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The map label for this gene is yciH [C]

Identifier: 156938068

GI number: 156938068

Start: 1139160

End: 1139474

Strand: Reverse

Name: yciH [C]

Synonym: Igni_1281

Alternate gene names: 156938068

Gene position: 1139474-1139160 (Counterclockwise)

Preceding gene: 156938074

Following gene: 156938067

Centisome position: 87.82

GC content: 52.38

Gene sequence:

>315_bases
ATGGGGACGTTGGACCCCTCGGTGTGCGGAGGTCTCCCTCCGGAGGTCTGTGAACAGCTAATGATGGATCAACAAGAGCT
GATAAAGATAAAGCTGGAAAAGAGGAAGTGGGGCAGAGAAGTGACCATAATCGAAGGCCTCAACTTAGACAACGAGAGGT
TGAAGAAGGTGGCTAAACAACTCAAGAGCAAGCTGGCCACCGGAGGGACCGTAAAGAACGGGAGGATAGAACTTCAAGGG
GACCACAGGGACAGGGTGAAGAAGCTGCTCGAGGAGATGGGATACCCTCCCGAAAACATAGTCATCGTCGGTTAG

Upstream 100 bases:

>100_bases
AACACGTCTTTGACCGGCGAGGCGTCCACCTTAACCCCCCGGTACACCGTAGGTAACTCTTTATAAACTAAAGTTCAAGG
CTACTCCCGATGGGCTGAAC

Downstream 100 bases:

>100_bases
AGGCCCCTTTTTTAAAGGTCAAAGTGTGGAGAACCCCTTATATCCCCACAGCATCGCTCCCCGGGGTCGCGTAGAATGGC
AAAGGCCGTCTGGGTGCACG

Product: translation initiation factor Sui1

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 104; Mature: 103

Protein sequence:

>104_residues
MGTLDPSVCGGLPPEVCEQLMMDQQELIKIKLEKRKWGREVTIIEGLNLDNERLKKVAKQLKSKLATGGTVKNGRIELQG
DHRDRVKKLLEEMGYPPENIVIVG

Sequences:

>Translated_104_residues
MGTLDPSVCGGLPPEVCEQLMMDQQELIKIKLEKRKWGREVTIIEGLNLDNERLKKVAKQLKSKLATGGTVKNGRIELQG
DHRDRVKKLLEEMGYPPENIVIVG
>Mature_103_residues
GTLDPSVCGGLPPEVCEQLMMDQQELIKIKLEKRKWGREVTIIEGLNLDNERLKKVAKQLKSKLATGGTVKNGRIELQGD
HRDRVKKLLEEMGYPPENIVIVG

Specific function: Unknown

COG id: COG0023

COG function: function code J; Translation initiation factor 1 (eIF-1/SUI1) and related proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the SUI1 family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): SUI1_IGNH4 (A8AC05)

Other databases:

- EMBL:   CP000816
- RefSeq:   YP_001435864.1
- ProteinModelPortal:   A8AC05
- SMR:   A8AC05
- STRING:   A8AC05
- GeneID:   5562940
- GenomeReviews:   CP000816_GR
- KEGG:   iho:Igni_1281
- eggNOG:   arNOG11909
- HOGENOM:   HBG706849
- OMA:   MPEICPR
- ProtClustDB:   PRK00939
- BioCyc:   IHOS453591:IGNI_1281-MONOMER
- HAMAP:   MF_00604
- InterPro:   IPR022851
- InterPro:   IPR005872
- InterPro:   IPR001950
- PIRSF:   PIRSF037511
- TIGRFAMs:   TIGR01158

Pfam domain/function: PF01253 SUI1; SSF55159 TIF_SUI1

EC number: NA

Molecular weight: Translated: 11694; Mature: 11563

Theoretical pI: Translated: 8.75; Mature: 8.75

Prosite motif: PS50296 SUI1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGTLDPSVCGGLPPEVCEQLMMDQQELIKIKLEKRKWGREVTIIEGLNLDNERLKKVAKQ
CCCCCCHHHCCCCHHHHHHHHHCHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHH
LKSKLATGGTVKNGRIELQGDHRDRVKKLLEEMGYPPENIVIVG
HHHHHHCCCCCCCCEEEEECCCHHHHHHHHHHCCCCCCCEEEEC
>Mature Secondary Structure 
GTLDPSVCGGLPPEVCEQLMMDQQELIKIKLEKRKWGREVTIIEGLNLDNERLKKVAKQ
CCCCCHHHCCCCHHHHHHHHHCHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHH
LKSKLATGGTVKNGRIELQGDHRDRVKKLLEEMGYPPENIVIVG
HHHHHHCCCCCCCCEEEEECCCHHHHHHHHHHCCCCCCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA