Click here to switch to the map view.

The map label for this gene is rpl32e [H]

Identifier: 156938066

GI number: 156938066

Start: 1138078

End: 1138524

Strand: Reverse

Name: rpl32e [H]

Synonym: Igni_1279

Alternate gene names: 156938066

Gene position: 1138524-1138078 (Counterclockwise)

Preceding gene: 156938067

Following gene: 156938065

Centisome position: 87.74

GC content: 54.14

Gene sequence:

>447_bases
ATGTCCAATGAGCTGAGAGAAGCCCTCAACAAGAGGGCTCAAGTTCTGAAGGAGATAAGGAAGAAAAGGAAGGCTATGAA
GAAGGCAGTAGAGCTTAGAAACGACTTGCCGGAGTTCATCCGATACCACTGGTGGAGGTACTTCCGGCTGGAGAGGGGCT
ACAAGTGGAGGAAGCCCAAGGGCAACGACAACAAGTCCCGGTTGCAGCTCAAGGGCTATCCTCCAATAGTCAAGGTAGGG
TACCGCACCCCGAAGGAGGTTAGGGGGCTCCACCCCAGCGGCCTGGAGCCGGTCATAGTTCACAACGTGAAGGAGCTTGA
GAAGGTCGACAAGGAGAAACACATAGTTTACATAGCTTCATCCGTAGGGAAGAAGAAGAGGGCCGAAATAATTAGGAGGG
CTCAAGAACTGGGCGTCCGCGTGGCCAACGGGGGTGTAGAGGCGTGA

Upstream 100 bases:

>100_bases
AGACTGCCGCCAACATAGAGCAAGCTACTAAAATAACCGAGTTTGACCGCAGGGTGTTCATGGACGGTATCTACATATAC
GCCAGGGAGGTGATGTCGTA

Downstream 100 bases:

>100_bases
GGCCAGACAAGGTCGCGAGGTTAGCGGCAGAGATCCTCGGCGTCGGGGAGAGTAGGATCTGGATAGACCCCACAAGGCTG
GCCGACGTCTCCGAGGCCGT

Product: 50S ribosomal protein L32e

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 148; Mature: 147

Protein sequence:

>148_residues
MSNELREALNKRAQVLKEIRKKRKAMKKAVELRNDLPEFIRYHWWRYFRLERGYKWRKPKGNDNKSRLQLKGYPPIVKVG
YRTPKEVRGLHPSGLEPVIVHNVKELEKVDKEKHIVYIASSVGKKKRAEIIRRAQELGVRVANGGVEA

Sequences:

>Translated_148_residues
MSNELREALNKRAQVLKEIRKKRKAMKKAVELRNDLPEFIRYHWWRYFRLERGYKWRKPKGNDNKSRLQLKGYPPIVKVG
YRTPKEVRGLHPSGLEPVIVHNVKELEKVDKEKHIVYIASSVGKKKRAEIIRRAQELGVRVANGGVEA
>Mature_147_residues
SNELREALNKRAQVLKEIRKKRKAMKKAVELRNDLPEFIRYHWWRYFRLERGYKWRKPKGNDNKSRLQLKGYPPIVKVGY
RTPKEVRGLHPSGLEPVIVHNVKELEKVDKEKHIVYIASSVGKKKRAEIIRRAQELGVRVANGGVEA

Specific function: Unknown

COG id: COG1717

COG function: function code J; Ribosomal protein L32E

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein L32e family [H]

Homologues:

Organism=Homo sapiens, GI4506635, Length=108, Percent_Identity=38.8888888888889, Blast_Score=76, Evalue=9e-15,
Organism=Homo sapiens, GI55743130, Length=108, Percent_Identity=38.8888888888889, Blast_Score=76, Evalue=9e-15,
Organism=Homo sapiens, GI55743128, Length=108, Percent_Identity=38.8888888888889, Blast_Score=76, Evalue=9e-15,
Organism=Saccharomyces cerevisiae, GI6319378, Length=108, Percent_Identity=36.1111111111111, Blast_Score=63, Evalue=2e-11,
Organism=Drosophila melanogaster, GI24651273, Length=107, Percent_Identity=42.0560747663551, Blast_Score=79, Evalue=8e-16,
Organism=Drosophila melanogaster, GI221460572, Length=108, Percent_Identity=41.6666666666667, Blast_Score=79, Evalue=1e-15,
Organism=Drosophila melanogaster, GI221460569, Length=108, Percent_Identity=41.6666666666667, Blast_Score=79, Evalue=1e-15,
Organism=Drosophila melanogaster, GI17864106, Length=108, Percent_Identity=41.6666666666667, Blast_Score=79, Evalue=1e-15,
Organism=Drosophila melanogaster, GI24651276, Length=108, Percent_Identity=41.6666666666667, Blast_Score=79, Evalue=1e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001515
- InterPro:   IPR018263
- ProDom:   PD003823 [H]

Pfam domain/function: PF01655 Ribosomal_L32e [H]

EC number: NA

Molecular weight: Translated: 17422; Mature: 17291

Theoretical pI: Translated: 11.09; Mature: 11.09

Prosite motif: PS00580 RIBOSOMAL_L32E

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
0.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNELREALNKRAQVLKEIRKKRKAMKKAVELRNDLPEFIRYHWWRYFRLERGYKWRKPK
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
GNDNKSRLQLKGYPPIVKVGYRTPKEVRGLHPSGLEPVIVHNVKELEKVDKEKHIVYIAS
CCCCCCEEEECCCCCEEEECCCCCHHHCCCCCCCCCHHHHHHHHHHHHHCCHHEEEEEHH
SVGKKKRAEIIRRAQELGVRVANGGVEA
HCCCHHHHHHHHHHHHCCEEECCCCCCC
>Mature Secondary Structure 
SNELREALNKRAQVLKEIRKKRKAMKKAVELRNDLPEFIRYHWWRYFRLERGYKWRKPK
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
GNDNKSRLQLKGYPPIVKVGYRTPKEVRGLHPSGLEPVIVHNVKELEKVDKEKHIVYIAS
CCCCCCEEEECCCCCEEEECCCCCHHHCCCCCCCCCHHHHHHHHHHHHHCCHHEEEEEHH
SVGKKKRAEIIRRAQELGVRVANGGVEA
HCCCHHHHHHHHHHHHCCEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10382966 [H]