Click here to switch to the map view.

The map label for this gene is 156937768

Identifier: 156937768

GI number: 156937768

Start: 868353

End: 870542

Strand: Direct

Name: 156937768

Synonym: Igni_0977

Alternate gene names: NA

Gene position: 868353-870542 (Clockwise)

Preceding gene: 156937765

Following gene: 156937769

Centisome position: 66.92

GC content: 54.29

Gene sequence:

>2190_bases
ATGGCCGAGCCCGAGAGGGTTGCTGCGCTAGTGTTGCTCTGGGACCCTCCAGCGATAGCGGCCGTGCTGCGGGGGGACCC
GTCTCTATTGTTGAAGGAAGACATAAATATGAATTACTATTTACTAATAAAAAAGGCATACAGCTTGGAGAACTTTGACG
AGTTTAAGAGGATTGTAAAGGAAGGGCTGGGGGCGCGTTGGGACCCGGAGCTCAAGGCTTGGGTCGTGAGGCCCGCCCTG
AGGGACTACCAAACGGTGACGGAAGCCGTAACGGTCCTTAAAGAGATGGGTGCACGTTTCGAGCTGGTAACTGAGGAAGG
CCCGGTTCCAGTGGAGCTGGACGTCGATGACGTGGACGCGGCCTTCCTAGAGGGGTCGGCGATTATAAACGAGCTAGCTA
AGGATATATCACTATTAGTAAAGTTCAGAACAAAGAAGGACAAAGAGTTGTTCTTTAGATTGGTTGAACTGGCTCCATAT
TACAAAGGACGCTTCTACTTGCCCCCCTTCGGTCGCTTGCCGGCTACCTTGGCCCAAGATGTGGCCGCTAAGGCGACTTC
CTCGACCGCCCTCGTTGCCTCGCAGAGGAGGGAGCAAGGGTACCCACTGTTCTTAGGGAACTCTGTTGTCGTTAAGGTCA
GCGAGGAGAAGGCGGAAGAGTTGCAAACGAAGCTCGCCCCTTACGAGGACTGCGACGTAGAGTCTCCAGAGATAGAAAGA
GAGAGGAGGGAGAACGCCCTCAGCTATTGTGAGTACCGCTGGACGAACTACGCGGGGGAACTGGTCAGAGAGGGGAGGCT
TACCAGGCTTTACGAGATAACTTTAGAGGACGGTTCTGCCTACATCAGAACTTTTAGAGGCTTATTGATTAGACTGCTTA
GGCATTTGAATGTGGACGTCGATAAGTTATATGCAGACTTACCCTTGGAACCCAATGCGGACTTCTTACGGGACTACCAG
AGAGTCGCGGTATCCCAAGCGCTGAAGATGCTCGCCGTTCAAGGGGCGGCGACCGTCCAAGCCGCCACGGGCGCCGGGAA
GACGGAAATGGCAGTAGCCGTAGCGAAGACTCTTCTGGAGAGCGGGCAGGTGAGGAAGGTTTTCTTCTTAAGCTTAAACA
GAACCTTGAACGTTCAAGCTGTAATGAGGTTTAAGAAGTACGGATTAAGCGCGGGGCTGGTGGACTCAGAGAACTTCCAA
GTAGGGGAACCCGTGGTGGCTTGTACGGTGCAAACCCTCTATAGGGCGCTAGTTAAGGTCGGGAAGGCCAAAGAGGTTAA
GGATGACGTGGACGAGGAGATAAGGATGGACTACGCTGAGCTGAGCGACGACAAGGCAGAGAGGCTCTTCGAAGAGTACA
TGAAAGCCGGCTTGGTGATAGTGGACGAGGTACAACACGTCCCCGCCCGCACGGTCTCCGAAGTGGTGCGTGCCAACCCG
TGGTCGCTAAGGCTAGGCCTCTCGGCTACCCCTTGGAGGGACGACGGAAAGGACGTTCTAATTTACGCGTTGATAGGGGA
CGTGGTCCCTAAGAGGATAACCTCTTCGGAGCTGATAGAGAAGGGGTATTTGGTTCCGGTGGAAATAATAATGTTAAAGA
GGAAGGTAACCGTGGACCGCGAGGACCTCAAGGCGTTGGAAGGTCTACAAGGCGCTCAGAAGTACGTCAAGTTGAAGAAC
TACATATTCTATGACTCCGAGAGAAACGCGCAGATAGCGAGGGTAGTGAAGAAGCTGCCGAAGCCAGTACTAGTCTTAGT
AAAAGAGGTAAAACACGCACACGAGTTGTGTAAGGCCATAAAGTCGGAGCGCCTCTCGTGTGCGGTGCTGACCGGCAAGG
AGAGCTCCTCCCAGAGGGAGTCCGTCCTGAGGGCAGTCTTGAGGGGAGACTTGGACGTGGTAGTTGCTACCACCTTGGCC
GACGAGGGCTTGGACCTCCCGCCGCTTAGGTCATTGGTCTTGGCGGCCGGGGGGAGGTCGCAGACGCGCACCCTCCAGAG
GGTCGGGAGGGTCACGAGGCCCTACCCCGGCAAGGAGGTGGGCATAGTAGTTGACGTCTGGGACGACGACCGGGAGGCAG
GAGGGATATTTTATAGGCAAGGGCTGGCCCGCATGTCCCTTTACCGCACTGAAGACATGTGGAAAATTGTGGTTAAAGAT
ATTAAACAATTTCTGAAGGAGAAGAACTGA

Upstream 100 bases:

>100_bases
GCTACGGCGGCTCTCCGGAGAACGGGCGTTATGGATCTTTTAAGTTTTGCTATCAACTCTTGATTAAGGAGGGGAGCCGC
CGGCTAGAAGGTCCAATGAG

Downstream 100 bases:

>100_bases
GCGCGAATGTGATTTAAAACGTAGCTCGCAGGCGGTCCGGGAGGTCATATGGCGGACACGGCCCACAAGGTGATGGCAGA
GGCAATAGGCAAGATAGTAC

Product: type III restriction enzyme, res subunit

Products: NA

Alternate protein names: Type III Restriction Res Subunit; Superfamily II DNA/RNA Helicase; DNA/RNA Repair Helicase; Helicase Domain-Containing Protein; Helicase; DNA Repair Protein Rad; Helicase DNA Repair Rad; ATP-Dependet DEAD/DEAH Box Helicase; DNA Repair Protein RAD; Phage DEAD Box Family Helicase; DNA/RNA Helicase; Restriction Endonuclease Family Protein; Helicase ATP-Dependent Intein-Containing; Type III Restriction; DNA Repair Helicase RAD

Number of amino acids: Translated: 729; Mature: 728

Protein sequence:

>729_residues
MAEPERVAALVLLWDPPAIAAVLRGDPSLLLKEDINMNYYLLIKKAYSLENFDEFKRIVKEGLGARWDPELKAWVVRPAL
RDYQTVTEAVTVLKEMGARFELVTEEGPVPVELDVDDVDAAFLEGSAIINELAKDISLLVKFRTKKDKELFFRLVELAPY
YKGRFYLPPFGRLPATLAQDVAAKATSSTALVASQRREQGYPLFLGNSVVVKVSEEKAEELQTKLAPYEDCDVESPEIER
ERRENALSYCEYRWTNYAGELVREGRLTRLYEITLEDGSAYIRTFRGLLIRLLRHLNVDVDKLYADLPLEPNADFLRDYQ
RVAVSQALKMLAVQGAATVQAATGAGKTEMAVAVAKTLLESGQVRKVFFLSLNRTLNVQAVMRFKKYGLSAGLVDSENFQ
VGEPVVACTVQTLYRALVKVGKAKEVKDDVDEEIRMDYAELSDDKAERLFEEYMKAGLVIVDEVQHVPARTVSEVVRANP
WSLRLGLSATPWRDDGKDVLIYALIGDVVPKRITSSELIEKGYLVPVEIIMLKRKVTVDREDLKALEGLQGAQKYVKLKN
YIFYDSERNAQIARVVKKLPKPVLVLVKEVKHAHELCKAIKSERLSCAVLTGKESSSQRESVLRAVLRGDLDVVVATTLA
DEGLDLPPLRSLVLAAGGRSQTRTLQRVGRVTRPYPGKEVGIVVDVWDDDREAGGIFYRQGLARMSLYRTEDMWKIVVKD
IKQFLKEKN

Sequences:

>Translated_729_residues
MAEPERVAALVLLWDPPAIAAVLRGDPSLLLKEDINMNYYLLIKKAYSLENFDEFKRIVKEGLGARWDPELKAWVVRPAL
RDYQTVTEAVTVLKEMGARFELVTEEGPVPVELDVDDVDAAFLEGSAIINELAKDISLLVKFRTKKDKELFFRLVELAPY
YKGRFYLPPFGRLPATLAQDVAAKATSSTALVASQRREQGYPLFLGNSVVVKVSEEKAEELQTKLAPYEDCDVESPEIER
ERRENALSYCEYRWTNYAGELVREGRLTRLYEITLEDGSAYIRTFRGLLIRLLRHLNVDVDKLYADLPLEPNADFLRDYQ
RVAVSQALKMLAVQGAATVQAATGAGKTEMAVAVAKTLLESGQVRKVFFLSLNRTLNVQAVMRFKKYGLSAGLVDSENFQ
VGEPVVACTVQTLYRALVKVGKAKEVKDDVDEEIRMDYAELSDDKAERLFEEYMKAGLVIVDEVQHVPARTVSEVVRANP
WSLRLGLSATPWRDDGKDVLIYALIGDVVPKRITSSELIEKGYLVPVEIIMLKRKVTVDREDLKALEGLQGAQKYVKLKN
YIFYDSERNAQIARVVKKLPKPVLVLVKEVKHAHELCKAIKSERLSCAVLTGKESSSQRESVLRAVLRGDLDVVVATTLA
DEGLDLPPLRSLVLAAGGRSQTRTLQRVGRVTRPYPGKEVGIVVDVWDDDREAGGIFYRQGLARMSLYRTEDMWKIVVKD
IKQFLKEKN
>Mature_728_residues
AEPERVAALVLLWDPPAIAAVLRGDPSLLLKEDINMNYYLLIKKAYSLENFDEFKRIVKEGLGARWDPELKAWVVRPALR
DYQTVTEAVTVLKEMGARFELVTEEGPVPVELDVDDVDAAFLEGSAIINELAKDISLLVKFRTKKDKELFFRLVELAPYY
KGRFYLPPFGRLPATLAQDVAAKATSSTALVASQRREQGYPLFLGNSVVVKVSEEKAEELQTKLAPYEDCDVESPEIERE
RRENALSYCEYRWTNYAGELVREGRLTRLYEITLEDGSAYIRTFRGLLIRLLRHLNVDVDKLYADLPLEPNADFLRDYQR
VAVSQALKMLAVQGAATVQAATGAGKTEMAVAVAKTLLESGQVRKVFFLSLNRTLNVQAVMRFKKYGLSAGLVDSENFQV
GEPVVACTVQTLYRALVKVGKAKEVKDDVDEEIRMDYAELSDDKAERLFEEYMKAGLVIVDEVQHVPARTVSEVVRANPW
SLRLGLSATPWRDDGKDVLIYALIGDVVPKRITSSELIEKGYLVPVEIIMLKRKVTVDREDLKALEGLQGAQKYVKLKNY
IFYDSERNAQIARVVKKLPKPVLVLVKEVKHAHELCKAIKSERLSCAVLTGKESSSQRESVLRAVLRGDLDVVVATTLAD
EGLDLPPLRSLVLAAGGRSQTRTLQRVGRVTRPYPGKEVGIVVDVWDDDREAGGIFYRQGLARMSLYRTEDMWKIVVKDI
KQFLKEKN

Specific function: Unknown

COG id: COG1061

COG function: function code KL; DNA or RNA helicases of superfamily II

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 82081; Mature: 81950

Theoretical pI: Translated: 6.95; Mature: 6.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAEPERVAALVLLWDPPAIAAVLRGDPSLLLKEDINMNYYLLIKKAYSLENFDEFKRIVK
CCCCCCEEEEEEEECCHHHHHHHCCCCCEEEEECCCCCEEEEEEEHHCCCCHHHHHHHHH
EGLGARWDPELKAWVVRPALRDYQTVTEAVTVLKEMGARFELVTEEGPVPVELDVDDVDA
HHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCEEEEECCCCHHH
AFLEGSAIINELAKDISLLVKFRTKKDKELFFRLVELAPYYKGRFYLPPFGRLPATLAQD
HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCEEECCCCCCCHHHHHHH
VAAKATSSTALVASQRREQGYPLFLGNSVVVKVSEEKAEELQTKLAPYEDCDVESPEIER
HHHHCCCCHHHHHHHHHHCCCCEEECCEEEEEECHHHHHHHHHHCCCCCCCCCCCCHHHH
ERRENALSYCEYRWTNYAGELVREGRLTRLYEITLEDGSAYIRTFRGLLIRLLRHLNVDV
HHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHCCCCH
DKLYADLPLEPNADFLRDYQRVAVSQALKMLAVQGAATVQAATGAGKTEMAVAVAKTLLE
HHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCHHHHHHHHHHHHC
SGQVRKVFFLSLNRTLNVQAVMRFKKYGLSAGLVDSENFQVGEPVVACTVQTLYRALVKV
CCCEEEEEEEEECCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
GKAKEVKDDVDEEIRMDYAELSDDKAERLFEEYMKAGLVIVDEVQHVPARTVSEVVRANP
CCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCEEEEEHHHHCCHHHHHHHHHCCC
WSLRLGLSATPWRDDGKDVLIYALIGDVVPKRITSSELIEKGYLVPVEIIMLKRKVTVDR
CEEEECCCCCCCCCCCCCEEEHHHHHHHHHHHCCHHHHHHCCCCCHHHHHHHHHHCCCCH
EDLKALEGLQGAQKYVKLKNYIFYDSERNAQIARVVKKLPKPVLVLVKEVKHAHELCKAI
HHHHHHHHHHHHHHHHHHHHEEEECCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
KSERLSCAVLTGKESSSQRESVLRAVLRGDLDVVVATTLADEGLDLPPLRSLVLAAGGRS
HHCCCEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCHHHHHHHHCCCCH
QTRTLQRVGRVTRPYPGKEVGIVVDVWDDDREAGGIFYRQGLARMSLYRTEDMWKIVVKD
HHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
IKQFLKEKN
HHHHHHCCC
>Mature Secondary Structure 
AEPERVAALVLLWDPPAIAAVLRGDPSLLLKEDINMNYYLLIKKAYSLENFDEFKRIVK
CCCCCEEEEEEEECCHHHHHHHCCCCCEEEEECCCCCEEEEEEEHHCCCCHHHHHHHHH
EGLGARWDPELKAWVVRPALRDYQTVTEAVTVLKEMGARFELVTEEGPVPVELDVDDVDA
HHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCEEEEECCCCHHH
AFLEGSAIINELAKDISLLVKFRTKKDKELFFRLVELAPYYKGRFYLPPFGRLPATLAQD
HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCEEECCCCCCCHHHHHHH
VAAKATSSTALVASQRREQGYPLFLGNSVVVKVSEEKAEELQTKLAPYEDCDVESPEIER
HHHHCCCCHHHHHHHHHHCCCCEEECCEEEEEECHHHHHHHHHHCCCCCCCCCCCCHHHH
ERRENALSYCEYRWTNYAGELVREGRLTRLYEITLEDGSAYIRTFRGLLIRLLRHLNVDV
HHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHCCCCH
DKLYADLPLEPNADFLRDYQRVAVSQALKMLAVQGAATVQAATGAGKTEMAVAVAKTLLE
HHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCHHHHHHHHHHHHC
SGQVRKVFFLSLNRTLNVQAVMRFKKYGLSAGLVDSENFQVGEPVVACTVQTLYRALVKV
CCCEEEEEEEEECCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
GKAKEVKDDVDEEIRMDYAELSDDKAERLFEEYMKAGLVIVDEVQHVPARTVSEVVRANP
CCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCEEEEEHHHHCCHHHHHHHHHCCC
WSLRLGLSATPWRDDGKDVLIYALIGDVVPKRITSSELIEKGYLVPVEIIMLKRKVTVDR
CEEEECCCCCCCCCCCCCEEEHHHHHHHHHHHCCHHHHHHCCCCCHHHHHHHHHHCCCCH
EDLKALEGLQGAQKYVKLKNYIFYDSERNAQIARVVKKLPKPVLVLVKEVKHAHELCKAI
HHHHHHHHHHHHHHHHHHHHEEEECCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
KSERLSCAVLTGKESSSQRESVLRAVLRGDLDVVVATTLADEGLDLPPLRSLVLAAGGRS
HHCCCEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCHHHHHHHHCCCCH
QTRTLQRVGRVTRPYPGKEVGIVVDVWDDDREAGGIFYRQGLARMSLYRTEDMWKIVVKD
HHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
IKQFLKEKN
HHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA