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The map label for this gene is 156937408

Identifier: 156937408

GI number: 156937408

Start: 550360

End: 551379

Strand: Reverse

Name: 156937408

Synonym: Igni_0615

Alternate gene names: NA

Gene position: 551379-550360 (Counterclockwise)

Preceding gene: 156937409

Following gene: 156937404

Centisome position: 42.49

GC content: 57.75

Gene sequence:

>1020_bases
ATGTTCAGCGTGGCTACAGTTACGGAGACGAAAGCGATACTTTTGGGCTCTCAAGTGACCGTAGACGGCTTCACCCCTCG
GAGAAAGGTAAGGGTGATCACCCACGCCCACGCTGACCACACGAAGGACATAGGTAAGAGCTTGAGCTATCAAGAAACTA
TCTTGGTTACCGAAGAGACCGCGGTATTCCTAAAACACACCTACCGCAGCTTGAGGAGCACTAGGAAGCTGGTAGTCCTC
AAGCCGGGTCAAACGTACAAGGTGCCCGTCGACTCCCGGAGGGGAGGCTACGAAGTAATCAAGTTCGTGAAGGCCTCCCA
CATCCCCGGCTCCGTCCAAGTGGTCGTGGAAGACGAGGAGGGGCGGACGTTCGGCTACACGGGCGACTTCAAGGAGCCGG
GAACGGGGACCCCGGTCCTCCAAGGGCTCGACGCCCTCGTGGTGGACGCCACCTACGGCTGCCCGCTCTGCATACGGAAG
TACAAAGAGACGATGGATGAGGAGTTGGTGAGGTTGGTACTAGAGCTCTTGGGGAGGGGACCGGTCCACGTGTACGCCTA
CAACGGCAAGCTGCAAGAGGTCATGGAGCTGCTCAGGCTCCACGGGGTGGACGCGCCTTACTTGCTCTCCCGACGGGAGT
TCTTAATAGCAAAGGACCTCGAGAAGCTAGGGTACACCTTCGGCGAGTACTTCCTAGAGGGGAGCCCGGAGGCGAAGGAA
ATAGAGAGGGACGGGTGGTACGTTCGCTTTTCTAAGTTCCACAACTTTAGGCAAGAGAGGGTGAGGGGCAGTAAGGTCCT
ACTAGACGGCTGGCAGTTCGTCCCCGTTCAAAAGGTGGGCCCTAACGCTTGGAGGGTGGGGTTCAGCGACCACGCAGACT
TGGAGGACTTAGAGTACTACGTCCTCGAGTCCAAGGCTGGGGAAATCATAATAGACGCCTCCCGAGCCAGCGCCGCCCAG
TGGTTCGCCTCCAGGCTCGAGCTCTACGGCTTGAGGAAAGTCTCCTATAGGCCTATTTAA

Upstream 100 bases:

>100_bases
TGGTCATTCCGTTCGGGGGCAAGCCCAGCATAAGGACAGTAAGCTTAGAGGCCTGAGCAAGATATTAGTCGTCCTAGCGT
TCTCCGCCTCTGAGGAAAAG

Downstream 100 bases:

>100_bases
GGATTGAACAGCAAGCGGTACGTTAAGAGCACTACGTTAGTGGAGAGCAAGTCGCCCAAGCTTGAGAGTATCGGAATAGT
TATCAAGTCGGGGTCCCAGC

Product: RNA procession exonuclease-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 339; Mature: 339

Protein sequence:

>339_residues
MFSVATVTETKAILLGSQVTVDGFTPRRKVRVITHAHADHTKDIGKSLSYQETILVTEETAVFLKHTYRSLRSTRKLVVL
KPGQTYKVPVDSRRGGYEVIKFVKASHIPGSVQVVVEDEEGRTFGYTGDFKEPGTGTPVLQGLDALVVDATYGCPLCIRK
YKETMDEELVRLVLELLGRGPVHVYAYNGKLQEVMELLRLHGVDAPYLLSRREFLIAKDLEKLGYTFGEYFLEGSPEAKE
IERDGWYVRFSKFHNFRQERVRGSKVLLDGWQFVPVQKVGPNAWRVGFSDHADLEDLEYYVLESKAGEIIIDASRASAAQ
WFASRLELYGLRKVSYRPI

Sequences:

