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The map label for this gene is rps3Ae

Identifier: 156937656

GI number: 156937656

Start: 764748

End: 765386

Strand: Direct

Name: rps3Ae

Synonym: Igni_0863

Alternate gene names: 156937656

Gene position: 764748-765386 (Clockwise)

Preceding gene: 156937655

Following gene: 156937665

Centisome position: 58.94

GC content: 51.49

Gene sequence:

>639_bases
ATGTCTGCTAGGAGGAGGGGAGCGCTCAAGGATAAGTGGAAAATAAAGAAGTGGTATGAGATAATCACGCCGGACGTGTT
CAACAATGTCAGCGTGGGCCAGACCCCGGCCGACGAGGCGTGGAAGCTCATCGGAAGGACCGTGGACACTACCCTATACG
ACATAACCGGCGACTTCACGTACGTACACGTCCACGTGTACCTTCAAATAAACAAGGTAGACGAAGAGGCGTTGAAGGCA
TACACTATATTCAAGGGTCACGAGCTCGCGAGGGATTACATAAGGAGCTTGACCAGAAGGAAGAGCTCCAAGATAGAGGG
CATATTCGACGTCTGGACGAAGGACGGTTACGGCCTGAGGATCACCGTGGATACCTTCACCGCTTACAGGTGTCAGACCA
GCCAGAAGAGGGCTATAAGGAAGATACAGAAGGAAGTGATAGAAGAGATGGTGCCTCAAATGACGTTGGACGAGGTAATA
AATGCCATGCTCTTCGGCGACATAGCTGAGGAGATCTCAAACAGAGCTAGGAAAATCTACCCGATAAGAAGGACCGAAAT
ATACAAGTCGAAAGTCCTCTACATGCCTAGCCCGGAGGGCCCGATTAAGGCGGTCATCGTGCCGAAACCCCCCGCTTAG

Upstream 100 bases:

>100_bases
CGTGCTGAGGCTCAGAAACGCCGCGGACGAGGTCTTGGAGCACGCGTCTTTGGTTGAAGCAATTAAAGGGGTAACCCAAG
CCCGCGAGGGGTAGCAAGGG

Downstream 100 bases:

>100_bases
GGCAGAGGTCGGAGAGCGGGCACTCCGAGCACAGAGGCTTTTTAGCCTTACAGTACTTCCTCCCGAGCAGTATTAGGTAC
ATGTGCGCCTCCCTCGTCCT

Product: 30S ribosomal protein S3Ae

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 212; Mature: 211

Protein sequence:

>212_residues
MSARRRGALKDKWKIKKWYEIITPDVFNNVSVGQTPADEAWKLIGRTVDTTLYDITGDFTYVHVHVYLQINKVDEEALKA
YTIFKGHELARDYIRSLTRRKSSKIEGIFDVWTKDGYGLRITVDTFTAYRCQTSQKRAIRKIQKEVIEEMVPQMTLDEVI
NAMLFGDIAEEISNRARKIYPIRRTEIYKSKVLYMPSPEGPIKAVIVPKPPA

Sequences:

>Translated_212_residues
MSARRRGALKDKWKIKKWYEIITPDVFNNVSVGQTPADEAWKLIGRTVDTTLYDITGDFTYVHVHVYLQINKVDEEALKA
YTIFKGHELARDYIRSLTRRKSSKIEGIFDVWTKDGYGLRITVDTFTAYRCQTSQKRAIRKIQKEVIEEMVPQMTLDEVI
NAMLFGDIAEEISNRARKIYPIRRTEIYKSKVLYMPSPEGPIKAVIVPKPPA
>Mature_211_residues
SARRRGALKDKWKIKKWYEIITPDVFNNVSVGQTPADEAWKLIGRTVDTTLYDITGDFTYVHVHVYLQINKVDEEALKAY
TIFKGHELARDYIRSLTRRKSSKIEGIFDVWTKDGYGLRITVDTFTAYRCQTSQKRAIRKIQKEVIEEMVPQMTLDEVIN
AMLFGDIAEEISNRARKIYPIRRTEIYKSKVLYMPSPEGPIKAVIVPKPPA

Specific function: Unknown

COG id: COG1890

COG function: function code J; Ribosomal protein S3AE

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein S3Ae family

Homologues:

Organism=Homo sapiens, GI4506723, Length=205, Percent_Identity=29.2682926829268, Blast_Score=75, Evalue=3e-14,
Organism=Caenorhabditis elegans, GI17553700, Length=205, Percent_Identity=27.3170731707317, Blast_Score=66, Evalue=1e-11,
Organism=Saccharomyces cerevisiae, GI6323577, Length=202, Percent_Identity=29.7029702970297, Blast_Score=85, Evalue=1e-17,
Organism=Saccharomyces cerevisiae, GI6323474, Length=215, Percent_Identity=28.8372093023256, Blast_Score=84, Evalue=2e-17,
Organism=Drosophila melanogaster, GI17864162, Length=202, Percent_Identity=27.2277227722772, Blast_Score=75, Evalue=3e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RS3A_IGNH4 (A8AAU3)

Other databases:

- EMBL:   CP000816
- RefSeq:   YP_001435452.1
- STRING:   A8AAU3
- GeneID:   5562420
- GenomeReviews:   CP000816_GR
- KEGG:   iho:Igni_0863
- eggNOG:   arNOG07959
- HOGENOM:   HBG402643
- OMA:   GHDTTRE
- ProtClustDB:   PRK04057
- BioCyc:   IHOS453591:IGNI_0863-MONOMER
- GO:   GO:0005840
- GO:   GO:0006412
- HAMAP:   MF_00359
- InterPro:   IPR001593
- PANTHER:   PTHR11830

Pfam domain/function: PF01015 Ribosomal_S3Ae

EC number: NA

Molecular weight: Translated: 24576; Mature: 24445

Theoretical pI: Translated: 9.95; Mature: 9.95

Prosite motif: PS01191 RIBOSOMAL_S3AE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSARRRGALKDKWKIKKWYEIITPDVFNNVSVGQTPADEAWKLIGRTVDTTLYDITGDFT
CCCCCCCCCCHHHHHHHHHHHHCCHHHCCCCCCCCCHHHHHHHHHHHHHHEEEEECCCEE
YVHVHVYLQINKVDEEALKAYTIFKGHELARDYIRSLTRRKSSKIEGIFDVWTKDGYGLR
EEEEEEEEEEECCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCEEE
ITVDTFTAYRCQTSQKRAIRKIQKEVIEEMVPQMTLDEVINAMLFGDIAEEISNRARKIY
EEEECEEEECCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHEEC
PIRRTEIYKSKVLYMPSPEGPIKAVIVPKPPA
CCHHHHHHHHEEEECCCCCCCEEEEEECCCCC
>Mature Secondary Structure 
SARRRGALKDKWKIKKWYEIITPDVFNNVSVGQTPADEAWKLIGRTVDTTLYDITGDFT
CCCCCCCCCHHHHHHHHHHHHCCHHHCCCCCCCCCHHHHHHHHHHHHHHEEEEECCCEE
YVHVHVYLQINKVDEEALKAYTIFKGHELARDYIRSLTRRKSSKIEGIFDVWTKDGYGLR
EEEEEEEEEEECCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCEEE
ITVDTFTAYRCQTSQKRAIRKIQKEVIEEMVPQMTLDEVINAMLFGDIAEEISNRARKIY
EEEECEEEECCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHEEC
PIRRTEIYKSKVLYMPSPEGPIKAVIVPKPPA
CCHHHHHHHHEEEECCCCCCCEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA