| Definition | Ignicoccus hospitalis KIN4/I chromosome, complete genome. |
|---|---|
| Accession | NC_009776 |
| Length | 1,297,538 |
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The map label for this gene is 156938096
Identifier: 156938096
GI number: 156938096
Start: 1165200
End: 1165676
Strand: Reverse
Name: 156938096
Synonym: Igni_1309
Alternate gene names: NA
Gene position: 1165676-1165200 (Counterclockwise)
Preceding gene: 156938097
Following gene: 156938095
Centisome position: 89.84
GC content: 57.02
Gene sequence:
>477_bases TTGGCGCTGATCCTCGTAGCTCTACCAGTCTTAGCAAACAACTACATCGCCTTGACCCTCAAGCCAGGGACGGGCGGTGT GGTGATAACCTACACCTACACCGTGGCTTTAACGGTAGGCCCGTTCTCCTTCACCACTCAAGGAGTTAAGGAAGCTCCTA ACGTGCCGTTTACTACCACCATAGACATAGACCACACGCCAACGCTGATAGGCAACTTGGAGGTAGTAGGTTCGATAAAC GTGACGGCCAGCGACGACCTCGGCAACGTGGCTACGGGCTCCCAAAACTTCACGCTGCTCCTCGAGCCCAACAAGACTGC CTCCGCCGTCATTAACATAACCTTGAGCAACGGCGGCGAGTTAGACGCCGAGATAGTCATGTATGCCGCCAAGCTATCCA TCCCGTTCGCCGGGATAGCGGCCCTCGGGGCAGCCGCCCTCTTGGGGGCTAGGAAGCGGAGGCAGAGGAACTCCTAA
Upstream 100 bases:
>100_bases TACTAAACGTTAAGGTAGTGGAGTAGCCCAGACACCCTAGTTTTAAAGGCTCGAACCGTCTATTCCGCTGATGCGGTGAG GTGCGGTGAGGAAAGGCCTA
Downstream 100 bases:
>100_bases CTTAACGCACTTAGTCTTTGTTTTTTAAGCTACCTTAGTGTACAGACGCGTTCTCAAGACTCAAATCTATCCTTCCGCCT TAAACCGAGGGTGGACGACG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 158; Mature: 157
Protein sequence:
>158_residues MALILVALPVLANNYIALTLKPGTGGVVITYTYTVALTVGPFSFTTQGVKEAPNVPFTTTIDIDHTPTLIGNLEVVGSIN VTASDDLGNVATGSQNFTLLLEPNKTASAVINITLSNGGELDAEIVMYAAKLSIPFAGIAALGAAALLGARKRRQRNS
Sequences:
>Translated_158_residues MALILVALPVLANNYIALTLKPGTGGVVITYTYTVALTVGPFSFTTQGVKEAPNVPFTTTIDIDHTPTLIGNLEVVGSIN VTASDDLGNVATGSQNFTLLLEPNKTASAVINITLSNGGELDAEIVMYAAKLSIPFAGIAALGAAALLGARKRRQRNS >Mature_157_residues ALILVALPVLANNYIALTLKPGTGGVVITYTYTVALTVGPFSFTTQGVKEAPNVPFTTTIDIDHTPTLIGNLEVVGSINV TASDDLGNVATGSQNFTLLLEPNKTASAVINITLSNGGELDAEIVMYAAKLSIPFAGIAALGAAALLGARKRRQRNS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16342; Mature: 16211
Theoretical pI: Translated: 5.80; Mature: 5.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 0.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALILVALPVLANNYIALTLKPGTGGVVITYTYTVALTVGPFSFTTQGVKEAPNVPFTTT CEEEEEEEHHHCCCEEEEEEECCCCCEEEEEEEEEEEEECCCCCCCCCHHHCCCCCEEEE IDIDHTPTLIGNLEVVGSINVTASDDLGNVATGSQNFTLLLEPNKTASAVINITLSNGGE EECCCCCEEEECEEEEEEEEEEECCCCCCEEECCCCEEEEECCCCCCEEEEEEEECCCCC LDAEIVMYAAKLSIPFAGIAALGAAALLGARKRRQRNS CCCEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure ALILVALPVLANNYIALTLKPGTGGVVITYTYTVALTVGPFSFTTQGVKEAPNVPFTTT EEEEEEEHHHCCCEEEEEEECCCCCEEEEEEEEEEEEECCCCCCCCCHHHCCCCCEEEE IDIDHTPTLIGNLEVVGSINVTASDDLGNVATGSQNFTLLLEPNKTASAVINITLSNGGE EECCCCCEEEECEEEEEEEEEEECCCCCCEEECCCCEEEEECCCCCCEEEEEEEECCCCC LDAEIVMYAAKLSIPFAGIAALGAAALLGARKRRQRNS CCCEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA