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The map label for this gene is hybD [C]

Identifier: 156937298

GI number: 156937298

Start: 447361

End: 447903

Strand: Direct

Name: hybD [C]

Synonym: Igni_0504

Alternate gene names: 156937298

Gene position: 447361-447903 (Clockwise)

Preceding gene: 156937297

Following gene: 156937299

Centisome position: 34.48

GC content: 61.14

Gene sequence:

>543_bases
ATGAGGCGCGCGCTGGTCCTAGGGCTGGGGAACCGGAACCTCGGGGACGACGCCGTGGGCAGCTGCCTAGCCGAAGCCTT
GGCGGCGAGGGCCCCGGAGGGGGTGGAAGTGAAGGACGGGGACGACATGGGCTTGGGCCTCTTGGGCTTCCTCGAGGGCT
ACGATTTGGTAATATTCGTGGACGCATCTCCGGACGTAGAGGACGTGGAGGCCTTCCTCATAGAGGCGGAAAAGGCGGAG
TTGGAGGAAGCGAGGGAGATGGTCCAAGACAGCCACAAGGCCGGGCCCGTTGCGCTGGCGGTCCTAGCTAAGAAGTCCGG
CCTATTTCAAGGGAAGGCTTACTTCGTCGCCTTCAAGCCCGAGAGCTTGTGCTTTATGTGTAAGCCCTCCGAGGCCAGCT
TGGAGAGGGCCCTGAAGGCGGCCGAACTCGTTAACAAACTGTTACAGAAGGAAGGCTTCCCCCAGTTCGACTTGGAGGGG
CTTCGGCTCGACCTAATTAGGACGTGTGAGAAGTCCTCTGTCGAGGCGTCTTGGGCCGTTTGA

Upstream 100 bases:

>100_bases
GCCTCCGGGTGTTCGCCCCCGAGTACGTAAGTAGGATAAGGGTGCTCGAGTGCGAGCCCCCTTGCGGGGACTGGGAGAGG
GCTTTGGAGGAGGTGTTGGA

Downstream 100 bases:

>100_bases
CGAAGGTCGTTTTGGACGCGGTGAAACCGATAAAGGGACCCAGTATAGTGGACGTCTCCAAAGAATTAGCCGACGCCGGG
GGAGTGGGGAAGGTCATCAT

Product: hydrogenase maturation protease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 180; Mature: 180

Protein sequence:

>180_residues
MRRALVLGLGNRNLGDDAVGSCLAEALAARAPEGVEVKDGDDMGLGLLGFLEGYDLVIFVDASPDVEDVEAFLIEAEKAE
LEEAREMVQDSHKAGPVALAVLAKKSGLFQGKAYFVAFKPESLCFMCKPSEASLERALKAAELVNKLLQKEGFPQFDLEG
LRLDLIRTCEKSSVEASWAV

Sequences:

>Translated_180_residues
MRRALVLGLGNRNLGDDAVGSCLAEALAARAPEGVEVKDGDDMGLGLLGFLEGYDLVIFVDASPDVEDVEAFLIEAEKAE
LEEAREMVQDSHKAGPVALAVLAKKSGLFQGKAYFVAFKPESLCFMCKPSEASLERALKAAELVNKLLQKEGFPQFDLEG
LRLDLIRTCEKSSVEASWAV
>Mature_180_residues
MRRALVLGLGNRNLGDDAVGSCLAEALAARAPEGVEVKDGDDMGLGLLGFLEGYDLVIFVDASPDVEDVEAFLIEAEKAE
LEEAREMVQDSHKAGPVALAVLAKKSGLFQGKAYFVAFKPESLCFMCKPSEASLERALKAAELVNKLLQKEGFPQFDLEG
LRLDLIRTCEKSSVEASWAV

Specific function: Protease Involved In The C-Terminal Processing Of Hybc, The Large Subunit Of Hydrogenase 2. Specifically Cleaves Off A 15 Amino Acid Peptide From The C Terminus Of The Precursor Of Hybc. [C]

COG id: COG0680

COG function: function code C; Ni,Fe-hydrogenase maturation factor

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 3.4.24.- [C]

Molecular weight: Translated: 19420; Mature: 19420

Theoretical pI: Translated: 4.32; Mature: 4.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRALVLGLGNRNLGDDAVGSCLAEALAARAPEGVEVKDGDDMGLGLLGFLEGYDLVIFV
CCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCEECCCCCCCHHHHHHHCCCCEEEEE
DASPDVEDVEAFLIEAEKAELEEAREMVQDSHKAGPVALAVLAKKSGLFQGKAYFVAFKP
ECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEHHHCCCCCCCEEEEEECC
ESLCFMCKPSEASLERALKAAELVNKLLQKEGFPQFDLEGLRLDLIRTCEKSSVEASWAV
CCEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure
MRRALVLGLGNRNLGDDAVGSCLAEALAARAPEGVEVKDGDDMGLGLLGFLEGYDLVIFV
CCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCEECCCCCCCHHHHHHHCCCCEEEEE
DASPDVEDVEAFLIEAEKAELEEAREMVQDSHKAGPVALAVLAKKSGLFQGKAYFVAFKP
ECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEHHHCCCCCCCEEEEEECC
ESLCFMCKPSEASLERALKAAELVNKLLQKEGFPQFDLEGLRLDLIRTCEKSSVEASWAV
CCEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA