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The map label for this gene is rpl15e [H]

Identifier: 156937698

GI number: 156937698

Start: 805766

End: 806503

Strand: Reverse

Name: rpl15e [H]

Synonym: Igni_0907

Alternate gene names: 156937698

Gene position: 806503-805766 (Counterclockwise)

Preceding gene: 156937703

Following gene: 156937696

Centisome position: 62.16

GC content: 60.03

Gene sequence:

>738_bases
ATGTATCGAGCGTTATTAGGCGTTTTAAACCGTCCCATGAGGGTACAGGGGGCACAAAGTATGGCCAGAGGCTTGTACCA
CTTTCTGAGAGAGCAGTGGAAGAGGCCCTTCGACGGCGAGCACGGGGAGTTGATGAAGCAGAGGATCATAAAGTGGAGGA
GGGAGCCGGCGGTAGTCAGAATAGAAAAGCCCACCAGGCTCGACCGGGCCAGGGCGCTGGGGTACAAGGCGAAGCAAGGC
GTCGTAGTGGTCAGAGTGAGGGTTAGGAAGGGCGGCCTCAACAGGCCCAGGCCTAACAAGGGCAGGAGGCCCAAGAGGAT
GGGCGTTTACGGCTACGCCCCGGCCAAGAGCACCAGGCTCATAGCCGAGGAGAGGGCGGCTAGGAAGTACCCCGGCTTGG
AGGTGCTGAACTCCTACTGGGTGGCGGAGGACGGCGAGTACGAGTGGTACGAGGTAATACTAGTGGACCCCCACCACCCG
GCTATATGCAGCGACCCCGAGCTCAAGTGGATATGCGAGAAGCAGCACAGGGGAAGGGTGTTCAGGGGCAAGACCAGCGC
CGGAAGGAAGATGAGGGGCTTGCTCAAGAGCAGGGGCCTCAGGGGCACCCACAACTACAAGTGGAAGAAGAAGGAGAAGG
AAAGGAAGCTGCGCAAGAGGCACGAGGCCTCCGGGAAGGCGAGGCCGTTGGAGCTGGACGTCAGAGAAAAGCCGGATTAC
CACAAGGGGACCCAGTGA

Upstream 100 bases:

>100_bases
GTTGGTGAGCAATATGTAGAAGGGGCCTCCGTCGTACAGCCCCAGCGTCATCTTCGTCGTCAAGACTTGTCTCCCCCTCG
CGATCCACATTCGGGAATAA

Downstream 100 bases:

>100_bases
GCTCCTTCCTCTTTCACGTTTTGATACGATAAAAATTATGTTTTTAGGGCCTGACGAAGCACACCTCGTCCTCACAAGGC
CCCTTGGGCTCTACCTCGAA

Product: 50S ribosomal protein L15e

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 245; Mature: 245

Protein sequence:

>245_residues
MYRALLGVLNRPMRVQGAQSMARGLYHFLREQWKRPFDGEHGELMKQRIIKWRREPAVVRIEKPTRLDRARALGYKAKQG
VVVVRVRVRKGGLNRPRPNKGRRPKRMGVYGYAPAKSTRLIAEERAARKYPGLEVLNSYWVAEDGEYEWYEVILVDPHHP
AICSDPELKWICEKQHRGRVFRGKTSAGRKMRGLLKSRGLRGTHNYKWKKKEKERKLRKRHEASGKARPLELDVREKPDY
HKGTQ

Sequences:

>Translated_245_residues
MYRALLGVLNRPMRVQGAQSMARGLYHFLREQWKRPFDGEHGELMKQRIIKWRREPAVVRIEKPTRLDRARALGYKAKQG
VVVVRVRVRKGGLNRPRPNKGRRPKRMGVYGYAPAKSTRLIAEERAARKYPGLEVLNSYWVAEDGEYEWYEVILVDPHHP
AICSDPELKWICEKQHRGRVFRGKTSAGRKMRGLLKSRGLRGTHNYKWKKKEKERKLRKRHEASGKARPLELDVREKPDY
HKGTQ
>Mature_245_residues
MYRALLGVLNRPMRVQGAQSMARGLYHFLREQWKRPFDGEHGELMKQRIIKWRREPAVVRIEKPTRLDRARALGYKAKQG
VVVVRVRVRKGGLNRPRPNKGRRPKRMGVYGYAPAKSTRLIAEERAARKYPGLEVLNSYWVAEDGEYEWYEVILVDPHHP
AICSDPELKWICEKQHRGRVFRGKTSAGRKMRGLLKSRGLRGTHNYKWKKKEKERKLRKRHEASGKARPLELDVREKPDY
HKGTQ

Specific function: Unknown

COG id: COG1632

COG function: function code J; Ribosomal protein L15E

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein L15e family [H]

Homologues:

Organism=Homo sapiens, GI15431293, Length=182, Percent_Identity=45.0549450549451, Blast_Score=145, Evalue=4e-35,
Organism=Caenorhabditis elegans, GI17541432, Length=206, Percent_Identity=45.1456310679612, Blast_Score=126, Evalue=1e-29,
Organism=Saccharomyces cerevisiae, GI6323057, Length=182, Percent_Identity=42.3076923076923, Blast_Score=137, Evalue=2e-33,
Organism=Saccharomyces cerevisiae, GI6323769, Length=182, Percent_Identity=42.3076923076923, Blast_Score=136, Evalue=4e-33,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000439
- InterPro:   IPR020926
- InterPro:   IPR020925
- InterPro:   IPR012678 [H]

Pfam domain/function: PF00827 Ribosomal_L15e [H]

EC number: NA

Molecular weight: Translated: 28823; Mature: 28823

Theoretical pI: Translated: 11.35; Mature: 11.35

Prosite motif: PS01194 RIBOSOMAL_L15E

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYRALLGVLNRPMRVQGAQSMARGLYHFLREQWKRPFDGEHGELMKQRIIKWRREPAVVR
CHHHHHHHHCCCCEECCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCEEE
IEKPTRLDRARALGYKAKQGVVVVRVRVRKGGLNRPRPNKGRRPKRMGVYGYAPAKSTRL
ECCCCHHHHHHHHCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCEEEECCCCCHHH
IAEERAARKYPGLEVLNSYWVAEDGEYEWYEVILVDPHHPAICSDPELKWICEKQHRGRV
HHHHHHHHHCCCHHHHHHECCCCCCCCEEEEEEEECCCCCCCCCCCCHHHHCCHHHCCCE
FRGKTSAGRKMRGLLKSRGLRGTHNYKWKKKEKERKLRKRHEASGKARPLELDVREKPDY
EECCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEECCCCCCC
HKGTQ
CCCCC
>Mature Secondary Structure
MYRALLGVLNRPMRVQGAQSMARGLYHFLREQWKRPFDGEHGELMKQRIIKWRREPAVVR
CHHHHHHHHCCCCEECCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCEEE
IEKPTRLDRARALGYKAKQGVVVVRVRVRKGGLNRPRPNKGRRPKRMGVYGYAPAKSTRL
ECCCCHHHHHHHHCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCEEEECCCCCHHH
IAEERAARKYPGLEVLNSYWVAEDGEYEWYEVILVDPHHPAICSDPELKWICEKQHRGRV
HHHHHHHHHCCCHHHHHHECCCCCCCCEEEEEEEECCCCCCCCCCCCHHHHCCHHHCCCE
FRGKTSAGRKMRGLLKSRGLRGTHNYKWKKKEKERKLRKRHEASGKARPLELDVREKPDY
EECCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEECCCCCCC
HKGTQ
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA