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The map label for this gene is 156937354

Identifier: 156937354

GI number: 156937354

Start: 503906

End: 505030

Strand: Direct

Name: 156937354

Synonym: Igni_0561

Alternate gene names: NA

Gene position: 503906-505030 (Clockwise)

Preceding gene: 156937349

Following gene: 156937355

Centisome position: 38.84

GC content: 55.11

Gene sequence:

>1125_bases
TTGCAAAAGCTTTCGCTAAATCTAGAAAAAGATTTCACGTTCTTCACTGAAGGAGGCTCCTTATCGATAGACACAAAAGA
CAACTTGCTGGCTATCGCGGTATCCAAGGCTTCTCCCAGAGGTGAGAGGAACGACGAGGAGGGGGGCCACGCGTACGTGG
TCACGAAGAAGGGTAAAGTGATAATGAGCTGGAGGTTTGACTCGCAGAAGGGGTTTAACTGCGCCGCCTTCAAGCCCGAC
AGCGACGTAGTGATCTTCGGCAACGACGACGGTTCCTTATACGTTTTCAAGACTGATGGTGAAATGATCAAGAAGGTTGA
CTTGGACGCCGCGATTTACTCGTGCGCCTTCTCCCCCTCGGGCTCGTTCGTGGCCCTCGGGACGGAGGGCGGGAAGGTAT
CGGTGAGGGACTCCTCGTTCGAGCCCTTGTGGGAATACTTGGCCGAGGACAACGTGTGGGGGCTGAGCTGGTCTCCGGAC
GAAAGGTACGTGGCCGTGGCGAGCCACGACGGCCACTTGTACGTACTCACCAAGCCCAAGGAGGTCTGGAAGGACGACTT
GGGAGCCCCGGTCAACAAGGCAAAGTGGTGTGGCAACTACCTGGCGGCGTCTACTTGGGAAGGGTTGGTGGTAACTTACG
ACGCCTCCGACCCGCAGAGCCCCTCTAAGCTCTGGGAGGGGAGGTTGGGCTCTAACGTCTGGGGGCTGGACTTCGACGAC
GCGTGTTCCTACTTGGCGGCCGGCAGCAGAGGGTCTGACTTGGTGATCTTCGATACTGAAGGTAACATGACGCTATCTGT
GAAACCCGGGCCCGTGGACGACTTGTCTTGGAGGGGCCCCTCCTTGGCAGTGGCCAGCAAGAACAAGGTCGAAGTTTTCA
AGACGATGAGCTGTGTGCCGTACATCCTTCCAACCCTCAAGAGGTTCAAGGCGGCCAGCTTCTCAAAGCCAGAGAACATA
GATTTCATAGAAATGTCCAAGTTGTTCTACGCGCTTCTCGGAAGACCTAAAAAGGTCAAAGTTAATGGTGAGACCTACTG
GGTTAAGGTGATAGACGGCGACTTCTTGTACATATTCTCCCAACACGACGGGGAGGTGGAGGTGGAGATAGTTGATGAGG
GTTAG

Upstream 100 bases:

>100_bases
CTACCCTAAGCCTCTGGGACTGACTATATCATGGTTACCCGCAGCGAATCTCCTCCCACAAAATAAGCTCGGCTTTGACG
CCGAAAACGGTAGAGCGGGG

Downstream 100 bases:

>100_bases
CGAAGAGGAGGCGAAGAGGATAGCGGAGAGGCTGAACTACAGGTGGCCCGACCGGACGGTGGTGGCGGTGGCTCAAGAGT
ACAAGAGCGGGAAGGTATTG

Product: WD-40 repeat-containing protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 374; Mature: 374

Protein sequence:

>374_residues
MQKLSLNLEKDFTFFTEGGSLSIDTKDNLLAIAVSKASPRGERNDEEGGHAYVVTKKGKVIMSWRFDSQKGFNCAAFKPD
SDVVIFGNDDGSLYVFKTDGEMIKKVDLDAAIYSCAFSPSGSFVALGTEGGKVSVRDSSFEPLWEYLAEDNVWGLSWSPD
ERYVAVASHDGHLYVLTKPKEVWKDDLGAPVNKAKWCGNYLAASTWEGLVVTYDASDPQSPSKLWEGRLGSNVWGLDFDD
ACSYLAAGSRGSDLVIFDTEGNMTLSVKPGPVDDLSWRGPSLAVASKNKVEVFKTMSCVPYILPTLKRFKAASFSKPENI
DFIEMSKLFYALLGRPKKVKVNGETYWVKVIDGDFLYIFSQHDGEVEVEIVDEG

Sequences:

