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The map label for this gene is rpl19e [H]

Identifier: 156938065

GI number: 156938065

Start: 1137629

End: 1138081

Strand: Reverse

Name: rpl19e [H]

Synonym: Igni_1278

Alternate gene names: 156938065

Gene position: 1138081-1137629 (Counterclockwise)

Preceding gene: 156938066

Following gene: 156938064

Centisome position: 87.71

GC content: 55.41

Gene sequence:

>453_bases
GTGAGGCCAGACAAGGTCGCGAGGTTAGCGGCAGAGATCCTCGGCGTCGGGGAGAGTAGGATCTGGATAGACCCCACAAG
GCTGGCCGACGTCTCCGAGGCCGTCTCCAAGGAGGACGTAAGGCGCCTAATAGAGGAAGGAGCAATCAAGGTCGAGCCCA
AGAGGCGTAACAGCAGGGCAAGGTGGAAGGTACGCCACGAGCAGAGGAAGAAGGGGAGGAGGAGGGGTTACGGCAAGAGG
AAGGGCAAGGCCAGCGCCCGTCAGGACCCCAAGGAAGCTTGGATGAACAGGATAAGGAAGATAAGGAGGTTCTTGAGGTA
CTTGAGGGACCACGAGGTAATAGACAGGAGGACTTACAGAGAGCTATACATGAAGGCTAAAGGTGGCATGTTCGATAGCT
TAAGTAACTTAAAGACCTACTTGAGGGAGAGGTACGGCATAGAGGTGAAGTGA

Upstream 100 bases:

>100_bases
TAGTTTACATAGCTTCATCCGTAGGGAAGAAGAAGAGGGCCGAAATAATTAGGAGGGCTCAAGAACTGGGCGTCCGCGTG
GCCAACGGGGGTGTAGAGGC

Downstream 100 bases:

>100_bases
GTTGGCAAGGGGGCCTAGGTACAAAGTTCCCAGAAGGAGGAGAAGGGAAGGGAAGACCAACTACTACAAGCGTTACACCA
TGGCGCTCTCGAGGAAGCCC

Product: 50S ribosomal protein L19e

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 150; Mature: 150

Protein sequence:

>150_residues
MRPDKVARLAAEILGVGESRIWIDPTRLADVSEAVSKEDVRRLIEEGAIKVEPKRRNSRARWKVRHEQRKKGRRRGYGKR
KGKASARQDPKEAWMNRIRKIRRFLRYLRDHEVIDRRTYRELYMKAKGGMFDSLSNLKTYLRERYGIEVK

Sequences:

>Translated_150_residues
MRPDKVARLAAEILGVGESRIWIDPTRLADVSEAVSKEDVRRLIEEGAIKVEPKRRNSRARWKVRHEQRKKGRRRGYGKR
KGKASARQDPKEAWMNRIRKIRRFLRYLRDHEVIDRRTYRELYMKAKGGMFDSLSNLKTYLRERYGIEVK
>Mature_150_residues
MRPDKVARLAAEILGVGESRIWIDPTRLADVSEAVSKEDVRRLIEEGAIKVEPKRRNSRARWKVRHEQRKKGRRRGYGKR
KGKASARQDPKEAWMNRIRKIRRFLRYLRDHEVIDRRTYRELYMKAKGGMFDSLSNLKTYLRERYGIEVK

Specific function: Unknown

COG id: COG2147

COG function: function code J; Ribosomal protein L19E

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein L19e family [H]

Homologues:

Organism=Homo sapiens, GI4506609, Length=126, Percent_Identity=42.0634920634921, Blast_Score=89, Evalue=2e-18,
Organism=Caenorhabditis elegans, GI17508673, Length=119, Percent_Identity=42.0168067226891, Blast_Score=100, Evalue=5e-22,
Organism=Saccharomyces cerevisiae, GI6319559, Length=124, Percent_Identity=36.2903225806452, Blast_Score=80, Evalue=1e-16,
Organism=Saccharomyces cerevisiae, GI6319444, Length=124, Percent_Identity=36.2903225806452, Blast_Score=80, Evalue=1e-16,
Organism=Drosophila melanogaster, GI45552831, Length=137, Percent_Identity=40.8759124087591, Blast_Score=111, Evalue=2e-25,
Organism=Drosophila melanogaster, GI17136322, Length=137, Percent_Identity=40.8759124087591, Blast_Score=111, Evalue=2e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000196
- InterPro:   IPR015972
- InterPro:   IPR015973
- InterPro:   IPR015974 [H]

Pfam domain/function: PF01280 Ribosomal_L19e [H]

EC number: NA

Molecular weight: Translated: 17967; Mature: 17967

Theoretical pI: Translated: 11.53; Mature: 11.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRPDKVARLAAEILGVGESRIWIDPTRLADVSEAVSKEDVRRLIEEGAIKVEPKRRNSRA
CCHHHHHHHHHHHHCCCCCCEEECHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCHH
RWKVRHEQRKKGRRRGYGKRKGKASARQDPKEAWMNRIRKIRRFLRYLRDHEVIDRRTYR
HHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ELYMKAKGGMFDSLSNLKTYLRERYGIEVK
HHHHHHCCCCHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MRPDKVARLAAEILGVGESRIWIDPTRLADVSEAVSKEDVRRLIEEGAIKVEPKRRNSRA
CCHHHHHHHHHHHHCCCCCCEEECHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCHH
RWKVRHEQRKKGRRRGYGKRKGKASARQDPKEAWMNRIRKIRRFLRYLRDHEVIDRRTYR
HHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ELYMKAKGGMFDSLSNLKTYLRERYGIEVK
HHHHHHCCCCHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12622808 [H]