| Definition | Ignicoccus hospitalis KIN4/I chromosome, complete genome. |
|---|---|
| Accession | NC_009776 |
| Length | 1,297,538 |
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The map label for this gene is 156938091
Identifier: 156938091
GI number: 156938091
Start: 1158918
End: 1160228
Strand: Direct
Name: 156938091
Synonym: Igni_1304
Alternate gene names: NA
Gene position: 1158918-1160228 (Clockwise)
Preceding gene: 156938089
Following gene: 156938094
Centisome position: 89.32
GC content: 58.2
Gene sequence:
>1311_bases TTGAACACGCTTCTAAAATACTACAAGCTGCTCGTGACACTGCCGAGGGACGAGGTCGCCTACGCGCTGGCCGCCCTCTC GGCTTCTGCCTTGAGCCTTAGAGACCCCTTAACGCTGCTCTCCCTAATCGTCTTTTCTATTTTATTTTACGAGGAAAGGG TGCTGAACGGGAGGAGGCTCGCCTTCCTTATTGCTCTATCCTCTCTCGCTTCCCTAGCGGGGAAACGCCCCCTAGCTGCC CTCTTCGAGGGCGTCGCCGCGGCGCTGTACTCGCCTAACCCCCTCTTGATACTGCTTGCCCCCAACGTGCTGTACCTAGC CAGCCCGGAAGCAGTCATCGCCTTGATGCCCGTAATCCTAGCCGTAGTTTATGGAAAGCTCGTCGGCACGGTTGACTTCG GAATAGCGTGGCTCAGGGCGTGGATGGGCGACGACTACTGGCCCCTCGAGAGGTTCGTCCACGACCGCGGGAGGACTAAG GAGGCCAAGGAAATAAGGGTCGGACCGCTCGTCTTCACTGATGCACACTTCGGCTTGATGAGGTACTCAATGGGCTCGGT GCTGCCTCACCTAATGGCGTTAAACGGGGCCGTGCCCCACCGCTTGTGCGGTTCGCACGAAAACAACCCGGCCTCGAGGT GGGAGGCCTACGCCTTGGTCAGGGGGCTAAAGCACGGGCGGGAGGGCAAGGCGGAGTTGACGAAGATGAAGGGGGAAGGA GTTAACGTCTACGTCTATTCGTTCGAAGGGGGGTGCGTCGCGGTAGTGGAACACCCCTCCGGCGCGGACGACTTGCCTTG CGTGGAGTGGAGGTGTGAGGTAGCTGACCCGCACAACGCCGAGGGGCCCTCGCCGTCCCCCCAGAAGCTCTTGGAGGAGC TGAGCTCTTGCGAGCCGACGGAGAGGGTAGAGTTGAAGGAACCGAAGGTCTACGAGGTCGAGTTCGAGGGGGAGGGGCTG TGCGAGCGCAAGGGCTTCTTAATAGACTGGGGACCGTTCAAACACGCGGTGGCGTTTGGGAACAACGCCGTTAATGGAAA GAACAAGTTGGAAGGGATTGACTTAATCAGCACGGTAGACGACCACAGTTGCGCGGGCTTCGGGAGGAGTACCTACGAGC CGTCCTCCTTCAAGGGCTTCAAGGTAATAAAGGGAAGAGCTGAACCGATACATATTGCAATTAATAAGGTAAAGTACGTT GCAATGGGAGAATCTATGGTTAGCAAAGAAGCTGAAGAGGTCACGGTCAAGTCAGTGAAGGTGGGGATCGCGGCGGCCGC CTCCGCAATAATGATCGCGCTGCTGGCGTGA
Upstream 100 bases:
>100_bases CTTCCTAACGGCCTTGCCCTCGTCGTTGATCTCGTAAAAGCAGTACTTAGTGCCGTCATAAGCGACAATAACCCTTGACA AGCCCTACCCCCGGAAGGCC
Downstream 100 bases:
>100_bases GCTCAGACAGCCACCGCGTCCCCATCCCTTCGGGAGTGGTCGGGATGGTCATCATCGCGCTCAAAAACGCGATTAGGGAC TCAAGGAGGAGAGCTTCTCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 436; Mature: 436
Protein sequence:
>436_residues MNTLLKYYKLLVTLPRDEVAYALAALSASALSLRDPLTLLSLIVFSILFYEERVLNGRRLAFLIALSSLASLAGKRPLAA LFEGVAAALYSPNPLLILLAPNVLYLASPEAVIALMPVILAVVYGKLVGTVDFGIAWLRAWMGDDYWPLERFVHDRGRTK EAKEIRVGPLVFTDAHFGLMRYSMGSVLPHLMALNGAVPHRLCGSHENNPASRWEAYALVRGLKHGREGKAELTKMKGEG VNVYVYSFEGGCVAVVEHPSGADDLPCVEWRCEVADPHNAEGPSPSPQKLLEELSSCEPTERVELKEPKVYEVEFEGEGL CERKGFLIDWGPFKHAVAFGNNAVNGKNKLEGIDLISTVDDHSCAGFGRSTYEPSSFKGFKVIKGRAEPIHIAINKVKYV AMGESMVSKEAEEVTVKSVKVGIAAAASAIMIALLA
Sequences:
>Translated_436_residues MNTLLKYYKLLVTLPRDEVAYALAALSASALSLRDPLTLLSLIVFSILFYEERVLNGRRLAFLIALSSLASLAGKRPLAA LFEGVAAALYSPNPLLILLAPNVLYLASPEAVIALMPVILAVVYGKLVGTVDFGIAWLRAWMGDDYWPLERFVHDRGRTK EAKEIRVGPLVFTDAHFGLMRYSMGSVLPHLMALNGAVPHRLCGSHENNPASRWEAYALVRGLKHGREGKAELTKMKGEG VNVYVYSFEGGCVAVVEHPSGADDLPCVEWRCEVADPHNAEGPSPSPQKLLEELSSCEPTERVELKEPKVYEVEFEGEGL CERKGFLIDWGPFKHAVAFGNNAVNGKNKLEGIDLISTVDDHSCAGFGRSTYEPSSFKGFKVIKGRAEPIHIAINKVKYV AMGESMVSKEAEEVTVKSVKVGIAAAASAIMIALLA >Mature_436_residues MNTLLKYYKLLVTLPRDEVAYALAALSASALSLRDPLTLLSLIVFSILFYEERVLNGRRLAFLIALSSLASLAGKRPLAA LFEGVAAALYSPNPLLILLAPNVLYLASPEAVIALMPVILAVVYGKLVGTVDFGIAWLRAWMGDDYWPLERFVHDRGRTK EAKEIRVGPLVFTDAHFGLMRYSMGSVLPHLMALNGAVPHRLCGSHENNPASRWEAYALVRGLKHGREGKAELTKMKGEG VNVYVYSFEGGCVAVVEHPSGADDLPCVEWRCEVADPHNAEGPSPSPQKLLEELSSCEPTERVELKEPKVYEVEFEGEGL CERKGFLIDWGPFKHAVAFGNNAVNGKNKLEGIDLISTVDDHSCAGFGRSTYEPSSFKGFKVIKGRAEPIHIAINKVKYV AMGESMVSKEAEEVTVKSVKVGIAAAASAIMIALLA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 47511; Mature: 47511
Theoretical pI: Translated: 6.74; Mature: 6.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNTLLKYYKLLVTLPRDEVAYALAALSASALSLRDPLTLLSLIVFSILFYEERVLNGRRL CCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCHH AFLIALSSLASLAGKRPLAALFEGVAAALYSPNPLLILLAPNVLYLASPEAVIALMPVIL HHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCEEEEECCCEEEEECCHHHHHHHHHHH AVVYGKLVGTVDFGIAWLRAWMGDDYWPLERFVHDRGRTKEAKEIRVGPLVFTDAHFGLM HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCHHEEECCEEEECCHHHHH RYSMGSVLPHLMALNGAVPHRLCGSHENNPASRWEAYALVRGLKHGREGKAELTKMKGEG HHHHHHHHHHHHHHCCCCCHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHCCCCC VNVYVYSFEGGCVAVVEHPSGADDLPCVEWRCEVADPHNAEGPSPSPQKLLEELSSCEPT EEEEEEEECCCEEEEEECCCCCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHCCCCC ERVELKEPKVYEVEFEGEGLCERKGFLIDWGPFKHAVAFGNNAVNGKNKLEGIDLISTVD CCCCCCCCEEEEEEECCCCCCCCCCEEEECCCHHHHHHCCCCCCCCCCCCCCCHHEECCC DHSCAGFGRSTYEPSSFKGFKVIKGRAEPIHIAINKVKYVAMGESMVSKEAEEVTVKSVK CCCCCCCCCCCCCCCCCCCEEEEECCCCEEEEEEEEEEEEEECHHHHHHHHHHHHHHHHH VGIAAAASAIMIALLA HHHHHHHHHHHHHHCC >Mature Secondary Structure MNTLLKYYKLLVTLPRDEVAYALAALSASALSLRDPLTLLSLIVFSILFYEERVLNGRRL CCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCHH AFLIALSSLASLAGKRPLAALFEGVAAALYSPNPLLILLAPNVLYLASPEAVIALMPVIL HHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCEEEEECCCEEEEECCHHHHHHHHHHH AVVYGKLVGTVDFGIAWLRAWMGDDYWPLERFVHDRGRTKEAKEIRVGPLVFTDAHFGLM HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCHHEEECCEEEECCHHHHH RYSMGSVLPHLMALNGAVPHRLCGSHENNPASRWEAYALVRGLKHGREGKAELTKMKGEG HHHHHHHHHHHHHHCCCCCHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHCCCCC VNVYVYSFEGGCVAVVEHPSGADDLPCVEWRCEVADPHNAEGPSPSPQKLLEELSSCEPT EEEEEEEECCCEEEEEECCCCCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHCCCCC ERVELKEPKVYEVEFEGEGLCERKGFLIDWGPFKHAVAFGNNAVNGKNKLEGIDLISTVD CCCCCCCCEEEEEEECCCCCCCCCCEEEECCCHHHHHHCCCCCCCCCCCCCCCHHEECCC DHSCAGFGRSTYEPSSFKGFKVIKGRAEPIHIAINKVKYVAMGESMVSKEAEEVTVKSVK CCCCCCCCCCCCCCCCCCCEEEEECCCCEEEEEEEEEEEEEECHHHHHHHHHHHHHHHHH VGIAAAASAIMIALLA HHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA