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The map label for this gene is yhbZ [C]

Identifier: 156937836

GI number: 156937836

Start: 933495

End: 934520

Strand: Reverse

Name: yhbZ [C]

Synonym: Igni_1047

Alternate gene names: 156937836

Gene position: 934520-933495 (Counterclockwise)

Preceding gene: 156937841

Following gene: 156937835

Centisome position: 72.02

GC content: 57.6

Gene sequence:

>1026_bases
GTGCTTAAGGACCCTCCCAACTACTTCAGACACCTCCACGTGCCGACGGCGGACGAGATAGTGAAGAAGGTACTCAAGAG
GTATCCCGAGCTCAAGCCGAAGAGCAAGAGGCCCAAGCACATAATAGAGCTCGAAATAAACAGAGTGAACTTGACTTACC
AAATAATAATAGACAAGCTCTCCTTCTTAGACAAGCTCCCCAAGCCGGAAAGCATGCACCCCTTCTACTTGGAGCTGGCC
TCCTTGACGGTGCCCTACCAGAAGTACTGGGCGGCGGCCTCGGGTCTGAAGAGGCTTAGGGAGAAGCTCAAGGAGATGTG
GGAGGACTACCGGGCGCTGGTGAGGGCGGCGGTGAGCTTGGAGGAGGCGGCGAGGTTCAGGAGGGAGGCCGTGGGGAGGG
CCTTAAGCATGGTAAGGAGGTCGAGGGGGGCCCTTAGCACCATAAGGGAGTTCAAGTACGCGGTGGCCTCCTTGCCCTCG
GTGGACTTCGAGGAGCCGAGGATTGTGGTGGCGGGGATGCCCTCCTCCGGGAAGTCGAGCTTCGTGAAGGCCGTTTCTAC
CGCCGAGGTGGAAGTCGCTTCCTACCCCTTCACGACCAAGCAGGTCCACTTGGGTCACTTCGAGAGAGGAGGGAGGAGGT
TCCAAGTGGTGGACACCCCGGGAATATTGGATAGACCTTGGGACTCCTTGAATGAGATAGAGAGGAAGGCCGTAATAGCT
ATAAGGCACTTACCCAACGTTTTGCTATTCTTGTACGACGTAAGCGAGGAGGGGTACGGGGTGGAGGAGCAGACGGAGGT
GCTGGACAACGTGATAAACGTGGTCGGTAAGGAGAAAGTTGTAGTGGCGCTGAACAAGATCGACGTGGCGAACGAGAGGA
AGGTCGAGCTGGCGGAAGAGGAGGCTTCCCGCAGGGGGCTGAGGACCTTCAAGCTTTCCTTGAAAACCGGCGAGGGCTTG
GAAGAGCTCTTGGAGGAGCTCGTCAGGAGGGCCGAGGAGGACTTGTCGGCCGCCCCAAAGCCTTAA

Upstream 100 bases:

>100_bases
GGACTGCAAGAGGTAGGAGAGCAACGAGGCCGCCAGGGGCGGGACGAAGAGCTTCTCCCACATATCTTAACCTCCCTCGG
CGAGGGCGGAGGGGGTAGAA

Downstream 100 bases:

>100_bases
CCGCCCCCGCGCCCCTCGTGAGAGGGGAGCGTGCAAGAGGGCTACAGCGTCCTCTTTAGGGACGGCGTAGTGGTCGAGGA
GCCCGGAAAGAGCTACGTGG

Product: small GTP-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 341; Mature: 341

Protein sequence:

>341_residues
MLKDPPNYFRHLHVPTADEIVKKVLKRYPELKPKSKRPKHIIELEINRVNLTYQIIIDKLSFLDKLPKPESMHPFYLELA
SLTVPYQKYWAAASGLKRLREKLKEMWEDYRALVRAAVSLEEAARFRREAVGRALSMVRRSRGALSTIREFKYAVASLPS
VDFEEPRIVVAGMPSSGKSSFVKAVSTAEVEVASYPFTTKQVHLGHFERGGRRFQVVDTPGILDRPWDSLNEIERKAVIA
IRHLPNVLLFLYDVSEEGYGVEEQTEVLDNVINVVGKEKVVVALNKIDVANERKVELAEEEASRRGLRTFKLSLKTGEGL
EELLEELVRRAEEDLSAAPKP

Sequences:

>Translated_341_residues
MLKDPPNYFRHLHVPTADEIVKKVLKRYPELKPKSKRPKHIIELEINRVNLTYQIIIDKLSFLDKLPKPESMHPFYLELA
SLTVPYQKYWAAASGLKRLREKLKEMWEDYRALVRAAVSLEEAARFRREAVGRALSMVRRSRGALSTIREFKYAVASLPS
VDFEEPRIVVAGMPSSGKSSFVKAVSTAEVEVASYPFTTKQVHLGHFERGGRRFQVVDTPGILDRPWDSLNEIERKAVIA
IRHLPNVLLFLYDVSEEGYGVEEQTEVLDNVINVVGKEKVVVALNKIDVANERKVELAEEEASRRGLRTFKLSLKTGEGL
EELLEELVRRAEEDLSAAPKP
>Mature_341_residues
MLKDPPNYFRHLHVPTADEIVKKVLKRYPELKPKSKRPKHIIELEINRVNLTYQIIIDKLSFLDKLPKPESMHPFYLELA
SLTVPYQKYWAAASGLKRLREKLKEMWEDYRALVRAAVSLEEAARFRREAVGRALSMVRRSRGALSTIREFKYAVASLPS
VDFEEPRIVVAGMPSSGKSSFVKAVSTAEVEVASYPFTTKQVHLGHFERGGRRFQVVDTPGILDRPWDSLNEIERKAVIA
IRHLPNVLLFLYDVSEEGYGVEEQTEVLDNVINVVGKEKVVVALNKIDVANERKVELAEEEASRRGLRTFKLSLKTGEGL
EELLEELVRRAEEDLSAAPKP

Specific function: Unknown

COG id: COG1084

COG function: function code R; Predicted GTPase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GTP1/OBG family. NOG subfamily [H]

Homologues:

Organism=Homo sapiens, GI55953087, Length=294, Percent_Identity=31.6326530612245, Blast_Score=163, Evalue=2e-40,
Organism=Homo sapiens, GI24308117, Length=168, Percent_Identity=35.7142857142857, Blast_Score=67, Evalue=3e-11,
Organism=Caenorhabditis elegans, GI25145602, Length=326, Percent_Identity=30.0613496932515, Blast_Score=162, Evalue=2e-40,
Organism=Caenorhabditis elegans, GI25145600, Length=326, Percent_Identity=30.0613496932515, Blast_Score=162, Evalue=2e-40,
Organism=Saccharomyces cerevisiae, GI6325164, Length=339, Percent_Identity=28.9085545722714, Blast_Score=162, Evalue=7e-41,
Organism=Drosophila melanogaster, GI19921908, Length=289, Percent_Identity=30.7958477508651, Blast_Score=162, Evalue=3e-40,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006073
- InterPro:   IPR010674
- InterPro:   IPR005225 [H]

Pfam domain/function: PF06858 NOG1 [H]

EC number: NA

Molecular weight: Translated: 38901; Mature: 38901

Theoretical pI: Translated: 9.58; Mature: 9.58

Prosite motif: PS00178 AA_TRNA_LIGASE_I

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKDPPNYFRHLHVPTADEIVKKVLKRYPELKPKSKRPKHIIELEINRVNLTYQIIIDKL
CCCCCHHHHHEECCCCHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEEEEEEEHHHHHHHH
SFLDKLPKPESMHPFYLELASLTVPYQKYWAAASGLKRLREKLKEMWEDYRALVRAAVSL
HHHHHCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EEAARFRREAVGRALSMVRRSRGALSTIREFKYAVASLPSVDFEEPRIVVAGMPSSGKSS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCHHH
FVKAVSTAEVEVASYPFTTKQVHLGHFERGGRRFQVVDTPGILDRPWDSLNEIERKAVIA
HHHHHHHHHEEEECCCCCCCEEECCHHHCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHH
IRHLPNVLLFLYDVSEEGYGVEEQTEVLDNVINVVGKEKVVVALNKIDVANERKVELAEE
HHHHHHHEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEEEECCCCCCHHHHHHH
EASRRGLRTFKLSLKTGEGLEELLEELVRRAEEDLSAAPKP
HHHHCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MLKDPPNYFRHLHVPTADEIVKKVLKRYPELKPKSKRPKHIIELEINRVNLTYQIIIDKL
CCCCCHHHHHEECCCCHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEEEEEEEHHHHHHHH
SFLDKLPKPESMHPFYLELASLTVPYQKYWAAASGLKRLREKLKEMWEDYRALVRAAVSL
HHHHHCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EEAARFRREAVGRALSMVRRSRGALSTIREFKYAVASLPSVDFEEPRIVVAGMPSSGKSS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCHHH
FVKAVSTAEVEVASYPFTTKQVHLGHFERGGRRFQVVDTPGILDRPWDSLNEIERKAVIA
HHHHHHHHHEEEECCCCCCCEEECCHHHCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHH
IRHLPNVLLFLYDVSEEGYGVEEQTEVLDNVINVVGKEKVVVALNKIDVANERKVELAEE
HHHHHHHEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEEEECCCCCCHHHHHHH
EASRRGLRTFKLSLKTGEGLEELLEELVRRAEEDLSAAPKP
HHHHCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]