>Translated_339_residues
MFSVATVTETKAILLGSQVTVDGFTPRRKVRVITHAHADHTKDIGKSLSYQETILVTEETAVFLKHTYRSLRSTRKLVVL
KPGQTYKVPVDSRRGGYEVIKFVKASHIPGSVQVVVEDEEGRTFGYTGDFKEPGTGTPVLQGLDALVVDATYGCPLCIRK
YKETMDEELVRLVLELLGRGPVHVYAYNGKLQEVMELLRLHGVDAPYLLSRREFLIAKDLEKLGYTFGEYFLEGSPEAKE
IERDGWYVRFSKFHNFRQERVRGSKVLLDGWQFVPVQKVGPNAWRVGFSDHADLEDLEYYVLESKAGEIIIDASRASAAQ
WFASRLELYGLRKVSYRPI
>Mature_339_residues
MFSVATVTETKAILLGSQVTVDGFTPRRKVRVITHAHADHTKDIGKSLSYQETILVTEETAVFLKHTYRSLRSTRKLVVL
KPGQTYKVPVDSRRGGYEVIKFVKASHIPGSVQVVVEDEEGRTFGYTGDFKEPGTGTPVLQGLDALVVDATYGCPLCIRK
YKETMDEELVRLVLELLGRGPVHVYAYNGKLQEVMELLRLHGVDAPYLLSRREFLIAKDLEKLGYTFGEYFLEGSPEAKE
IERDGWYVRFSKFHNFRQERVRGSKVLLDGWQFVPVQKVGPNAWRVGFSDHADLEDLEYYVLESKAGEIIIDASRASAAQ
WFASRLELYGLRKVSYRPI

Specific function: Unknown

COG id: COG1236

COG function: function code J; Predicted exonuclease of the beta-lactamase fold involved in RNA processing

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 38458; Mature: 38458

Theoretical pI: Translated: 8.54; Mature: 8.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFSVATVTETKAILLGSQVTVDGFTPRRKVRVITHAHADHTKDIGKSLSYQETILVTEET
CCEEEEECCCEEEEECCEEEECCCCCCCEEEEEEECCCCHHHHHHCCCCCCEEEEEECHH
AVFLKHTYRSLRSTRKLVVLKPGQTYKVPVDSRRGGYEVIKFVKASHIPGSVQVVVEDEE
HHHHHHHHHHHHCCCEEEEECCCCEEECCCCCCCCHHHHHHHHHHCCCCCEEEEEEECCC
GRTFGYTGDFKEPGTGTPVLQGLDALVVDATYGCPLCIRKYKETMDEELVRLVLELLGRG
CCEECCCCCCCCCCCCCHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC
PVHVYAYNGKLQEVMELLRLHGVDAPYLLSRREFLIAKDLEKLGYTFGEYFLEGSPEAKE
CEEEEEECCCHHHHHHHHHHCCCCCCHHHCCHHHHHHHHHHHHCCHHHHHHCCCCCCHHH
IERDGWYVRFSKFHNFRQERVRGSKVLLDGWQFVPVQKVGPNAWRVGFSDHADLEDLEYY
HCCCCCEEEHHHHHHHHHHHHCCCEEEEECEEEEEEEECCCCEEEECCCCCCCHHHHEEE
VLESKAGEIIIDASRASAAQWFASRLELYGLRKVSYRPI
EEECCCCCEEEECCHHHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MFSVATVTETKAILLGSQVTVDGFTPRRKVRVITHAHADHTKDIGKSLSYQETILVTEET
CCEEEEECCCEEEEECCEEEECCCCCCCEEEEEEECCCCHHHHHHCCCCCCEEEEEECHH
AVFLKHTYRSLRSTRKLVVLKPGQTYKVPVDSRRGGYEVIKFVKASHIPGSVQVVVEDEE
HHHHHHHHHHHHCCCEEEEECCCCEEECCCCCCCCHHHHHHHHHHCCCCCEEEEEEECCC
GRTFGYTGDFKEPGTGTPVLQGLDALVVDATYGCPLCIRKYKETMDEELVRLVLELLGRG
CCEECCCCCCCCCCCCCHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC
PVHVYAYNGKLQEVMELLRLHGVDAPYLLSRREFLIAKDLEKLGYTFGEYFLEGSPEAKE
CEEEEEECCCHHHHHHHHHHCCCCCCHHHCCHHHHHHHHHHHHCCHHHHHHCCCCCCHHH
IERDGWYVRFSKFHNFRQERVRGSKVLLDGWQFVPVQKVGPNAWRVGFSDHADLEDLEYY
HCCCCCEEEHHHHHHHHHHHHCCCEEEEECEEEEEEEECCCCEEEECCCCCCCHHHHEEE
VLESKAGEIIIDASRASAAQWFASRLELYGLRKVSYRPI
EEECCCCCEEEECCHHHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1437556 [H]