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The map label for this gene is nirD [H]

Identifier: 156937632

GI number: 156937632

Start: 744369

End: 745331

Strand: Direct

Name: nirD [H]

Synonym: Igni_0839

Alternate gene names: 156937632

Gene position: 744369-745331 (Clockwise)

Preceding gene: 156937627

Following gene: 156937633

Centisome position: 57.37

GC content: 52.54

Gene sequence:

>963_bases
TTGTTGAGCGAGTTGGATAAGAGGCTGCTGTACGAGTTACAGTACAACTTCCCCTTGACGCCCACCCCCTTCGAGGAGGT
GGCCCGAGCCCTCGGGATATCTCAAGAGCGCGTGTTGGAGAGAACTAAGGAATTGATGGATAATAAGATAATAAAGAGGA
TAGGGTTCACGGTTAACTATAAATCAATGGGTAAGGTAGCGGCCTTGGTTGGGGTGAAGGTGAGGGGGAGGAAGGACGTA
GAGGCGTTGAAGGCCATATTGATGAATAACCCGGAGGTGACCCACAACTACCTAAGGGACGACCCAGACTACCAAGTATG
GTTCACAATAAAGGCCAAGAATATGGAAGTCTTAAAGGAAGAGGTCAAGAACATCTTGGAGCCTTTGGGTTTGAACGACT
ATGTCGTTCTGCCCAGCAAGAAGGTATGCAAGGTGAGCGTTAGGTACGACCCGATAAGGGGCATCGCTTGGAGCCCCTAC
TCCCCCCAGAAGGACGAGGTTCCCAAGCCCGAGGACTTGGGGCTGCCCGAGGAGTTCCCGAAGGACGTCTCTAGGCTGAA
GCCCGTGGAGAGGCCTTACGCGGAGGTGGCGAAGAAGTACGGGATGTCTGAAGAGGAGGTGGTCGAGAAAGTTAAGCTGT
TGTTGAGGGAGGGGGTGCTGAGGAACCCGGGGGCCAGTGTAGACGGCGACAAGATAGGCTTCAAGTACAATTCAATGATA
GTTATGAAAGTTGACGACGACGTGGAGGTCTGTAGGAGAATAGCGGAAGAGGTCCCGGAGGCCTCCCACGTAGTGGCTAG
GGTAGTGGACGAGAGGTGGCCCTACCCAGTCTACTTCGTGTTACACGCCACTAAGAAAGAGCTGGTGGAGGATGTGGCTT
CGAGAGTAATCGAGAAGTTCGACCCATATGACTATAGAAAGTTATACAGTTTGGAGAACTTGAAGCCGGGAGTGGCTCGC
TAA

Upstream 100 bases:

>100_bases
TCCGTTCACCCCGCACACGCGCGCTCGGGCAAAGTTATATTTTCTCCAACGTCGCCCATCATTAACCCGGACCTCCGAAT
TCCCCCTTGGGCACGCGGCT

Downstream 100 bases:

>100_bases
CCGAACGAGATGTAGCAAAGTATTACGCTTTCTCTCTGATTAATAAGGCCCACAGTTCTAAGAGAAGAACGAGGAGAGAG
GCATGCCGGCCAGAGGGATA

Product: AsnC family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 320; Mature: 320

Protein sequence:

>320_residues
MLSELDKRLLYELQYNFPLTPTPFEEVARALGISQERVLERTKELMDNKIIKRIGFTVNYKSMGKVAALVGVKVRGRKDV
EALKAILMNNPEVTHNYLRDDPDYQVWFTIKAKNMEVLKEEVKNILEPLGLNDYVVLPSKKVCKVSVRYDPIRGIAWSPY
SPQKDEVPKPEDLGLPEEFPKDVSRLKPVERPYAEVAKKYGMSEEEVVEKVKLLLREGVLRNPGASVDGDKIGFKYNSMI
VMKVDDDVEVCRRIAEEVPEASHVVARVVDERWPYPVYFVLHATKKELVEDVASRVIEKFDPYDYRKLYSLENLKPGVAR

Sequences:

>Translated_320_residues
MLSELDKRLLYELQYNFPLTPTPFEEVARALGISQERVLERTKELMDNKIIKRIGFTVNYKSMGKVAALVGVKVRGRKDV
EALKAILMNNPEVTHNYLRDDPDYQVWFTIKAKNMEVLKEEVKNILEPLGLNDYVVLPSKKVCKVSVRYDPIRGIAWSPY
SPQKDEVPKPEDLGLPEEFPKDVSRLKPVERPYAEVAKKYGMSEEEVVEKVKLLLREGVLRNPGASVDGDKIGFKYNSMI
VMKVDDDVEVCRRIAEEVPEASHVVARVVDERWPYPVYFVLHATKKELVEDVASRVIEKFDPYDYRKLYSLENLKPGVAR
>Mature_320_residues
MLSELDKRLLYELQYNFPLTPTPFEEVARALGISQERVLERTKELMDNKIIKRIGFTVNYKSMGKVAALVGVKVRGRKDV
EALKAILMNNPEVTHNYLRDDPDYQVWFTIKAKNMEVLKEEVKNILEPLGLNDYVVLPSKKVCKVSVRYDPIRGIAWSPY
SPQKDEVPKPEDLGLPEEFPKDVSRLKPVERPYAEVAKKYGMSEEEVVEKVKLLLREGVLRNPGASVDGDKIGFKYNSMI
VMKVDDDVEVCRRIAEEVPEASHVVARVVDERWPYPVYFVLHATKKELVEDVASRVIEKFDPYDYRKLYSLENLKPGVAR

Specific function: Required for the biosynthesis of heme D1 of nitrite reductase [H]

COG id: COG1522

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011991 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 36859; Mature: 36859

Theoretical pI: Translated: 7.48; Mature: 7.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLSELDKRLLYELQYNFPLTPTPFEEVARALGISQERVLERTKELMDNKIIKRIGFTVNY
CCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCEECH
KSMGKVAALVGVKVRGRKDVEALKAILMNNPEVTHNYLRDDPDYQVWFTIKAKNMEVLKE
HHHHHHHHHHCCEECCCHHHHHHHHHHHCCCHHHHHHHCCCCCEEEEEEEECCCHHHHHH
EVKNILEPLGLNDYVVLPSKKVCKVSVRYDPIRGIAWSPYSPQKDEVPKPEDLGLPEEFP
HHHHHHHHCCCCCEEECCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHH
KDVSRLKPVERPYAEVAKKYGMSEEEVVEKVKLLLREGVLRNPGASVDGDKIGFKYNSMI
HHHHHCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEECCEE
VMKVDDDVEVCRRIAEEVPEASHVVARVVDERWPYPVYFVLHATKKELVEDVASRVIEKF
EEEECCHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCEEEEEECHHHHHHHHHHHHHHHHC
DPYDYRKLYSLENLKPGVAR
CCHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MLSELDKRLLYELQYNFPLTPTPFEEVARALGISQERVLERTKELMDNKIIKRIGFTVNY
CCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCEECH
KSMGKVAALVGVKVRGRKDVEALKAILMNNPEVTHNYLRDDPDYQVWFTIKAKNMEVLKE
HHHHHHHHHHCCEECCCHHHHHHHHHHHCCCHHHHHHHCCCCCEEEEEEEECCCHHHHHH
EVKNILEPLGLNDYVVLPSKKVCKVSVRYDPIRGIAWSPYSPQKDEVPKPEDLGLPEEFP
HHHHHHHHCCCCCEEECCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHH
KDVSRLKPVERPYAEVAKKYGMSEEEVVEKVKLLLREGVLRNPGASVDGDKIGFKYNSMI
HHHHHCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEECCEE
VMKVDDDVEVCRRIAEEVPEASHVVARVVDERWPYPVYFVLHATKKELVEDVASRVIEKF
EEEECCHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCEEEEEECHHHHHHHHHHHHHHHHC
DPYDYRKLYSLENLKPGVAR
CCHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7747927 [H]