| Definition | Ignicoccus hospitalis KIN4/I chromosome, complete genome. |
|---|---|
| Accession | NC_009776 |
| Length | 1,297,538 |
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The map label for this gene is 156937705
Identifier: 156937705
GI number: 156937705
Start: 811516
End: 812349
Strand: Reverse
Name: 156937705
Synonym: Igni_0914
Alternate gene names: NA
Gene position: 812349-811516 (Counterclockwise)
Preceding gene: 156937706
Following gene: 156937704
Centisome position: 62.61
GC content: 58.27
Gene sequence:
>834_bases ATGATGAGAAAGGCGTTCGTAGCAGCTCTCTTACTTGCCCAAGCGGTTTTTCCGTTGAGCGTGGTAGCCACAGTGAAGTC GCTAGCAATTGTAGTGAAGCCCGTGGTAGGTGAGGTGACTTACCTGGTCCCCCCGGGGGCCTCGCCGCTGTTCTGGAAGC CCACCGCCGCTCAAATAGAGGAAGCGCTTCGAGCGGACGTGTTCGTCAACACGGTCCACTGGCCCTTCGAGAGGCAGTTG GCCGAGAGGAGGGGCGCCGGCAACGTTCCCGAGCCGGTGCCCGGCACTCCCGGGGCCGCCTTAAGCAAGCTTGGCTTCGC GATATTAAGGCTACCCAACGGGGACTTGAACCCCCACGGTTGGTGGCTCTACGCCCCTAACGCGTTCTTGCTGATGTCCC AAGTGAGCGCCCACGCGTGCGAGGTTGAGCCGAGCTCCTGTGCCAAGTACGTTAACTCCTTCATAGAGGAACTTAAGAAA TCCAGAGAAATCCTAGAGGAGTGTTTCGCCGGGGACAAGAGCGCGGTCGTGATGTTGCCCGGTGAACAGTACATAATCTA CAACTTCGGCGTCGTCACGAAGTTCGTAGTGATGGAGAAGGGGCCTGCCTCCGTCAGCGGGCTGCAAATGAAGAAGGGCG TGGAAGCGCTCAAAGACGCTGACATGCTGGTGGTCTCTGACGTCAGCTCCAATACGCCGGCCGCCAAGTACATGATAGCC CAAGCGCACAGGCTGGGCAAGCCGGTAGTGAAGGTGTACTTGCTGAACCCCCCCGTAGAGACCTTCCATGAATACTTAAA GCTCACGTGCGAAGCGCTGAGCGGAGAGAAATGA
Upstream 100 bases:
>100_bases GGTTCGAGCTGTCGGAGGTACCTTGGGAGGACCTGGCCTTCGACCATGCAGAAATACTTAAAGACGCCCTCAAGATGCTC CTTCACCTGGGCAAATCTCC
Downstream 100 bases:
>100_bases TAACGGAGATAGCCATCGCTACGACTATACTATTGGCCACGCTCCCCCTACCCACGGCCTTGGCCACCTTCTCCTTGGCG TCCCTCTCTGGCGCCATCGG
Product: metal ABC transporter periplasmic protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 277; Mature: 277
Protein sequence:
>277_residues MMRKAFVAALLLAQAVFPLSVVATVKSLAIVVKPVVGEVTYLVPPGASPLFWKPTAAQIEEALRADVFVNTVHWPFERQL AERRGAGNVPEPVPGTPGAALSKLGFAILRLPNGDLNPHGWWLYAPNAFLLMSQVSAHACEVEPSSCAKYVNSFIEELKK SREILEECFAGDKSAVVMLPGEQYIIYNFGVVTKFVVMEKGPASVSGLQMKKGVEALKDADMLVVSDVSSNTPAAKYMIA QAHRLGKPVVKVYLLNPPVETFHEYLKLTCEALSGEK
Sequences:
>Translated_277_residues MMRKAFVAALLLAQAVFPLSVVATVKSLAIVVKPVVGEVTYLVPPGASPLFWKPTAAQIEEALRADVFVNTVHWPFERQL AERRGAGNVPEPVPGTPGAALSKLGFAILRLPNGDLNPHGWWLYAPNAFLLMSQVSAHACEVEPSSCAKYVNSFIEELKK SREILEECFAGDKSAVVMLPGEQYIIYNFGVVTKFVVMEKGPASVSGLQMKKGVEALKDADMLVVSDVSSNTPAAKYMIA QAHRLGKPVVKVYLLNPPVETFHEYLKLTCEALSGEK >Mature_277_residues MMRKAFVAALLLAQAVFPLSVVATVKSLAIVVKPVVGEVTYLVPPGASPLFWKPTAAQIEEALRADVFVNTVHWPFERQL AERRGAGNVPEPVPGTPGAALSKLGFAILRLPNGDLNPHGWWLYAPNAFLLMSQVSAHACEVEPSSCAKYVNSFIEELKK SREILEECFAGDKSAVVMLPGEQYIIYNFGVVTKFVVMEKGPASVSGLQMKKGVEALKDADMLVVSDVSSNTPAAKYMIA QAHRLGKPVVKVYLLNPPVETFHEYLKLTCEALSGEK
Specific function: Unknown
COG id: COG0803
COG function: function code P; ABC-type metal ion transport system, periplasmic component/surface adhesin
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30095; Mature: 30095
Theoretical pI: Translated: 7.96; Mature: 7.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMRKAFVAALLLAQAVFPLSVVATVKSLAIVVKPVVGEVTYLVPPGASPLFWKPTAAQIE CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCEECCCHHHHH EALRADVFVNTVHWPFERQLAERRGAGNVPEPVPGTPGAALSKLGFAILRLPNGDLNPHG HHHHHHHEEEECCCCHHHHHHHHCCCCCCCCCCCCCCCHHHHHHCEEEEECCCCCCCCCC WWLYAPNAFLLMSQVSAHACEVEPSSCAKYVNSFIEELKKSREILEECFAGDKSAVVMLP EEEECCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEC GEQYIIYNFGVVTKFVVMEKGPASVSGLQMKKGVEALKDADMLVVSDVSSNTPAAKYMIA CCEEEEEECHHHHEEEEECCCCCCCCHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHH QAHRLGKPVVKVYLLNPPVETFHEYLKLTCEALSGEK HHHHCCCCEEEEEEECCCHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MMRKAFVAALLLAQAVFPLSVVATVKSLAIVVKPVVGEVTYLVPPGASPLFWKPTAAQIE CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCEECCCHHHHH EALRADVFVNTVHWPFERQLAERRGAGNVPEPVPGTPGAALSKLGFAILRLPNGDLNPHG HHHHHHHEEEECCCCHHHHHHHHCCCCCCCCCCCCCCCHHHHHHCEEEEECCCCCCCCCC WWLYAPNAFLLMSQVSAHACEVEPSSCAKYVNSFIEELKKSREILEECFAGDKSAVVMLP EEEECCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEC GEQYIIYNFGVVTKFVVMEKGPASVSGLQMKKGVEALKDADMLVVSDVSSNTPAAKYMIA CCEEEEEECHHHHEEEEECCCCCCCCHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHH QAHRLGKPVVKVYLLNPPVETFHEYLKLTCEALSGEK HHHHCCCCEEEEEEECCCHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA