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The map label for this gene is nudF [H]

Identifier: 156937706

GI number: 156937706

Start: 812346

End: 812771

Strand: Reverse

Name: nudF [H]

Synonym: Igni_0915

Alternate gene names: 156937706

Gene position: 812771-812346 (Counterclockwise)

Preceding gene: 156937708

Following gene: 156937705

Centisome position: 62.64

GC content: 60.33

Gene sequence:

>426_bases
TTGGAGTGCTGCCCGGTGCTCACGGTGGACGTGGTAGTATTTCACGAAGGAAAGGTCTTGCTCGTTAAGAGGGGGGCCGA
GCCCTTCAAGGGCAAGTGGGCCTTGCCCGGGGGCAGGGTGGAGTGCGGAGAGCGCGTGGAGGAAGCGGCCCTGAGAGAGC
TCAAGGAGGAGACCGGGATAGAGGCTGAACTGGTAACTTTAGTGTCGGTCTACTCCGACCCCAACAGAGACCCGAGGGGG
CACTACGTCAGCGTGGCCTTCTTGGCCGCGCCGAAGGGCAACTTAGAGCCCAAAGCGTCTACGGACGCAGCGGAGGCCAA
GTGGTTCGAGCTGTCGGAGGTACCTTGGGAGGACCTGGCCTTCGACCATGCAGAAATACTTAAAGACGCCCTCAAGATGC
TCCTTCACCTGGGCAAATCTCCATGA

Upstream 100 bases:

>100_bases
CAAAGTTGGGCCCCGCGCCGGCTCGGAGGGGCCGTTTTTGACAGGCCTTGAGGGCTCCGCTCAATAAAACGCTTGACCCA
TCTAGCGCGAGGGTACGCGC

Downstream 100 bases:

>100_bases
TGAGAAAGGCGTTCGTAGCAGCTCTCTTACTTGCCCAAGCGGTTTTTCCGTTGAGCGTGGTAGCCACAGTGAAGTCGCTA
GCAATTGTAGTGAAGCCCGT

Product: NUDIX hydrolase

Products: NA

Alternate protein names: ADP-ribose diphosphatase; ADP-ribose phosphohydrolase; Adenosine diphosphoribose pyrophosphatase; ADPR-PPase [H]

Number of amino acids: Translated: 141; Mature: 141

Protein sequence:

>141_residues
MECCPVLTVDVVVFHEGKVLLVKRGAEPFKGKWALPGGRVECGERVEEAALRELKEETGIEAELVTLVSVYSDPNRDPRG
HYVSVAFLAAPKGNLEPKASTDAAEAKWFELSEVPWEDLAFDHAEILKDALKMLLHLGKSP

Sequences:

>Translated_141_residues
MECCPVLTVDVVVFHEGKVLLVKRGAEPFKGKWALPGGRVECGERVEEAALRELKEETGIEAELVTLVSVYSDPNRDPRG
HYVSVAFLAAPKGNLEPKASTDAAEAKWFELSEVPWEDLAFDHAEILKDALKMLLHLGKSP
>Mature_141_residues
MECCPVLTVDVVVFHEGKVLLVKRGAEPFKGKWALPGGRVECGERVEEAALRELKEETGIEAELVTLVSVYSDPNRDPRG
HYVSVAFLAAPKGNLEPKASTDAAEAKWFELSEVPWEDLAFDHAEILKDALKMLLHLGKSP

Specific function: Unknown

COG id: COG1051

COG function: function code F; ADP-ribose pyrophosphatase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 nudix hydrolase domain [H]

Homologues:

Organism=Caenorhabditis elegans, GI17509257, Length=99, Percent_Identity=32.3232323232323, Blast_Score=64, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020476
- InterPro:   IPR020084
- InterPro:   IPR000086
- InterPro:   IPR015797 [H]

Pfam domain/function: PF00293 NUDIX [H]

EC number: =3.6.1.13 [H]

Molecular weight: Translated: 15539; Mature: 15539

Theoretical pI: Translated: 4.77; Mature: 4.77

Prosite motif: PS00893 NUDIX

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MECCPVLTVDVVVFHEGKVLLVKRGAEPFKGKWALPGGRVECGERVEEAALRELKEETGI
CCCCCCEEEEEEEEECCCEEEEECCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHHHHCC
EAELVTLVSVYSDPNRDPRGHYVSVAFLAAPKGNLEPKASTDAAEAKWFELSEVPWEDLA
CHHHHHHHHHHCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCHHHHEEECCCCCHHHHC
FDHAEILKDALKMLLHLGKSP
CCHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MECCPVLTVDVVVFHEGKVLLVKRGAEPFKGKWALPGGRVECGERVEEAALRELKEETGI
CCCCCCEEEEEEEEECCCEEEEECCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHHHHCC
EAELVTLVSVYSDPNRDPRGHYVSVAFLAAPKGNLEPKASTDAAEAKWFELSEVPWEDLA
CHHHHHHHHHHCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCHHHHEEECCCCCHHHHC
FDHAEILKDALKMLLHLGKSP
CCHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087; 9694840 [H]