>Translated_374_residues
MQKLSLNLEKDFTFFTEGGSLSIDTKDNLLAIAVSKASPRGERNDEEGGHAYVVTKKGKVIMSWRFDSQKGFNCAAFKPD
SDVVIFGNDDGSLYVFKTDGEMIKKVDLDAAIYSCAFSPSGSFVALGTEGGKVSVRDSSFEPLWEYLAEDNVWGLSWSPD
ERYVAVASHDGHLYVLTKPKEVWKDDLGAPVNKAKWCGNYLAASTWEGLVVTYDASDPQSPSKLWEGRLGSNVWGLDFDD
ACSYLAAGSRGSDLVIFDTEGNMTLSVKPGPVDDLSWRGPSLAVASKNKVEVFKTMSCVPYILPTLKRFKAASFSKPENI
DFIEMSKLFYALLGRPKKVKVNGETYWVKVIDGDFLYIFSQHDGEVEVEIVDEG
>Mature_374_residues
MQKLSLNLEKDFTFFTEGGSLSIDTKDNLLAIAVSKASPRGERNDEEGGHAYVVTKKGKVIMSWRFDSQKGFNCAAFKPD
SDVVIFGNDDGSLYVFKTDGEMIKKVDLDAAIYSCAFSPSGSFVALGTEGGKVSVRDSSFEPLWEYLAEDNVWGLSWSPD
ERYVAVASHDGHLYVLTKPKEVWKDDLGAPVNKAKWCGNYLAASTWEGLVVTYDASDPQSPSKLWEGRLGSNVWGLDFDD
ACSYLAAGSRGSDLVIFDTEGNMTLSVKPGPVDDLSWRGPSLAVASKNKVEVFKTMSCVPYILPTLKRFKAASFSKPENI
DFIEMSKLFYALLGRPKKVKVNGETYWVKVIDGDFLYIFSQHDGEVEVEIVDEG

Specific function: Unknown

COG id: COG2319

COG function: function code R; FOG: WD40 repeat

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 41294; Mature: 41294

Theoretical pI: Translated: 4.65; Mature: 4.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQKLSLNLEKDFTFFTEGGSLSIDTKDNLLAIAVSKASPRGERNDEEGGHAYVVTKKGKV
CCCEEEEECCCEEEEECCCEEEEECCCCEEEEEEECCCCCCCCCCCCCCEEEEEEECCCE
IMSWRFDSQKGFNCAAFKPDSDVVIFGNDDGSLYVFKTDGEMIKKVDLDAAIYSCAFSPS
EEEEEECCCCCCEEEEECCCCCEEEEECCCCEEEEEECCCCEEEEECCCEEEEEEEECCC
GSFVALGTEGGKVSVRDSSFEPLWEYLAEDNVWGLSWSPDERYVAVASHDGHLYVLTKPK
CCEEEEECCCCEEEEECCCCHHHHHHHHCCCEEEEECCCCCCEEEEEECCCEEEEEECCH
EVWKDDLGAPVNKAKWCGNYLAASTWEGLVVTYDASDPQSPSKLWEGRLGSNVWGLDFDD
HHHHHHCCCCCCHHHHHCCHHCCCCCCCEEEEECCCCCCCHHHHHCCCCCCCCCCCCHHH
ACSYLAAGSRGSDLVIFDTEGNMTLSVKPGPVDDLSWRGPSLAVASKNKVEVFKTMSCVP
HHHHHHCCCCCCEEEEEECCCCEEEEECCCCCCCCCCCCCEEEEECCCCEEEEEHHHHHH
YILPTLKRFKAASFSKPENIDFIEMSKLFYALLGRPKKVKVNGETYWVKVIDGDFLYIFS
HHHHHHHHHHHCCCCCCCCCCEEHHHHHHHHHHCCCEEEEECCCEEEEEEECCCEEEEEE
QHDGEVEVEIVDEG
CCCCEEEEEEEECC
>Mature Secondary Structure
MQKLSLNLEKDFTFFTEGGSLSIDTKDNLLAIAVSKASPRGERNDEEGGHAYVVTKKGKV
CCCEEEEECCCEEEEECCCEEEEECCCCEEEEEEECCCCCCCCCCCCCCEEEEEEECCCE
IMSWRFDSQKGFNCAAFKPDSDVVIFGNDDGSLYVFKTDGEMIKKVDLDAAIYSCAFSPS
EEEEEECCCCCCEEEEECCCCCEEEEECCCCEEEEEECCCCEEEEECCCEEEEEEEECCC
GSFVALGTEGGKVSVRDSSFEPLWEYLAEDNVWGLSWSPDERYVAVASHDGHLYVLTKPK
CCEEEEECCCCEEEEECCCCHHHHHHHHCCCEEEEECCCCCCEEEEEECCCEEEEEECCH
EVWKDDLGAPVNKAKWCGNYLAASTWEGLVVTYDASDPQSPSKLWEGRLGSNVWGLDFDD
HHHHHHCCCCCCHHHHHCCHHCCCCCCCEEEEECCCCCCCHHHHHCCCCCCCCCCCCHHH
ACSYLAAGSRGSDLVIFDTEGNMTLSVKPGPVDDLSWRGPSLAVASKNKVEVFKTMSCVP
HHHHHHCCCCCCEEEEEECCCCEEEEECCCCCCCCCCCCCEEEEECCCCEEEEEHHHHHH
YILPTLKRFKAASFSKPENIDFIEMSKLFYALLGRPKKVKVNGETYWVKVIDGDFLYIFS
HHHHHHHHHHHCCCCCCCCCCEEHHHHHHHHHHCCCEEEEECCCEEEEEEECCCEEEEEE
QHDGEVEVEIVDEG
CCCCEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA