Click here to switch to the map view.

The map label for this gene is 156937350

Identifier: 156937350

GI number: 156937350

Start: 501020

End: 501985

Strand: Reverse

Name: 156937350

Synonym: Igni_0557

Alternate gene names: NA

Gene position: 501985-501020 (Counterclockwise)

Preceding gene: 156937351

Following gene: 156937348

Centisome position: 38.69

GC content: 60.56

Gene sequence:

>966_bases
GTGCGCTCAGGTAACGTCAAAGTCCTAACCCACTGGGACGCGGACGGCATAGTCTCGGCGGCCAAGGCGCTTAGGAAGCT
GGGGGAGGTCGAGGTCTACGTCCCCCGTATCGGGAGGTGGTCCTTCGAGGCCGTGCCCCCAGAGGCCCTCGGGGGAAAGC
TGTACGTAATGGATTATTCCATGCCGTACGAGGACTGGCAGAGGCTCTGCGAGGGCGTCGAGGGGTTGGTAGTCCTAGAC
CACCACGCCGCGCCCAAGCCCCCTTGCGGGGAGGTCTACAACCCCGCTTTAGAGGGGAACTACGTCCCGAGCGCCTCCTT
GGTGGTCTCCGACTACTTCGGGCTGCCGTACGACTGGCGGGACGCGGTGGCTATAGCCGGGGACCTCCACGACCCGTGGG
GCAACGAGGTCTGGGAGGCCATATTGAGGAAGGAGAAAGTGCGTGGGGAGGACGTCGTAGAAGCGGCGGCCCTCCTGAAC
TCTTGCTACAAGCTACTGGACTACGACTGCATATACTACTCAATAAAGAAGGTCTCTAAGGCTAACAGCTTGAGCGAAAT
CTTGGAGGACCGGAGGTTGCGAGCTAAGAGGGAGGAAGCGCTCAAGCTGGTGGAGGAGCTGGAGCGGAGGGCGGAGTGCT
GGGACGAGGGGTACAGGAGGGTTTGCGTAGTAAGGGACGAGAGGGCGGCGCTGGTAGCCTCCTCCCTCTGGAAGAGGTTG
AACAGGGGTAAGGAGACGATCATAGTGATCGCTTGGGACGCCGGCGCTAGGGTGTACTGCAGGGGCGGGAAGAAGGACTA
TACCGTCCTAATAGAGGCGCTCAGGAGCGCCGGGATAAAGGAAGTGGGTGGGAAGGACGTCGTCTGTTCGGCGAACTTGA
GGAGCCACGAGTTGGAAAAGGTCCTCAAGATCTTAGACTTACACCTCGAGCTTCCTTCGTCCGTAGGGGGCGAGAAGGGT
CCTTAA

Upstream 100 bases:

>100_bases
CTGGGGAGCGGGGAGGAGGTCGAAAGGGCTCTACTCAAAGTGGCGCCGGAGTTCAAGGTTAGGAGGAGGAGGGCGTTGCA
CCTAAAGGAGGGCGAGGAGG

Downstream 100 bases:

>100_bases
AAATTTAAAAAGATCTGTACGGGGAGGGTCCCGGAGCCGGGTCGTCTAGCGGCCAAGGATGCGGGGCTCTGGCCCCCGTG
ACCGGGGTTCGAATCCCCGC

Product: hypothetical protein

Products: NA

Alternate protein names: Single-Stranded DNA-Specific Exonuclease

Number of amino acids: Translated: 321; Mature: 321

Protein sequence:

>321_residues
MRSGNVKVLTHWDADGIVSAAKALRKLGEVEVYVPRIGRWSFEAVPPEALGGKLYVMDYSMPYEDWQRLCEGVEGLVVLD
HHAAPKPPCGEVYNPALEGNYVPSASLVVSDYFGLPYDWRDAVAIAGDLHDPWGNEVWEAILRKEKVRGEDVVEAAALLN
SCYKLLDYDCIYYSIKKVSKANSLSEILEDRRLRAKREEALKLVEELERRAECWDEGYRRVCVVRDERAALVASSLWKRL
NRGKETIIVIAWDAGARVYCRGGKKDYTVLIEALRSAGIKEVGGKDVVCSANLRSHELEKVLKILDLHLELPSSVGGEKG
P

Sequences:

>Translated_321_residues
MRSGNVKVLTHWDADGIVSAAKALRKLGEVEVYVPRIGRWSFEAVPPEALGGKLYVMDYSMPYEDWQRLCEGVEGLVVLD
HHAAPKPPCGEVYNPALEGNYVPSASLVVSDYFGLPYDWRDAVAIAGDLHDPWGNEVWEAILRKEKVRGEDVVEAAALLN
SCYKLLDYDCIYYSIKKVSKANSLSEILEDRRLRAKREEALKLVEELERRAECWDEGYRRVCVVRDERAALVASSLWKRL
NRGKETIIVIAWDAGARVYCRGGKKDYTVLIEALRSAGIKEVGGKDVVCSANLRSHELEKVLKILDLHLELPSSVGGEKG
P
>Mature_321_residues
MRSGNVKVLTHWDADGIVSAAKALRKLGEVEVYVPRIGRWSFEAVPPEALGGKLYVMDYSMPYEDWQRLCEGVEGLVVLD
HHAAPKPPCGEVYNPALEGNYVPSASLVVSDYFGLPYDWRDAVAIAGDLHDPWGNEVWEAILRKEKVRGEDVVEAAALLN
SCYKLLDYDCIYYSIKKVSKANSLSEILEDRRLRAKREEALKLVEELERRAECWDEGYRRVCVVRDERAALVASSLWKRL
NRGKETIIVIAWDAGARVYCRGGKKDYTVLIEALRSAGIKEVGGKDVVCSANLRSHELEKVLKILDLHLELPSSVGGEKG
P

Specific function: Unknown

COG id: COG0608

COG function: function code L; Single-stranded DNA-specific exonuclease

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35973; Mature: 35973

Theoretical pI: Translated: 6.02; Mature: 6.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRSGNVKVLTHWDADGIVSAAKALRKLGEVEVYVPRIGRWSFEAVPPEALGGKLYVMDYS
CCCCCEEEEEEECCCHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCHHHHCCEEEEEECC
MPYEDWQRLCEGVEGLVVLDHHAAPKPPCGEVYNPALEGNYVPSASLVVSDYFGLPYDWR
CCHHHHHHHHHCCCCEEEEECCCCCCCCCCHHCCCCCCCCCCCCHHHHHHHHCCCCCCCC
DAVAIAGDLHDPWGNEVWEAILRKEKVRGEDVVEAAALLNSCYKLLDYDCIYYSIKKVSK
CHHEEECCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ANSLSEILEDRRLRAKREEALKLVEELERRAECWDEGYRRVCVVRDERAALVASSLWKRL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHH
NRGKETIIVIAWDAGARVYCRGGKKDYTVLIEALRSAGIKEVGGKDVVCSANLRSHELEK
CCCCCEEEEEEECCCCEEEECCCCCHHHHHHHHHHHCCCHHCCCCCEEEECCCCHHHHHH
VLKILDLHLELPSSVGGEKGP
HHHHHHHHHCCCHHCCCCCCC
>Mature Secondary Structure
MRSGNVKVLTHWDADGIVSAAKALRKLGEVEVYVPRIGRWSFEAVPPEALGGKLYVMDYS
CCCCCEEEEEEECCCHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCHHHHCCEEEEEECC
MPYEDWQRLCEGVEGLVVLDHHAAPKPPCGEVYNPALEGNYVPSASLVVSDYFGLPYDWR
CCHHHHHHHHHCCCCEEEEECCCCCCCCCCHHCCCCCCCCCCCCHHHHHHHHCCCCCCCC
DAVAIAGDLHDPWGNEVWEAILRKEKVRGEDVVEAAALLNSCYKLLDYDCIYYSIKKVSK
CHHEEECCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ANSLSEILEDRRLRAKREEALKLVEELERRAECWDEGYRRVCVVRDERAALVASSLWKRL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHH
NRGKETIIVIAWDAGARVYCRGGKKDYTVLIEALRSAGIKEVGGKDVVCSANLRSHELEK
CCCCCEEEEEEECCCCEEEECCCCCHHHHHHHHHHHCCCHHCCCCCEEEECCCCHHHHHH
VLKILDLHLELPSSVGGEKGP
HHHHHHHHHCCCHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA