Click here to switch to the map view.

The map label for this gene is korB [H]

Identifier: 156937865

GI number: 156937865

Start: 959679

End: 960545

Strand: Reverse

Name: korB [H]

Synonym: Igni_1077

Alternate gene names: 156937865

Gene position: 960545-959679 (Counterclockwise)

Preceding gene: 156937866

Following gene: 156937864

Centisome position: 74.03

GC content: 60.32

Gene sequence:

>867_bases
ATGAGCTTGGAGGAGGCGAGGAGGAAGCTTAGGCGAATGCCCCAGATGGCCTTGGCCAGGGCGGAGGCCCTCCCCCACAG
CCTCTGCCCCGGCTGCGGGATAGGGACGATACTGAACACGTTCTTGAGGGCCATGGACGAGCTCGTGCAAGAGGGCAAGC
TCGACCCCGACAAGCTGGTGGTGGTCAGCGGCATAGGCTGCTCCGGGAGGATAAGCGGGTTCATCAAAGTCGACTCCATG
CACACCACCCACGGGAGGCCAGTGGCCTTCGCCACCGGGATAAAGCTGGCCAAGCCGGAGCTGAACGTCTGGGTGTTCGG
CGGCGATGCCGACTTGTTCCAGATAGGCTTGAACCACACCCTTCAAGCGGCCAGGAGGAACATAGACATAAACGTCGTCA
TGGTGAACAACTTCAACATAGCGATGACCGGAGGCGTGCCCACCGTGACCACCCCGCCGGGCTCGGTGACTAAGTACTCC
CCCAAGGGGTGGCTGGAGAGGCCCTTCAACGTGCCAAAGCTGGTGGCCTCCGCCGGGGCCACTTGGGTAGCGCGCTGGAC
CACAGCCCACCCGTTCCAACTGAAGAACGCGTTCAAAGAGATGGCGCTTAGGAAGGGCTTCAACTTCTTGGAGGTGGTCT
CCCAGTGCCCGGTGCTCTACGGGAGGTACAACAAGTTCAGGGACCCGTACAGCATGGTCGAGTACTTCATGAAGATGAGT
AAGCCCGTCAAGAAGCCCAACGACCCGCAAACCTTGGAGGAGGCCAGCATAGAGTTCGGCAAGCCCATTTTAGTGGGCAA
GTTCGTGGAGAGGGAGGCGCCCGAGTACGTGGAGACCTTGTACCAGATGTTGGGGGTGAGAAAGTGA

Upstream 100 bases:

>100_bases
TCTTAAAGGTCGTCCCCGAGGAGAAGGTTTCGTTCGTGTACAGGATAGGCGAGATCCCCATCCCGCCCGAACAGATCTTG
GAGGAGGGGGGTGTCAGGAT

Downstream 100 bases:

>100_bases
TCCAAGACGTGAGGATAACCGGGATAGGCGGCCAAGGGATACTGACCATGGGGAAGATACTGGGAACCGCGCTGGTGAGG
GAAGGCAAGTACGCCACCTT

Product: 2-oxoglutarate ferredoxin oxidoreductase, beta subunit

Products: NA

Alternate protein names: 2-ketoglutarate oxidoreductase beta chain; KOR; 2-oxoglutarate-ferredoxin oxidoreductase subunit beta [H]

Number of amino acids: Translated: 288; Mature: 287

Protein sequence:

>288_residues
MSLEEARRKLRRMPQMALARAEALPHSLCPGCGIGTILNTFLRAMDELVQEGKLDPDKLVVVSGIGCSGRISGFIKVDSM
HTTHGRPVAFATGIKLAKPELNVWVFGGDADLFQIGLNHTLQAARRNIDINVVMVNNFNIAMTGGVPTVTTPPGSVTKYS
PKGWLERPFNVPKLVASAGATWVARWTTAHPFQLKNAFKEMALRKGFNFLEVVSQCPVLYGRYNKFRDPYSMVEYFMKMS
KPVKKPNDPQTLEEASIEFGKPILVGKFVEREAPEYVETLYQMLGVRK

Sequences:

>Translated_288_residues
MSLEEARRKLRRMPQMALARAEALPHSLCPGCGIGTILNTFLRAMDELVQEGKLDPDKLVVVSGIGCSGRISGFIKVDSM
HTTHGRPVAFATGIKLAKPELNVWVFGGDADLFQIGLNHTLQAARRNIDINVVMVNNFNIAMTGGVPTVTTPPGSVTKYS
PKGWLERPFNVPKLVASAGATWVARWTTAHPFQLKNAFKEMALRKGFNFLEVVSQCPVLYGRYNKFRDPYSMVEYFMKMS
KPVKKPNDPQTLEEASIEFGKPILVGKFVEREAPEYVETLYQMLGVRK
>Mature_287_residues
SLEEARRKLRRMPQMALARAEALPHSLCPGCGIGTILNTFLRAMDELVQEGKLDPDKLVVVSGIGCSGRISGFIKVDSMH
TTHGRPVAFATGIKLAKPELNVWVFGGDADLFQIGLNHTLQAARRNIDINVVMVNNFNIAMTGGVPTVTTPPGSVTKYSP
KGWLERPFNVPKLVASAGATWVARWTTAHPFQLKNAFKEMALRKGFNFLEVVSQCPVLYGRYNKFRDPYSMVEYFMKMSK
PVKKPNDPQTLEEASIEFGKPILVGKFVEREAPEYVETLYQMLGVRK

Specific function: Unknown

COG id: COG1013

COG function: function code C; Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, beta subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011766 [H]

Pfam domain/function: PF02775 TPP_enzyme_C [H]

EC number: =1.2.7.3 [H]

Molecular weight: Translated: 32076; Mature: 31945

Theoretical pI: Translated: 10.03; Mature: 10.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLEEARRKLRRMPQMALARAEALPHSLCPGCGIGTILNTFLRAMDELVQEGKLDPDKLV
CCHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEE
VVSGIGCSGRISGFIKVDSMHTTHGRPVAFATGIKLAKPELNVWVFGGDADLFQIGLNHT
EEECCCCCCCCCEEEEECCEECCCCCCEEEECCCEEECCCEEEEEEECCCCEEHHHHHHH
LQAARRNIDINVVMVNNFNIAMTGGVPTVTTPPGSVTKYSPKGWLERPFNVPKLVASAGA
HHHHHCCCCEEEEEEECCEEEEECCCCEEECCCCCCCEECCCCCCCCCCCCHHHHHHCCC
TWVARWTTAHPFQLKNAFKEMALRKGFNFLEVVSQCPVLYGRYNKFRDPYSMVEYFMKMS
CEEEECCCCCCHHHHHHHHHHHHHHCCCHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHH
KPVKKPNDPQTLEEASIEFGKPILVGKFVEREAPEYVETLYQMLGVRK
CCCCCCCCCHHHHHHHHHCCCCCEEHHHHHHCCHHHHHHHHHHHCCCC
>Mature Secondary Structure 
SLEEARRKLRRMPQMALARAEALPHSLCPGCGIGTILNTFLRAMDELVQEGKLDPDKLV
CHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEE
VVSGIGCSGRISGFIKVDSMHTTHGRPVAFATGIKLAKPELNVWVFGGDADLFQIGLNHT
EEECCCCCCCCCEEEEECCEECCCCCCEEEECCCEEECCCEEEEEEECCCCEEHHHHHHH
LQAARRNIDINVVMVNNFNIAMTGGVPTVTTPPGSVTKYSPKGWLERPFNVPKLVASAGA
HHHHHCCCCEEEEEEECCEEEEECCCCEEECCCCCCCEECCCCCCCCCCCCHHHHHHCCC
TWVARWTTAHPFQLKNAFKEMALRKGFNFLEVVSQCPVLYGRYNKFRDPYSMVEYFMKMS
CEEEECCCCCCHHHHHHHHHHHHHHCCCHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHH
KPVKKPNDPQTLEEASIEFGKPILVGKFVEREAPEYVETLYQMLGVRK
CCCCCCCCCHHHHHHHHHCCCCCEEHHHHHHCCHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]