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The map label for this gene is 156937160

Identifier: 156937160

GI number: 156937160

Start: 320726

End: 320995

Strand: Direct

Name: 156937160

Synonym: Igni_0366

Alternate gene names: NA

Gene position: 320726-320995 (Clockwise)

Preceding gene: 156937156

Following gene: 156937161

Centisome position: 24.72

GC content: 52.22

Gene sequence:

>270_bases
TTGAGCGTCACGTTTTGTCCCAAGTGTAAGGCACTGATGCAAGTGGTCAGAAAGGACGGTAAGGTGGTACTCAAGTGTCC
TAGGTGCGGCTACGAGGTGGAGGTGAAGAAGCCCGCCAGGATAGTGAGGGCCGTGGAAAAGGACAAGCACATAATAACAA
CTTCCAAAGTAGTGAAGGCCGAGGAGAGGAGGACCCTGACGGAAGAAGAGAAAGAGATGCTGCAAGACTACTACAGAGAC
ATCTTCCTGGAGAACTTCGGCGGGGAGTGA

Upstream 100 bases:

>100_bases
CGGGCCCCGAGGTGCGTTGCTCTTAAGATATATTTACGGTTAGTTCTCAAGACTTATTACCCCTTGGATCCCTACCTCCC
CTCAGCTGGGTGGTGCTGGA

Downstream 100 bases:

>100_bases
GTTTTTGCTTCCTCCCCGAAGGGGTTAGGGGAGCTAGAGATGAACCCCCTCGCCGCGTTGTTAGCCTTCATACTTACCGT
AATGTTCCTGGAGAGCGGCC

Product: DNA-directed RNA polymerase, subunit M

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 89; Mature: 88

Protein sequence:

>89_residues
MSVTFCPKCKALMQVVRKDGKVVLKCPRCGYEVEVKKPARIVRAVEKDKHIITTSKVVKAEERRTLTEEEKEMLQDYYRD
IFLENFGGE

Sequences:

>Translated_89_residues
MSVTFCPKCKALMQVVRKDGKVVLKCPRCGYEVEVKKPARIVRAVEKDKHIITTSKVVKAEERRTLTEEEKEMLQDYYRD
IFLENFGGE
>Mature_88_residues
SVTFCPKCKALMQVVRKDGKVVLKCPRCGYEVEVKKPARIVRAVEKDKHIITTSKVVKAEERRTLTEEEKEMLQDYYRDI
FLENFGGE

Specific function: Unknown

COG id: COG1594

COG function: function code K; DNA-directed RNA polymerase, subunit M/Transcription elongation factor TFIIS

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10367; Mature: 10236

Theoretical pI: Translated: 8.95; Mature: 8.95

Prosite motif: PS01030 RNA_POL_M_15KD

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.5 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
7.9 %Cys+Met (Translated Protein)
4.5 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
6.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVTFCPKCKALMQVVRKDGKVVLKCPRCGYEVEVKKPARIVRAVEKDKHIITTSKVVKA
CCCCCCCCHHHHHHHHHCCCCEEEECCCCCCEEEECHHHHHHHHHHCCCEEEHHHHHHHH
EERRTLTEEEKEMLQDYYRDIFLENFGGE
HHHHCCCHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
SVTFCPKCKALMQVVRKDGKVVLKCPRCGYEVEVKKPARIVRAVEKDKHIITTSKVVKA
CCCCCCCHHHHHHHHHCCCCEEEECCCCCCEEEECHHHHHHHHHHCCCEEEHHHHHHHH
EERRTLTEEEKEMLQDYYRDIFLENFGGE
HHHHCCCHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA