCCTCCCCCGCCTTTCGAGGTG AATTACCTGCCTATGATAATAAGCTTGGTCGTTATAGTTTTCTCCTTGTCAGTGCTCCTCACTTCTTGA
Upstream 100 bases:
>100_bases TCTCCAACGTCACGCCGGCCTTTTACCTAGGCTTCTTGGAGGACAGAGCGAAAGTGCCTTTGGCGGTAGTTAAGGTAGGA GACGAGGAGCTGACCATACC
Downstream 100 bases:
>100_bases TCCTCGTCGCCTCCTTCAAGAGCGCCTCCACTTGGGCGCCTACTGCTCCCTCGTCGTAAGGGGGGTAGGGCTTGCCCTCC TCCAAGTCCAAGGGCCCGGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 342; Mature: 342
Protein sequence:
>342_residues MVRPKRRLPADSSSLRAGAGINGVSVGKALLLTLALSTVALSCVQVTRSFVQLSDESELKLRVSVTCPGDVEVRIEADVA PYSATGPLKAEGGSYVLATDKEGELWASLRFPGNHPHITIKVYYESQLVDETVVNPKGCVAVTLRPSEDGKVVGLVVENL CEKEVEVPIKVVGEGATESLKRSTCVEKVAKLGYARECVEWTCAKWLYASTCAKKRVTCVDGECEERCELKLTVPTACEK WACSKTQMVPTVKYECTKHDVEAVRSSWPPSGEGTFEGILKLGPKETKALRFVFKGGARKAIVGEFEAELPGPPPPPFEV NYLPMIISLVVIVFSLSVLLTS
Sequences:
>Translated_342_residues MVRPKRRLPADSSSLRAGAGINGVSVGKALLLTLALSTVALSCVQVTRSFVQLSDESELKLRVSVTCPGDVEVRIEADVA PYSATGPLKAEGGSYVLATDKEGELWASLRFPGNHPHITIKVYYESQLVDETVVNPKGCVAVTLRPSEDGKVVGLVVENL CEKEVEVPIKVVGEGATESLKRSTCVEKVAKLGYARECVEWTCAKWLYASTCAKKRVTCVDGECEERCELKLTVPTACEK WACSKTQMVPTVKYECTKHDVEAVRSSWPPSGEGTFEGILKLGPKETKALRFVFKGGARKAIVGEFEAELPGPPPPPFEV NYLPMIISLVVIVFSLSVLLTS >Mature_342_residues MVRPKRRLPADSSSLRAGAGINGVSVGKALLLTLALSTVALSCVQVTRSFVQLSDESELKLRVSVTCPGDVEVRIEADVA PYSATGPLKAEGGSYVLATDKEGELWASLRFPGNHPHITIKVYYESQLVDETVVNPKGCVAVTLRPSEDGKVVGLVVENL CEKEVEVPIKVVGEGATESLKRSTCVEKVAKLGYARECVEWTCAKWLYASTCAKKRVTCVDGECEERCELKLTVPTACEK WACSKTQMVPTVKYECTKHDVEAVRSSWPPSGEGTFEGILKLGPKETKALRFVFKGGARKAIVGEFEAELPGPPPPPFEV NYLPMIISLVVIVFSLSVLLTS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37019; Mature: 37019
Theoretical pI: Translated: 7.12; Mature: 7.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.1 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 4.1 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVRPKRRLPADSSSLRAGAGINGVSVGKALLLTLALSTVALSCVQVTRSFVQLSDESELK CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEE LRVSVTCPGDVEVRIEADVAPYSATGPLKAEGGSYVLATDKEGELWASLRFPGNHPHITI EEEEEECCCCEEEEEEECCCCCCCCCCCEECCCCEEEEECCCCCEEEEEECCCCCCEEEE KVYYESQLVDETVVNPKGCVAVTLRPSEDGKVVGLVVENLCEKEVEVPIKVVGEGATESL EEEECCHHHHHHHCCCCCEEEEEEECCCCCCEEHHHHHHHHHHHCCCCEEEECCCHHHHH KRSTCVEKVAKLGYARECVEWTCAKWLYASTCAKKRVTCVDGECEERCELKLTVPTACEK HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCEEEEECCCCHHH WACSKTQMVPTVKYECTKHDVEAVRSSWPPSGEGTFEGILKLGPKETKALRFVFKGGARK HCCCCCCCCCEEEEECCHHHHHHHHHCCCCCCCCHHHHHHHCCCCHHHHEEEEECCCCCE AIVGEFEAELPGPPPPPFEVNYLPMIISLVVIVFSLSVLLTS EEEECHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MVRPKRRLPADSSSLRAGAGINGVSVGKALLLTLALSTVALSCVQVTRSFVQLSDESELK CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEE LRVSVTCPGDVEVRIEADVAPYSATGPLKAEGGSYVLATDKEGELWASLRFPGNHPHITI EEEEEECCCCEEEEEEECCCCCCCCCCCEECCCCEEEEECCCCCEEEEEECCCCCCEEEE KVYYESQLVDETVVNPKGCVAVTLRPSEDGKVVGLVVENLCEKEVEVPIKVVGEGATESL EEEECCHHHHHHHCCCCCEEEEEEECCCCCCEEHHHHHHHHHHHCCCCEEEECCCHHHHH KRSTCVEKVAKLGYARECVEWTCAKWLYASTCAKKRVTCVDGECEERCELKLTVPTACEK HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCEEEEECCCCHHH WACSKTQMVPTVKYECTKHDVEAVRSSWPPSGEGTFEGILKLGPKETKALRFVFKGGARK HCCCCCCCCCEEEEECCHHHHHHHHHCCCCCCCCHHHHHHHCCCCHHHHEEEEECCCCCE AIVGEFEAELPGPPPPPFEVNYLPMIISLVVIVFSLSVLLTS EEEECHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA