| Definition | Ignicoccus hospitalis KIN4/I chromosome, complete genome. |
|---|---|
| Accession | NC_009776 |
| Length | 1,297,538 |
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The map label for this gene is 156938100
Identifier: 156938100
GI number: 156938100
Start: 1168413
End: 1168949
Strand: Direct
Name: 156938100
Synonym: Igni_1313
Alternate gene names: NA
Gene position: 1168413-1168949 (Clockwise)
Preceding gene: 156938099
Following gene: 156938101
Centisome position: 90.05
GC content: 51.4
Gene sequence:
>537_bases ATGGACCCTCTAACCCTCGCCCTCCACGTTTGTCTAACGTTAAACGCCACGGTTACTTCATTTCTAGCTAAAGGAGGTCT GTACGTCAACGCGTTCGCAAACTACTTCCACTACTACGCGTCAACATTAGAGTTCTGCGTCGCTGCCAATCATACTGCCA AACTTCTGAAAGAGATAAAGACTTTGGACGCCCTAGCCGCGGAAGTCCTCCAGAGGCCTCCGGAAGTTCAAAAAGTACTG AAACTTACCAAGCTCGTAAAGGAAATGAAAGTCTTAATCAGTCAGCTCAACTGTACCTTGAAGGAGCTCGAGAGAGCCTC TAGCGCCCTAGAGGACTTGCCCACTGTCAAGTGCGTCGGTGAGACTAGCAACCCGTACCTCGAGGTGTTCTGCGCGCTCT CGGACGCTGTTGAAAGAATTAGGACTAACGAACCGGGGCTCGTTCAGTACTTGAAGTCCAACGCGCTCGAGGCGAGCCAG AAGGTTTCCTATTATGAGAGCGCTTTAATTGGGTGCAGGATGCCCTCCTCCGGGTAG
Upstream 100 bases:
>100_bases AAGCCGAGCGCTCTTCCAGGCTGAGCTACCGGCCCGTCGGCTGGGCTCCCTTCTACCTTATAAGTTTAATACCACGACGT TCCTCCCCTCCGGGAGGAGA
Downstream 100 bases:
>100_bases GCTTTTTGCTAACGCTCTTGGCCCTCGCGGCGCTCCCCTCTTTTGCCGACATAGCGTTCAAGATATTTAATATCAACAAA ACTTACGTAATAAACGTAGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 178; Mature: 178
Protein sequence:
>178_residues MDPLTLALHVCLTLNATVTSFLAKGGLYVNAFANYFHYYASTLEFCVAANHTAKLLKEIKTLDALAAEVLQRPPEVQKVL KLTKLVKEMKVLISQLNCTLKELERASSALEDLPTVKCVGETSNPYLEVFCALSDAVERIRTNEPGLVQYLKSNALEASQ KVSYYESALIGCRMPSSG
Sequences:
>Translated_178_residues MDPLTLALHVCLTLNATVTSFLAKGGLYVNAFANYFHYYASTLEFCVAANHTAKLLKEIKTLDALAAEVLQRPPEVQKVL KLTKLVKEMKVLISQLNCTLKELERASSALEDLPTVKCVGETSNPYLEVFCALSDAVERIRTNEPGLVQYLKSNALEASQ KVSYYESALIGCRMPSSG >Mature_178_residues MDPLTLALHVCLTLNATVTSFLAKGGLYVNAFANYFHYYASTLEFCVAANHTAKLLKEIKTLDALAAEVLQRPPEVQKVL KLTKLVKEMKVLISQLNCTLKELERASSALEDLPTVKCVGETSNPYLEVFCALSDAVERIRTNEPGLVQYLKSNALEASQ KVSYYESALIGCRMPSSG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19578; Mature: 19578
Theoretical pI: Translated: 7.30; Mature: 7.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.4 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 3.4 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDPLTLALHVCLTLNATVTSFLAKGGLYVNAFANYFHYYASTLEFCVAANHTAKLLKEIK CCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH TLDALAAEVLQRPPEVQKVLKLTKLVKEMKVLISQLNCTLKELERASSALEDLPTVKCVG HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEC ETSNPYLEVFCALSDAVERIRTNEPGLVQYLKSNALEASQKVSYYESALIGCRMPSSG CCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MDPLTLALHVCLTLNATVTSFLAKGGLYVNAFANYFHYYASTLEFCVAANHTAKLLKEIK CCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH TLDALAAEVLQRPPEVQKVLKLTKLVKEMKVLISQLNCTLKELERASSALEDLPTVKCVG HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEC ETSNPYLEVFCALSDAVERIRTNEPGLVQYLKSNALEASQKVSYYESALIGCRMPSSG CCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA