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The map label for this gene is uspF [C]

Identifier: 156937357

GI number: 156937357

Start: 506636

End: 507079

Strand: Reverse

Name: uspF [C]

Synonym: Igni_0564

Alternate gene names: 156937357

Gene position: 507079-506636 (Counterclockwise)

Preceding gene: 156937358

Following gene: 156937356

Centisome position: 39.08

GC content: 58.33

Gene sequence:

>444_bases
TTGAAGAAGGCGCTCGTCGCCGTCGATGGCTCCGAGTACAGCAAGTACGCCGTAGAGTACGTCTCCGACTTGTTGAACAA
GGACTCGTGGGAGGTAGTGGTACTTCACGTCATCCCCAGCATGGAGGAGTTCGGCATAGAGAGCGTCGCGCCGCCCTCGC
TGGTCGCACAGCTCCTCGAGGAACTTAAGGAGAACGCCAAGAAGATAGTGGAGGAGTCGGCGAAGGTGTTCCAAGACAAG
GGCTTCAAGGTCTCGACCCTAATCAAGGAGGGCCACGTGGGCAAGACCATAGTGGAGACCGCGAAGGAGTTGGACGCAGA
CCTAATAGCCCTCGGCACTAGGGGCCTTAGCGGAATCAAGGCAATAATTTTGGGCAGCGTAGCCCGCTACGTAGCCAACC
ACGCCCACTGTCCGGTCCTCGTGGTCCGGAAGAAGGGGGCTTGA

Upstream 100 bases:

>100_bases
CTCTTAAGCGTCCTCGGACTCCTCTATATATTGAAGAAGCCGCTCGGCTGACCCCAATCCAAAAACCTCTCGTGAGGTAT
TTAGTAGCGGGAGGAGGAGT

Downstream 100 bases:

>100_bases
AAGCATGGAAGACCTCGCTAAGAAGTGGTTGGGAAAGCCTTGGGTTAGGGAGGCCGACCCCGACCTAACCAAGGACTTGG
GAAACGGTTGGGTGGAGTGC

Product: UspA domain-containing protein

Products: NA

Alternate protein names: USP Sll1388 [H]

Number of amino acids: Translated: 147; Mature: 147

Protein sequence:

>147_residues
MKKALVAVDGSEYSKYAVEYVSDLLNKDSWEVVVLHVIPSMEEFGIESVAPPSLVAQLLEELKENAKKIVEESAKVFQDK
GFKVSTLIKEGHVGKTIVETAKELDADLIALGTRGLSGIKAIILGSVARYVANHAHCPVLVVRKKGA

Sequences:

>Translated_147_residues
MKKALVAVDGSEYSKYAVEYVSDLLNKDSWEVVVLHVIPSMEEFGIESVAPPSLVAQLLEELKENAKKIVEESAKVFQDK
GFKVSTLIKEGHVGKTIVETAKELDADLIALGTRGLSGIKAIILGSVARYVANHAHCPVLVVRKKGA
>Mature_147_residues
MKKALVAVDGSEYSKYAVEYVSDLLNKDSWEVVVLHVIPSMEEFGIESVAPPSLVAQLLEELKENAKKIVEESAKVFQDK
GFKVSTLIKEGHVGKTIVETAKELDADLIALGTRGLSGIKAIILGSVARYVANHAHCPVLVVRKKGA

Specific function: Unknown

COG id: COG0589

COG function: function code T; Universal stress protein UspA and related nucleotide-binding proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the universal stress protein A family [H]

Homologues:

None

Paralogues:

None

Copy number: 80 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014729
- InterPro:   IPR006015
- InterPro:   IPR006016 [H]

Pfam domain/function: PF00582 Usp [H]

EC number: NA

Molecular weight: Translated: 15915; Mature: 15915

Theoretical pI: Translated: 6.96; Mature: 6.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKALVAVDGSEYSKYAVEYVSDLLNKDSWEVVVLHVIPSMEEFGIESVAPPSLVAQLLE
CCCEEEEECCCHHHHHHHHHHHHHHCCCCCEEEEEEECCCHHHCCCCCCCCHHHHHHHHH
ELKENAKKIVEESAKVFQDKGFKVSTLIKEGHVGKTIVETAKELDADLIALGTRGLSGIK
HHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCHHHHHHHHHHCHHHHHHCCCCHHHHH
AIILGSVARYVANHAHCPVLVVRKKGA
HHHHHHHHHHHHCCCCCCEEEEECCCC
>Mature Secondary Structure
MKKALVAVDGSEYSKYAVEYVSDLLNKDSWEVVVLHVIPSMEEFGIESVAPPSLVAQLLE
CCCEEEEECCCHHHHHHHHHHHHHHCCCCCEEEEEEECCCHHHCCCCCCCCHHHHHHHHH
ELKENAKKIVEESAKVFQDKGFKVSTLIKEGHVGKTIVETAKELDADLIALGTRGLSGIK
HHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCHHHHHHHHHHCHHHHHHCCCCHHHHH
AIILGSVARYVANHAHCPVLVVRKKGA
HHHHHHHHHHHHCCCCCCEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]