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The map label for this gene is 156937629

Identifier: 156937629

GI number: 156937629

Start: 742905

End: 743531

Strand: Reverse

Name: 156937629

Synonym: Igni_0836

Alternate gene names: NA

Gene position: 743531-742905 (Counterclockwise)

Preceding gene: 156937630

Following gene: 156937628

Centisome position: 57.3

GC content: 50.88

Gene sequence:

>627_bases
ATGTCTGAGAAGAGCTTCCAACCCCTAACTAAAGAGTACGCCGAGAGGCTGGCGAAGCTGCTCGACGAGTACGACGAGAT
GAAGGACGAGCTCCACGACCTCTCCAGACAGATCATAAAGGACAGCAAGCTCTGCATTTACGCCATAAGGAGGGGCGAGC
TGGAGAGGGCCGAACGTCTGGTAAAAGAAATGAACGAGTTGAGGGAGAAGCTCAAAGGGCTGCTTAAGGCCAACTTGAGG
TTAGCGACCATAAACATAGCCTTAACGGCCGAGCAAGAGTACGTAGAGGCCCTCAGCATATACTTGTTTGAAAAGGAGAG
GAGGTTCCCGACGCTGGAGGAGGCGGACACCACGGTCCAAGAGTACGTGGCCGGGATAATGGATGCCGCCGGCGAGCTCT
TGAGGATGGCCGTTGATAAGATGCTCAAGGGCGACCTCGAGTACCCGAAGGAGGTCAAAGATGCCATAGAGAACATCTAC
GTGTTCATGCTATATGTAAACCCCAGGGATTACGAATTGAGGAGGAAGATAGACTACGTAAGCAACATACTGAACAAACT
TCAAGAATTCATATTTTATAAAGAAGTGATGGGCTCCGTGAGGACAGAAACCGGTGCTGAGAAGTGA

Upstream 100 bases:

>100_bases
AAGATAACCTTAAACGTGAGGAAGATAAAGGAAAGGTTGGAATTGTTCCCCGAGACGGATGTGCCGTTAATGAAGAAGAG
GTTAAAGGAGGCCGGGATAG

Downstream 100 bases:

>100_bases
TGAGCCGTGTGAGGCCCGAGGCCCCGAGCTTCCGCGAGCTCGCTAGGTGCTTGGGGGCGGAGCCCAAGGTCAAGCTCCTC
CGCAAGGGCAGTTCTCTGTG

Product: haloacid dehalogenase superfamily protein

Products: NA

Alternate protein names: DNA-Directed RNA Polymerase Subunit M; Translin Like Protein; Translin Protein; Translin Family Protein; Translin

Number of amino acids: Translated: 208; Mature: 207

Protein sequence:

>208_residues
MSEKSFQPLTKEYAERLAKLLDEYDEMKDELHDLSRQIIKDSKLCIYAIRRGELERAERLVKEMNELREKLKGLLKANLR
LATINIALTAEQEYVEALSIYLFEKERRFPTLEEADTTVQEYVAGIMDAAGELLRMAVDKMLKGDLEYPKEVKDAIENIY
VFMLYVNPRDYELRRKIDYVSNILNKLQEFIFYKEVMGSVRTETGAEK

Sequences:

>Translated_208_residues
MSEKSFQPLTKEYAERLAKLLDEYDEMKDELHDLSRQIIKDSKLCIYAIRRGELERAERLVKEMNELREKLKGLLKANLR
LATINIALTAEQEYVEALSIYLFEKERRFPTLEEADTTVQEYVAGIMDAAGELLRMAVDKMLKGDLEYPKEVKDAIENIY
VFMLYVNPRDYELRRKIDYVSNILNKLQEFIFYKEVMGSVRTETGAEK
>Mature_207_residues
SEKSFQPLTKEYAERLAKLLDEYDEMKDELHDLSRQIIKDSKLCIYAIRRGELERAERLVKEMNELREKLKGLLKANLRL
ATINIALTAEQEYVEALSIYLFEKERRFPTLEEADTTVQEYVAGIMDAAGELLRMAVDKMLKGDLEYPKEVKDAIENIYV
FMLYVNPRDYELRRKIDYVSNILNKLQEFIFYKEVMGSVRTETGAEK

Specific function: Unknown

COG id: COG2178

COG function: function code J; Predicted RNA-binding protein of the translin family

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24453; Mature: 24321

Theoretical pI: Translated: 4.82; Mature: 4.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEKSFQPLTKEYAERLAKLLDEYDEMKDELHDLSRQIIKDSKLCIYAIRRGELERAERL
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCHHHHHHH
VKEMNELREKLKGLLKANLRLATINIALTAEQEYVEALSIYLFEKERRFPTLEEADTTVQ
HHHHHHHHHHHHHHHHCCCEEEEEEEEEECHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
EYVAGIMDAAGELLRMAVDKMLKGDLEYPKEVKDAIENIYVFMLYVNPRDYELRRKIDYV
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHEEEEEEECCCCHHHHHHHHHH
SNILNKLQEFIFYKEVMGSVRTETGAEK
HHHHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
SEKSFQPLTKEYAERLAKLLDEYDEMKDELHDLSRQIIKDSKLCIYAIRRGELERAERL
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCHHHHHHH
VKEMNELREKLKGLLKANLRLATINIALTAEQEYVEALSIYLFEKERRFPTLEEADTTVQ
HHHHHHHHHHHHHHHHCCCEEEEEEEEEECHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
EYVAGIMDAAGELLRMAVDKMLKGDLEYPKEVKDAIENIYVFMLYVNPRDYELRRKIDYV
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHEEEEEEECCCCHHHHHHHHHH
SNILNKLQEFIFYKEVMGSVRTETGAEK
HHHHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA