Click here to switch to the map view.

The map label for this gene is rpmC [H]

Identifier: 156937384

GI number: 156937384

Start: 530609

End: 530827

Strand: Direct

Name: rpmC [H]

Synonym: Igni_0591

Alternate gene names: 156937384

Gene position: 530609-530827 (Clockwise)

Preceding gene: 156937383

Following gene: 156937385

Centisome position: 40.89

GC content: 45.66

Gene sequence:

>219_bases
ATGACTAACTTGAAGCCGGACGAAATAAGGAAGATGAGCAGGGAAGAGAGGGAACAGAAGTTAAAGGAGCTCAAAAGCGA
GCTGATAACGCTGAGGTACCAAGCCAAGATGGGACACATAGACAACCCGGCTAAAATTAGGAACATCAAAAGGACTATAG
CTCGGATACTCACGATAAACAGAGAAGAAGAGCTGGGCTTGAGAAGGGGCAAACAATGA

Upstream 100 bases:

>100_bases
TCAATGAAATAGTGCAAAAGATAAGGGAAGAAATGCAACAGACCCAACCGGAAGCCCCTACGTTGGAGGAAACGGTCGAA
CAGAGCGGGGGTGAGACGCA

Downstream 100 bases:

>100_bases
AACACACGCCGAAGAACGTTATTTACCACAACTTGGTGGGCCTCCGGGTAGAAGTGTTAGCTCACCCGGACCCCTCAATG
AAGGGCTTGAAGGGTAGGAT

Product: 50S ribosomal protein L29P

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 72; Mature: 71

Protein sequence:

>72_residues
MTNLKPDEIRKMSREEREQKLKELKSELITLRYQAKMGHIDNPAKIRNIKRTIARILTINREEELGLRRGKQ

Sequences:

>Translated_72_residues
MTNLKPDEIRKMSREEREQKLKELKSELITLRYQAKMGHIDNPAKIRNIKRTIARILTINREEELGLRRGKQ
>Mature_71_residues
TNLKPDEIRKMSREEREQKLKELKSELITLRYQAKMGHIDNPAKIRNIKRTIARILTINREEELGLRRGKQ

Specific function: Unknown

COG id: COG0255

COG function: function code J; Ribosomal protein L29

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein L29P family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001854
- InterPro:   IPR018254 [H]

Pfam domain/function: PF00831 Ribosomal_L29 [H]

EC number: NA

Molecular weight: Translated: 8628; Mature: 8497

Theoretical pI: Translated: 11.05; Mature: 11.05

Prosite motif: PS00579 RIBOSOMAL_L29

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTNLKPDEIRKMSREEREQKLKELKSELITLRYQAKMGHIDNPAKIRNIKRTIARILTIN
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCC
REEELGLRRGKQ
CHHHHHHCCCCC
>Mature Secondary Structure 
TNLKPDEIRKMSREEREQKLKELKSELITLRYQAKMGHIDNPAKIRNIKRTIARILTIN
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCC
REEELGLRRGKQ
CHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA