| Definition | Ignicoccus hospitalis KIN4/I chromosome, complete genome. |
|---|---|
| Accession | NC_009776 |
| Length | 1,297,538 |
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The map label for this gene is 156937034
Identifier: 156937034
GI number: 156937034
Start: 207603
End: 208457
Strand: Direct
Name: 156937034
Synonym: Igni_0239
Alternate gene names: NA
Gene position: 207603-208457 (Clockwise)
Preceding gene: 156937023
Following gene: 156937038
Centisome position: 16.0
GC content: 58.48
Gene sequence:
>855_bases GTGGTTCCCGGTCGATGTCTGTCGAAGAAGGGACTTAGGTGTGATCCCCCAACATTTGAACATCCTTCCAGAAGGTCGGA GAGGTGGTCGAAACTGAGCAGTAAGGGGAGGCGTAAGAAGAGCAGCAAGGTCAAGAGGAGGCAGTGGGACCCAGCTAAGT TCGCGGAGGACGCGGCCCCCTTGGTGGCCTCCGCCCTAGGTTTGGACTCCTTGGGCTTGAGCGAGGACGAATACGTAGAG CTCTTGAGAGATATAATAGTGGGCTTGGTTGGCGACAGGGTGACCAAGCCGAAGCCGGAGAACATAATTAAAAACATAAG GAGAAACGAAAGCAGGATAATGTCAATAATAGCGTTCAAATTGTTAGAGGTAGTTCCGGAGGGCAAGCTCACGCCCGAAC AGTACGAGTTCGTAGCGGCGAACATAGGGCCTTTGGTAATACCGGTGGCCCAGCGCTTGTACAAAGAGGCCAAGAGGCTC GGGCTGGACGTCACCCCCCTCCAAGGGGCTTGGGAGGAAGGCTGGAGGCTGCGGGGCGACCCGGGGCCGGTGGGCTACTG TCCGAACTGCGGTTTCAGAGCGGTGGCCCCGGACGGGAGCTGCATGGTCTGTGGGAAGGTGCTGGACGACAAGGAGCTGA AGGAGGCGGTGGAGTTCGACGCGAAGTTCGAGGAGTTCTTGGAGACTGCGTCGTGCAACGAACTCAAGGAGGCCTTTAAG AGGGGGACCCTCTACGTCTCCCACGCCTCCACGTCCCTCGAGCCGCAGACGAAGTGGGACGTGGAGGTGTTTCTGAGCAA GAAGGAGAGGGAGGCGCTGAGGTCCGCTATCTCCCGGCGCTGTCAGCCCTCCTAA
Upstream 100 bases:
>100_bases CCAAGTCGCCGGCCATCAGGGTTAGGCGGTAGCGACCGTCAGCTTTTAATAGATGGAGGTATTTAGGGGAATGGACGTCG GAAAACGCGAGCGCTAACAA
Downstream 100 bases:
>100_bases ACTTCTCCAACGCCCCTTCGTCCACCCTGCCCTTGAACACGGCGACCACGCGCACCACGTCAGAGCCCGTGCTCAACGAT ACCTCGTTCAAGTAGGCCCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 284; Mature: 284
Protein sequence:
>284_residues MVPGRCLSKKGLRCDPPTFEHPSRRSERWSKLSSKGRRKKSSKVKRRQWDPAKFAEDAAPLVASALGLDSLGLSEDEYVE LLRDIIVGLVGDRVTKPKPENIIKNIRRNESRIMSIIAFKLLEVVPEGKLTPEQYEFVAANIGPLVIPVAQRLYKEAKRL GLDVTPLQGAWEEGWRLRGDPGPVGYCPNCGFRAVAPDGSCMVCGKVLDDKELKEAVEFDAKFEEFLETASCNELKEAFK RGTLYVSHASTSLEPQTKWDVEVFLSKKEREALRSAISRRCQPS
Sequences:
>Translated_284_residues MVPGRCLSKKGLRCDPPTFEHPSRRSERWSKLSSKGRRKKSSKVKRRQWDPAKFAEDAAPLVASALGLDSLGLSEDEYVE LLRDIIVGLVGDRVTKPKPENIIKNIRRNESRIMSIIAFKLLEVVPEGKLTPEQYEFVAANIGPLVIPVAQRLYKEAKRL GLDVTPLQGAWEEGWRLRGDPGPVGYCPNCGFRAVAPDGSCMVCGKVLDDKELKEAVEFDAKFEEFLETASCNELKEAFK RGTLYVSHASTSLEPQTKWDVEVFLSKKEREALRSAISRRCQPS >Mature_284_residues MVPGRCLSKKGLRCDPPTFEHPSRRSERWSKLSSKGRRKKSSKVKRRQWDPAKFAEDAAPLVASALGLDSLGLSEDEYVE LLRDIIVGLVGDRVTKPKPENIIKNIRRNESRIMSIIAFKLLEVVPEGKLTPEQYEFVAANIGPLVIPVAQRLYKEAKRL GLDVTPLQGAWEEGWRLRGDPGPVGYCPNCGFRAVAPDGSCMVCGKVLDDKELKEAVEFDAKFEEFLETASCNELKEAFK RGTLYVSHASTSLEPQTKWDVEVFLSKKEREALRSAISRRCQPS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31875; Mature: 31875
Theoretical pI: Translated: 9.08; Mature: 9.08
Prosite motif: PS01300 RECR
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVPGRCLSKKGLRCDPPTFEHPSRRSERWSKLSSKGRRKKSSKVKRRQWDPAKFAEDAAP CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH LVASALGLDSLGLSEDEYVELLRDIIVGLVGDRVTKPKPENIIKNIRRNESRIMSIIAFK HHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH LLEVVPEGKLTPEQYEFVAANIGPLVIPVAQRLYKEAKRLGLDVTPLQGAWEEGWRLRGD HHHHCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCEECCC PGPVGYCPNCGFRAVAPDGSCMVCGKVLDDKELKEAVEFDAKFEEFLETASCNELKEAFK CCCCCCCCCCCCEEECCCCCEEEECHHCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH RGTLYVSHASTSLEPQTKWDVEVFLSKKEREALRSAISRRCQPS HCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MVPGRCLSKKGLRCDPPTFEHPSRRSERWSKLSSKGRRKKSSKVKRRQWDPAKFAEDAAP CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH LVASALGLDSLGLSEDEYVELLRDIIVGLVGDRVTKPKPENIIKNIRRNESRIMSIIAFK HHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH LLEVVPEGKLTPEQYEFVAANIGPLVIPVAQRLYKEAKRLGLDVTPLQGAWEEGWRLRGD HHHHCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCEECCC PGPVGYCPNCGFRAVAPDGSCMVCGKVLDDKELKEAVEFDAKFEEFLETASCNELKEAFK CCCCCCCCCCCCEEECCCCCEEEECHHCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH RGTLYVSHASTSLEPQTKWDVEVFLSKKEREALRSAISRRCQPS HCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA