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The map label for this gene is 156938038

Identifier: 156938038

GI number: 156938038

Start: 1110776

End: 1111843

Strand: Direct

Name: 156938038

Synonym: Igni_1251

Alternate gene names: NA

Gene position: 1110776-1111843 (Clockwise)

Preceding gene: 156938036

Following gene: 156938042

Centisome position: 85.61

GC content: 60.58

Gene sequence:

>1068_bases
GTGGAGTACAAGGGGGCGAAGTACATACACCTCAAGAAGGGTAAGTGGGGCGGCAAGGGCTCAGTAATCATCTACTACAA
GGGGGACGTGGGCGTAGTGCCGGGCTACCCTTCGATACAGAGGCTCGTGCTTCTCTCCAAGGTCCCCCATTACTTCCCAG
AGGGGGTTTCCGTGGAGGAAAAGATGAACGGGTACAACGTCAGGGTAGTCAAGGTCGGCGGAGAGGTCTTCGCCGTAACG
AGGGGAGGTTACCTCTGCCCCTACACCAACGCGAGGCTCAAGAGCGTGTACGGGGAGGAGTTGAGCTCGCTGTTGGACGA
GCTCCCGCCCGGGAGCTTCGTGGCCGGCGAGGTGGTGGGGACGGAGAACCCCTACGTAAGGGTAGAGTATCCAGAGGCGC
CGAAGTTCGACTACTTCATCTTCGACATCTTCGTGAGGGAGGGAGACGGGTGGAGGCAGATGCCGGTCGAGGAGAGGCAC
GAGCTGGTGAGGAGGCACGGGCTCCGGGGGGTTAGGCTGTTGGGGACCTTCCGGCCCGACGAGTCTGTGAGCAAGATAAA
GGAGATCGTCGACCGCTTCGACGCCGAGGGGAGGGAAGGGGTGGTGCTGAAGGACCCCTTGTACAAGAGGCCCCCCGCGA
AGTACACGGGCTCCTTCACCAACATAGGGGACATAGAGCAAGGCATGAAGTACCCGTTCGACGAAGGGAAGGACTACTTA
TTCCCCAGGATAGTTAGGGAGATGTTCAAGGTGTTTGAAGAGGGACTGGCCGGGCGGAAGCTGGAGGAGAGGGCCCTCTG
GCTTGGGCGCGCCATCTTGGCGCCGGCCGTCGAGGCGGTCAAGGCCGTCGCCGAGGGGAGGCCCCTCCACGAGGACTTCG
TCCTGCGCTTCCCCACGGAGGGGGACCTAGAGGACTACTTGGACTACGTTAGGCAGTTGGGGGTGAAGGTAACCGTGTTA
GAAAAGTGGGAGGAGGGAGGCTGGGTCGTAGTTAAGGTAAGGAAGTTTAAGCGGAGCCCGGACGTTATAGAGTCCATGTT
GAGGACCGGGAGGACCCCGCTAGACTAG

Upstream 100 bases:

>100_bases
CCTTCAAATACCGCCCCCCGCTTACCTACCGGTAAGCAAGGTTATTGAGCGCGGCCCCTATTCAACAGAGCCGCCGGGGG
CGGGGCTTTAGGGTAGCGGC

Downstream 100 bases:

>100_bases
GCGGGAGGTCATGCCGTTCTCCAAGAGGTCCTCGAAGTCGTCCACCGAGGCCACTTCTTTCCCATTCAAGAGCACCCTCA
GCGGGCCCCCGCCCACCTTA

Product: ATP dependent DNA ligase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 355; Mature: 355

Protein sequence:

>355_residues
MEYKGAKYIHLKKGKWGGKGSVIIYYKGDVGVVPGYPSIQRLVLLSKVPHYFPEGVSVEEKMNGYNVRVVKVGGEVFAVT
RGGYLCPYTNARLKSVYGEELSSLLDELPPGSFVAGEVVGTENPYVRVEYPEAPKFDYFIFDIFVREGDGWRQMPVEERH
ELVRRHGLRGVRLLGTFRPDESVSKIKEIVDRFDAEGREGVVLKDPLYKRPPAKYTGSFTNIGDIEQGMKYPFDEGKDYL
FPRIVREMFKVFEEGLAGRKLEERALWLGRAILAPAVEAVKAVAEGRPLHEDFVLRFPTEGDLEDYLDYVRQLGVKVTVL
EKWEEGGWVVVKVRKFKRSPDVIESMLRTGRTPLD

Sequences:

>Translated_355_residues
MEYKGAKYIHLKKGKWGGKGSVIIYYKGDVGVVPGYPSIQRLVLLSKVPHYFPEGVSVEEKMNGYNVRVVKVGGEVFAVT
RGGYLCPYTNARLKSVYGEELSSLLDELPPGSFVAGEVVGTENPYVRVEYPEAPKFDYFIFDIFVREGDGWRQMPVEERH
ELVRRHGLRGVRLLGTFRPDESVSKIKEIVDRFDAEGREGVVLKDPLYKRPPAKYTGSFTNIGDIEQGMKYPFDEGKDYL
FPRIVREMFKVFEEGLAGRKLEERALWLGRAILAPAVEAVKAVAEGRPLHEDFVLRFPTEGDLEDYLDYVRQLGVKVTVL
EKWEEGGWVVVKVRKFKRSPDVIESMLRTGRTPLD
>Mature_355_residues
MEYKGAKYIHLKKGKWGGKGSVIIYYKGDVGVVPGYPSIQRLVLLSKVPHYFPEGVSVEEKMNGYNVRVVKVGGEVFAVT
RGGYLCPYTNARLKSVYGEELSSLLDELPPGSFVAGEVVGTENPYVRVEYPEAPKFDYFIFDIFVREGDGWRQMPVEERH
ELVRRHGLRGVRLLGTFRPDESVSKIKEIVDRFDAEGREGVVLKDPLYKRPPAKYTGSFTNIGDIEQGMKYPFDEGKDYL
FPRIVREMFKVFEEGLAGRKLEERALWLGRAILAPAVEAVKAVAEGRPLHEDFVLRFPTEGDLEDYLDYVRQLGVKVTVL
EKWEEGGWVVVKVRKFKRSPDVIESMLRTGRTPLD

Specific function: Unknown

COG id: COG1423

COG function: function code L; ATP-dependent DNA ligase, homolog of eukaryotic ligase III

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012310
- InterPro:   IPR001072 [H]

Pfam domain/function: PF01068 DNA_ligase_A_M [H]

EC number: NA

Molecular weight: Translated: 40407; Mature: 40407

Theoretical pI: Translated: 8.29; Mature: 8.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEYKGAKYIHLKKGKWGGKGSVIIYYKGDVGVVPGYPSIQRLVLLSKVPHYFPEGVSVEE
CCCCCCEEEEEECCCCCCCCCEEEEECCCEECCCCCHHHHHHHHHHHCCHHCCCCCCHHH
KMNGYNVRVVKVGGEVFAVTRGGYLCPYTNARLKSVYGEELSSLLDELPPGSFVAGEVVG
HCCCCEEEEEEECCEEEEEECCCEECCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEEC
TENPYVRVEYPEAPKFDYFIFDIFVREGDGWRQMPVEERHELVRRHGLRGVRLLGTFRPD
CCCCEEEEECCCCCCCCEEEEEEEEECCCCCCCCCHHHHHHHHHHCCCCCEEEEEECCCC
ESVSKIKEIVDRFDAEGREGVVLKDPLYKRPPAKYTGSFTNIGDIEQGMKYPFDEGKDYL
HHHHHHHHHHHHHCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCH
FPRIVREMFKVFEEGLAGRKLEERALWLGRAILAPAVEAVKAVAEGRPLHEDFVLRFPTE
HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCC
GDLEDYLDYVRQLGVKVTVLEKWEEGGWVVVKVRKFKRSPDVIESMLRTGRTPLD
CCHHHHHHHHHHCCCEEEEEEEECCCCEEEEEEECCCCCHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MEYKGAKYIHLKKGKWGGKGSVIIYYKGDVGVVPGYPSIQRLVLLSKVPHYFPEGVSVEE
CCCCCCEEEEEECCCCCCCCCEEEEECCCEECCCCCHHHHHHHHHHHCCHHCCCCCCHHH
KMNGYNVRVVKVGGEVFAVTRGGYLCPYTNARLKSVYGEELSSLLDELPPGSFVAGEVVG
HCCCCEEEEEEECCEEEEEECCCEECCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEEC
TENPYVRVEYPEAPKFDYFIFDIFVREGDGWRQMPVEERHELVRRHGLRGVRLLGTFRPD
CCCCEEEEECCCCCCCCEEEEEEEEECCCCCCCCCHHHHHHHHHHCCCCCEEEEEECCCC
ESVSKIKEIVDRFDAEGREGVVLKDPLYKRPPAKYTGSFTNIGDIEQGMKYPFDEGKDYL
HHHHHHHHHHHHHCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCH
FPRIVREMFKVFEEGLAGRKLEERALWLGRAILAPAVEAVKAVAEGRPLHEDFVLRFPTE
HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCC
GDLEDYLDYVRQLGVKVTVLEKWEEGGWVVVKVRKFKRSPDVIESMLRTGRTPLD
CCHHHHHHHHHHCCCEEEEEEEECCCCEEEEEEECCCCCHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]